mRNA_H-elongata_contig123245.1756.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 101 bits (252), Expect = 4.520e-26 Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 1 DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFLKA 195
++L WW G +P L PVA+QVFGNQA AAQVERDFSGC +LLT NRSRMDTYWVEM MFL A
Sbjct: 29 EILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHA 93
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.310e-23 Identity = 44/63 (69.84%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 1 DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFL 189
+VL WW N G +P L PVA+QV GNQA AAQVERDFS C +LLT NRSR+DTYWVEM MFL
Sbjct: 104 EVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFL 166
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 1.870e-22 Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFLKA 195
+VL WW G +P L PVA+QVFGNQA+ +QVERDFSG G LL PNRSRMDTYWVE+ MFL A
Sbjct: 191 EVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNA 255
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 2.950e-22 Identity = 44/63 (69.84%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 1 DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFL 189
+VL WW N G +P L PVA+QV GNQA AAQVERDFS C +LLT NRSR+DTYWVEM MFL
Sbjct: 502 EVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFL 564
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 8.200e-21 Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFLKA 195
+VL++W G +PSL VA+Q FGNQASAA VERDFSGCG + PNRSR+D YWVEM MFLKA
Sbjct: 389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKA 453
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5KGJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ7_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 2.060e-19 Identity = 43/64 (67.19%), Postives = 47/64 (73.44%), Query Frame = -2
Query: 3 ALRNMAISTQ*VSIRLRFGVRRWPQPLKSRSTCAAEA*FPNTCSATGPRLGYCNIPLFAHQAST 194
AL N+ IS VS+RLRF V R PQPLKSRS CAAEA FPNTC ATG R+G +PL AHQ ST
Sbjct: 14 ALGNITISNPYVSVRLRFEVMRVPQPLKSRSICAAEAWFPNTCWATGARVGNWFLPLVAHQPST 77
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 2.960e-19 Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query: 40 YPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFL 189
+P L PVA+QV GNQA AAQVERDFS C +LLT NRSR+DTYWVEM MFL
Sbjct: 2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFL 51
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 9.940e-19 Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 1 DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFLKA 195
+VL++WA G +P+L VA+Q FG+Q SAA VERDFSGCG L PNRSR++ YWVEM MFL A
Sbjct: 731 EVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNA 795
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.450e-16 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 1 DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFLK 192
DVLA+W G +PSL VA+Q FG+QASAAQ+ERDFS CG T NRSR + YW+EM M LK
Sbjct: 491 DVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLK 554
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 1.120e-14 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSRMDTYWVEMAMFLKA 195
DVL +W G +P+L VA+Q FG+QA AAQ+ERDFS G L NR+R+D YWVEM +FLKA
Sbjct: 386 DVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKA 450 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123245.1756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig123245.1756.1 >prot_H-elongata_contig123245.1756.1 ID=prot_H-elongata_contig123245.1756.1|Name=mRNA_H-elongata_contig123245.1756.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp DVLAWWANKGILQYPSLGPVAEQVFGNQASAAQVERDFSGCGHLLTPNRSback to top mRNA from alignment at H-elongata_contig123245:1568..1762+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig123245.1756.1 ID=mRNA_H-elongata_contig123245.1756.1|Name=mRNA_H-elongata_contig123245.1756.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=195bp|location=Sequence derived from alignment at H-elongata_contig123245:1568..1762+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig123245:1568..1762+ >mRNA_H-elongata_contig123245.1756.1 ID=mRNA_H-elongata_contig123245.1756.1|Name=mRNA_H-elongata_contig123245.1756.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig123245:1568..1762+ (Himanthalia elongata Himel1 dioecious)back to top |