mRNA_H-elongata_contig122851.1739.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: D7FYI3_ECTSI (Hsp90 chaperone protein kinase-targeting subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYI3_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 7.050e-21 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARL 144
CLEDEMNGKH+RMKLVARQSQLLSSITELAVSLRRPPQDVVPALF RL
Sbjct: 225 CLEDEMNGKHERMKLVARQSQLLSSITELAVSLRRPPQDVVPALFLRL 272
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: A0A836C784_9STRA (Hsp90 chaperone protein kinase-targeting subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C784_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.290e-15 Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARL 144
CLEDEMNGKH R +LVARQSQ+LS+ITELAV LRRPPQDVV F RL
Sbjct: 225 CLEDEMNGKHTRAQLVARQSQMLSNITELAVGLRRPPQDVVIPFFRRL 272
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: A0A7S2XXR3_9STRA (Hsp90 chaperone protein kinase-targeting subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.450e-12 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARLK 147
CLEDEMN KHDRMK VA QSQ+LSSITELA S+ R P+DVV F R++
Sbjct: 243 CLEDEMNAKHDRMKKVAHQSQILSSITELAASMDRHPRDVVIPFFKRVQ 291
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: W7TC69_9STRA (Hsp90 chaperone protein kinase-targeting subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC69_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 6.350e-12 Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARLK 147
CLEDEMNGKH RMK ARQSQ+LS ITELA SL R P+DVV F RL+
Sbjct: 268 CLEDEMNGKHARMKNTARQSQILSHITELAHSLDRSPRDVVVPFFRRLQ 316
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: A0A7R9YE37_9STRA (Hsp90 chaperone protein kinase-targeting subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE37_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 8.740e-12 Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARLKVSQ 156
CLEDEMNG H RM+L ARQSQ+LS+I ELA S+ R P+D++ A F +++ Q
Sbjct: 305 CLEDEMNGNHSRMRLCARQSQILSNIAELAKSMNRHPRDILDAFFVKMREGQ 356
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: F0Y5X3_AURAN (Hsp90 chaperone protein kinase-targeting subunit (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5X3_AURAN) HSP 1 Score: 65.5 bits (158), Expect = 5.170e-11 Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARLKVSQ 156
CLEDEMNG HD+M L AR SQ+LS +TELA SL+R P+DVV F R+ Q
Sbjct: 190 CLEDEMNGYHDKMVLSARNSQILSHVTELATSLQRHPRDVVLPFFKRIAEEQ 241
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: A0A7S2FGF6_9STRA (Hsp90 chaperone protein kinase-targeting subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FGF6_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.400e-10 Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARL 144
CLE+EMNG H++M VARQSQ+LS ITELA SL+R P+DVV F R+
Sbjct: 226 CLEEEMNGNHEKMMHVARQSQILSHITELAGSLKRAPRDVVLPFFRRI 273
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: A0A7S2L4Z6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L4Z6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.480e-10 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 4 LEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARLKVSQL 159
LEDEMNG H++MKLVARQSQ++S+I ELA SL+R P +V+ F R++ QL
Sbjct: 31 LEDEMNGFHEKMKLVARQSQIVSNIAELAKSLQRHPGNVIVPFFQRMEDKQL 82
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: A0A7S3NDY3_9STRA (Hsp90 chaperone protein kinase-targeting subunit n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NDY3_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.700e-10 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARLKVSQLVT 165
CLEDEMNG H++MK A+ SQLL+ ITELAVS+ R P+DVV F R++ S ++
Sbjct: 231 CLEDEMNGFHEKMKRAAQNSQLLAHITELAVSMNRHPRDVVLPFFHRIQDSNYLS 285
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Match: A0A7S3ZZQ4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZQ4_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 8.580e-10 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 1 CLEDEMNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARLK 147
CLEDEMNG D+MKL +R SQ+LS +T+LA SL R P+DVV F+R++
Sbjct: 171 CLEDEMNGFPDKMKLASRNSQVLSHVTDLAASLNRHPRDVVLPFFSRIE 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122851.1739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig122851.1739.1 >prot_H-elongata_contig122851.1739.1 ID=prot_H-elongata_contig122851.1739.1|Name=mRNA_H-elongata_contig122851.1739.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp MNGKHDRMKLVARQSQLLSSITELAVSLRRPPQDVVPALFARLKVSQLVTback to top mRNA from alignment at H-elongata_contig122851:1618..1797- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig122851.1739.1 ID=mRNA_H-elongata_contig122851.1739.1|Name=mRNA_H-elongata_contig122851.1739.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=180bp|location=Sequence derived from alignment at H-elongata_contig122851:1618..1797- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig122851:1618..1797- >mRNA_H-elongata_contig122851.1739.1 ID=mRNA_H-elongata_contig122851.1739.1|Name=mRNA_H-elongata_contig122851.1739.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=330bp|location=Sequence derived from alignment at H-elongata_contig122851:1618..1797- (Himanthalia elongata Himel1 dioecious)back to top |