mRNA_H-elongata_contig12317.1754.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: A0A6H5JRY5_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRY5_9PHAE) HSP 1 Score: 457 bits (1176), Expect = 7.180e-144 Identity = 255/443 (57.56%), Postives = 315/443 (71.11%), Query Frame = 1
Query: 823 RVIYGIGLGLSLRCGPMYLRETVTDAFKNAATVSVKLSMVSGMIVSYIVGAVIS-NTVYGYAGALVIASISLFCLEFVLESPMYMLLHEDKFSKSKVLQAVRFTNPLAGMAEVCALQKEVMVETLSYTPDDPSYLDNAASEPHPTGGVIGGLGLGPIDRTDITDEVNNATGTVEQNPY-------------------TPELHTSTSED---YNVLPDTEKHGSMAQAVKNLPSLTKAPGMRAALVLTAGLMIFEQASGMIAILYYGGVFLADIDLISIDWGLALLGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACLTTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQRALTLKA 2082
R+I+G+GLGLSLRCGPMYLRETV + F+NAATVSVKLSMV G+I+SY++G V+S N Y G ++A SL CL+ + ESPMYMLLHE++F + ++L A+RFT+P A A++ +LQ+E++ E L+YTP PS+ GGV G G D TGT P T T E Y+ L ++EK G++A +VKNLPSLTKA GMRAALVLTAGLM+FEQASGM AILYYGGVFLADI +IS+DWGLA+LGALQL +A+ VMY +NP+GRKPLL YGL GL SS L GGFLG++ +G+W L+GLYAFTA YS SLGALVWVL+S+VFPTCHRAQAISIV +HF TSA +V+LLP++QD+GGY AMF CF VV NIFAHR+MVET+GL L+E+Q ALTLKA
Sbjct: 182 RLIFGLGLGLSLRCGPMYLRETVREPFRNAATVSVKLSMVVGVIISYVLGGVLSGNPTIAYFGVWILAGTSLACLQLMPESPMYMLLHEEQFHRGQILDALRFTSPAATEADLISLQEEILTEVLAYTPGHPSF----------AGGVHGISGDASCDGAPAVPTARAETGTATTTPXXXARGAFSXXXXXXXXXXATSSPTTGGEEGDAGYDPLDNSEKRGAVAMSVKNLPSLTKARGMRAALVLTAGLMVFEQASGMAAILYYGGVFLADIAVISVDWGLAILGALQLAMAVAVMYALNPIGRKPLLYYGLAGLMASSLMLMIGGFLGMADEGRWWALIGLYAFTASYSTSLGALVWVLVSEVFPTCHRAQAISIVGMSHFGTSAIVVILLPLVQDIGGYAAMFTCFFVVSILANIFAHRYMVETRGLTLVEIQNALTLKA 614
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: UPI000CD3E50A (sugar porter family MFS transporter n=3 Tax=Arenibacter TaxID=178469 RepID=UPI000CD3E50A) HSP 1 Score: 96.7 bits (239), Expect = 4.750e-17 Identity = 70/207 (33.82%), Postives = 117/207 (56.52%), Query Frame = 1
Query: 1465 PGMRAALVLTAGLMIFEQASGMIAILYYGGVFLADIDLISIDWGLAL---LGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLS----SACLTTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQR 2064
PG+R AL++ GL +F Q +G+ I+YYG L D +D L +G + L+ I+ ++ I+ GR+PLL++G+ +F+S +A +TG GI W+V++ L + A +IS+ A++WVLI ++FPT R +A+SI + A++ + L P D G A F F + IF +R++ ETKG +L E+++
Sbjct: 265 PGLRLALIVGVGLSVFGQFTGVNIIVYYGPTILEDAGF-QLDSALQFQVAIGIINLIFTIIALWKIDSWGRRPLLIWGMSAVFISLIIIAALFSTGQTSGI-----WIVIM-LCVYMASLAISINAVIWVLIGEIFPTRIRGRAMSIATFANWGINFLTAFLFPWYVDKIGVGAGFFTFAFMCLIATIFFYRYVPETKGKSLEEIEQ 464
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: A0A7Y1YF88_9BACT (Sugar porter family MFS transporter n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y1YF88_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 6.520e-17 Identity = 74/220 (33.64%), Postives = 126/220 (57.27%), Query Frame = 1
Query: 1411 KHGSMAQAVKNLPSLTKAPGMRAALVLTAGLMIFEQASGMIAILYYGGVFL--ADIDLISIDWGLALLGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACLTTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQR 2064
KH S+ Q N+ L + PG+R AL++ GL +F Q SG+ I+YYG L A L S +G + L+ I+ ++ I+ GR+PLL+ G+M + +S + LG + DG W+V++ L + A +IS+ A++WVL+ ++FPT R +A++I + A++ T+ L P + G A F F ++ F +F ++F+ ETKG +L E+++
Sbjct: 248 KH-SVEQLKGNIRELFR-PGLRLALLVGVGLSVFGQFSGVNIIIYYGPTILEGAGFKLESALQFQVAIGMINLLFTIIALWKIDHWGRRPLLIGGMMAVTISLVIIAVQFSLGKT-DGIWIVIM-LCVYMASLAISINAVIWVLMGEIFPTRIRGRAMAIATFANWGTNFLTAFLFPWYVERIGMGAGFFTFSIMCLFAVLFFYKFVPETKGKSLEEIEQ 463
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: A0A830F3Q8_9EURY (Putative metabolite transport protein YwtG n=29 Tax=Haloarcula TaxID=2237 RepID=A0A830F3Q8_9EURY) HSP 1 Score: 95.5 bits (236), Expect = 1.010e-16 Identity = 67/203 (33.00%), Postives = 116/203 (57.14%), Query Frame = 1
Query: 1462 APGMRAALVLTAGLMIFEQASGMIAILYYGGVFLADIDLISIDWGLAL--LGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACLTTGGFL-GISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQ 2061
AP +R ALV+ GL +F+Q +G+ A++YY L L S+ LA +G + +V+ IV + ++ VGR+ LLL G+ G+ + A L T +L G+ G + + L F +F++I LG + W+LIS+++P R A+ +V+ A++ + + + PV+ D G +A F F + G +F +R++ ETKG L ++
Sbjct: 246 APWLRPALVVGLGLAVFQQITGINAVIYYAPTILESTGLGSVASILATVGIGTINVVMTIVAIMLVDRVGRRRLLLVGVGGMVATLAVLGTVFYLPGLGGGLGIIATISLMLFVSFFAIGLGPVFWLLISEIYPLSVRGSAMGVVTVANWGANLLVSLTFPVLTDGVGTSATFWLFGLCSLVGLLFVYRYVPETKGRTLEAIE 448
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: A0A1G9YHN9_9FLAO (MFS transporter, sugar porter (SP) family n=1 Tax=Kriegella aquimaris TaxID=192904 RepID=A0A1G9YHN9_9FLAO) HSP 1 Score: 94.4 bits (233), Expect = 2.600e-16 Identity = 64/202 (31.68%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 1465 PGMRAALVLTAGLMIFEQASGMIAILYYGGVFL--ADIDLISIDWGLALLGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACLTTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQR 2064
PG+R AL++ GL +F Q +G+ I+YYG L A L S +G + L+ I+ ++ I+ GR+PLL++G+ G+F+S + T + G + W++++ L + A + S+ A++WVLI ++FPT R +A+SI + A++ + L P + G +A F F + +F ++++ ETKG +L E++R
Sbjct: 258 PGLRLALIVGVGLSVFGQFTGVNIIVYYGPTILESAGFKLDSALQFQVAIGVINLIFTIIALWKIDSWGRRPLLIWGMAGVFVSLMIIATLFYTGQTSS-IWIIIM-LCVYMACLAFSINAVIWVLIGEIFPTSIRGRAMSIATFANWGINFLTAFLFPWYVNEIGMSAGFFTFAGMCLLATLFFYKYLPETKGKSLEEIER 457
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: UPI001C99FD1F (sugar porter family MFS transporter n=1 Tax=Membranicola marinus TaxID=1227546 RepID=UPI001C99FD1F) HSP 1 Score: 93.6 bits (231), Expect = 4.850e-16 Identity = 105/415 (25.30%), Postives = 180/415 (43.37%), Query Frame = 1
Query: 823 RVIYGIGLGLSLRCGPMYLRETVTDAFKNAATVSVKLSMVSGMIVSYIVGAVISNTVYGYAGALVIASISLFCLEFVLESPMYMLLHEDKFSKSKVLQAVRFTNPLAGMAEVCALQKEVMVETLSYTPDDPSYLDNAASEPHPTGGVIGGLGLGPIDRTDITDEVNNATGTVEQNPYTPELHTSTSEDYNVLPDTEKHGSMAQAVKNLPSLTKAPGMRAALVLTAGLMIFEQASGMIAILYYGGVFL--ADIDLISIDWGLALLGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACLTTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQ 2061
R++ G+G+G++ P+Y+ E + + S+V G++++Y ++ + G G + LF FV E + F+ + + F LA P+ P +L N E G I G +DR +T + N + +K G +K L PG R AL + GL +F Q +G+ ++YYG L A L + L+G + L+ I+ ++ I+ GR+PLL+ G++ +F+S C F G G W V++ L + A ++S+ A++WVLI +++PT R QA+SI + A++TT+ L P ++ G F F G +F R++ ETKG +L E++
Sbjct: 121 RLLGGVGVGMASVLSPLYISEFAPARIRGRLVAMYQFSIVVGILLAYFSNWLLLSNAGGEMGG---GTYGLFHKVFVAE------IWRGMFAAEMIPSGLFFLLLLA-------------------VPESPRWLINQGKEDR--GWAILERINGKVDRVLLTSKANE--------------------------EAQKLG-----IKTLFQ----PGWRKALAVGVGLSVFGQFTGVNIVIYYGPTILESAGYALSNAVQFQVLIGLINLLFTIIALFKIDSWGRRPLLIGGMISVFIS-LCGLGVLFTGSESSGIWAVVI-LCIYIASLALSINAVIWVLIGEIYPTHIRGQAMSIATFANWTTNFAAAFLFPWYVNIVGMGMGFFTFAGFSLLGILFFFRYVPETKGKSLEEIE 468
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: A0A256JDQ6_9EURY (MFS transporter (Fragment) n=1 Tax=Halorubrum sp. E3 TaxID=1483400 RepID=A0A256JDQ6_9EURY) HSP 1 Score: 90.5 bits (223), Expect = 1.440e-15 Identity = 68/205 (33.17%), Postives = 107/205 (52.20%), Query Frame = 1
Query: 1465 PGMRAALVLTAGLMIFEQASGMIAILYYGGVFLADIDLISIDWGLA--LLGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACL-TTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQRAL 2070
P MR AL++ GL +F+Q +G+ A++YY L S LA +G + + + IV + ++ VGR+PLLL G G+ S A F +G WL L L +F AF++I LG + W+LIS+++P R A+ +V+ A++ + + + PV+ D G A F F +F HR + ETKG L ++ L
Sbjct: 134 PWMRPALIVGLGLAVFQQVTGINAVMYYAPTILESTAFGSSQSILASVFIGTVNVAMTIVAILLVDRVGRRPLLLVGTGGMIGSLAVAGLVFQFADPTGGVGWLATLTLVSFVAFFAIGLGPVFWLLISEIYPLAVRGSAMGLVTVANWLANLAVALSFPVLLDGIGTPATFWLFGGCSVVALLFTHRTVPETKGRTLEAIEADL 338
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: UPI001EFF7F39 (sugar porter family MFS transporter n=1 Tax=Sabulilitoribacter arenilitoris TaxID=2044858 RepID=UPI001EFF7F39) HSP 1 Score: 89.7 bits (221), Expect = 8.560e-15 Identity = 64/201 (31.84%), Postives = 112/201 (55.72%), Query Frame = 1
Query: 1465 PGMRAALVLTAGLMIFEQASGMIAILYYGGVFL--ADIDLISIDWGLALLGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACLTTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQ 2061
PG+R AL++ GL +F Q +G+ I+YYG L A L S +G + L+ ++ ++ I+ GR+PLL++G+ + +S + T +G + G W+V++ L + A +IS+ A++WVLI ++FPT R +A+SI + A++ + + P G A F F + IF +R++ ETKG +L E++
Sbjct: 265 PGLRLALIVGVGLSVFGQFTGVNIIVYYGPTILESAGFKLDSALQFQVAIGIINLIFTVIALWKIDSWGRRPLLIWGMASVCVSLFIIATQFLIGQT-SGIWIVIM-LCIYMASLAISINAVIWVLIGEIFPTRIRGRAMSIATFANWGINFLTAFIFPWYVAKIGMAAGFFTFAAMCLLATIFFYRYVPETKGKSLEEIE 463
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: UPI001CBF8F15 (sugar porter family MFS transporter n=1 Tax=Aestuariivivens sp. NBU2969 TaxID=2873267 RepID=UPI001CBF8F15) HSP 1 Score: 89.7 bits (221), Expect = 8.610e-15 Identity = 66/222 (29.73%), Postives = 119/222 (53.60%), Query Frame = 1
Query: 1402 DTEKHGSMAQAVKNLPSLTKAPGMRAALVLTAGLMIFEQASGMIAILYYGGVFL--ADIDLISIDWGLALLGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACLTTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDVGGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQ 2061
D G +++ +K PG+R AL++ GL +F Q +G+ I+YYG L A L S +G + L+ I+ ++ I+ GR+PLL++G+ +F+S + T +G + G W+V++ L + A +IS+ A++WVLI ++FPT R +A+SI + ++ + + P G A F F + +F +R++ ET+G +L E++
Sbjct: 261 DNHVKGKISELIK--------PGLRLALIVGVGLSVFGQFTGVNIIVYYGPTILESAGFKLDSALQFQVAIGIINLIFTIIALWKIDSWGRRPLLIWGMASVFVSLFIIATQFLIGQT-SGIWIVIM-LSVYMASLAISINAVIWVLIGEIFPTRIRGRAMSIATFVNWGINFLTAFVFPWYVAKIGMAAGFFTFAAMCLLATMFFYRYVPETRGKSLEEIE 472
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Match: UPI001FAC5B91 (sugar porter family MFS transporter n=1 Tax=Parabacteroides sp. AGMB00274 TaxID=2924040 RepID=UPI001FAC5B91) HSP 1 Score: 87.8 bits (216), Expect = 9.960e-15 Identity = 62/198 (31.31%), Postives = 109/198 (55.05%), Query Frame = 1
Query: 1483 LVLTAGLMIFEQASGMIAILYYG-GVFL-ADIDLISIDWGLALLGALQLVIAIVVMYTINPVGRKPLLLYGLMGLFLSSACLTTGGFLGISGDGKWLVLLGLYAFTAFYSISLGALVWVLISDVFPTCHRAQAISIVSTAHFTTSATMVVLLPVMQDV--GGYTAMFLCFMVVVFFGNIFAHRFMVETKGLNLLEVQR 2064
+V+ + +F Q SG+ ++YY +F A D + ++G LV ++ I+ +GR+ LLL G MG+F+S + LT F ++G W++LL L F A ++ S+GA+ WVL+S++FP R+Q +S+ S +++ + T+ L P++ G FL F + +F F R++ ETK L E+++
Sbjct: 144 IVIGLAVGVFSQLSGIAIVMYYATDIFRSAGFDTDAAIGQTVIIGLTNLVFTLLAKSLIDRLGRRRLLLTGTMGMFVSLSLLTASYF--VAGFPSWVLLLSLICFVACFASSMGAVSWVLLSEIFPNTIRSQGMSLGSLSNWMVNGTISFLFPIVAGAFDQGQKYCFLFFALSIFISYFFFRRYLFETKNKTLEEIEK 339 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12317.1754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12317.1754.1 >prot_H-elongata_contig12317.1754.1 ID=prot_H-elongata_contig12317.1754.1|Name=mRNA_H-elongata_contig12317.1754.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=418bp MYLRETVTDAFKNAATVSVKLSMVSGMIVSYIVGAVISNTVYGYAGALVIback to top mRNA from alignment at H-elongata_contig12317:470..7626+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12317.1754.1 ID=mRNA_H-elongata_contig12317.1754.1|Name=mRNA_H-elongata_contig12317.1754.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7157bp|location=Sequence derived from alignment at H-elongata_contig12317:470..7626+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12317:470..7626+ >mRNA_H-elongata_contig12317.1754.1 ID=mRNA_H-elongata_contig12317.1754.1|Name=mRNA_H-elongata_contig12317.1754.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2508bp|location=Sequence derived from alignment at H-elongata_contig12317:470..7626+ (Himanthalia elongata Himel1 dioecious)back to top |