mRNA_H-elongata_contig122740.1734.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: D7FW04_ECTSI (Magnesium chelatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW04_ECTSI) HSP 1 Score: 283 bits (723), Expect = 6.860e-84 Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 2
Query: 317 DKFKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
DKFKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGML+SGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFR
Sbjct: 1243 DKFKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLASGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRDT 1390
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A7S2V5U8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5U8_9STRA) HSP 1 Score: 260 bits (664), Expect = 5.740e-81 Identity = 132/149 (88.59%), Postives = 140/149 (93.96%), Query Frame = 2
Query: 314 VDKFKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
VD FK +LK VDVTFQNLDSSEISLTDVSHYYDSDPTKVV SLRDDKKKP SF+ADTTTANAQVR+LSETVRLDARTKLLNPKFYEGML+SGYEGTREITKRLRNTMGW+ATAGEVDNFI+EDAND FIKDEEMR RLM+ NPNAFR +
Sbjct: 299 VDLFKSSLKKVDVTFQNLDSSEISLTDVSHYYDSDPTKVVQSLRDDKKKPGSFVADTTTANAQVRSLSETVRLDARTKLLNPKFYEGMLNSGYEGTREITKRLRNTMGWSATAGEVDNFIYEDANDTFIKDEEMRQRLMDTNPNAFRDM 447
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A7R9Y993_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y993_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.960e-78 Identity = 128/179 (71.51%), Postives = 144/179 (80.45%), Query Frame = 2
Query: 254 WSNRQDNII*YIIYDIFSFSVDK----------FKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
W N Q ++ F+F+ D+ FK AL TVDVTFQNLDSSEISLTDVSHYYDSDPTKVV LR D +KPS+ MADTTTANAQVRTLSETVRLDARTKLLNPKFYEGML+SGYEG REITKRLRNTMGW+ATAG+VDNFI+EDAND FI D++MR RL++ NPNAFR +
Sbjct: 43 WENEQQLQTQFLERKGFAFNADRPGMMEQQADMFKKALSTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVQGLRKDGRKPSAMMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLNSGYEGAREITKRLRNTMGWSATAGDVDNFIYEDANDTFIADDQMRQRLLDTNPNAFRDM 221
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A7R9WRJ5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRJ5_9STRA) HSP 1 Score: 242 bits (617), Expect = 9.470e-78 Identity = 122/148 (82.43%), Postives = 132/148 (89.19%), Query Frame = 2
Query: 317 DKFKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
D FK ALK VDVTFQNLDSSEIS+TDVSHYYDSDPTKVV LRDD +KP S MADTTTANAQVRTLSETVRLDARTKLLNPKFYEGML +GYEG REI KRLRNTMGW+ATAGEVDNF+FEDAN VFI+D EM+ RL++ NPNAFR +
Sbjct: 6 DLFKSALKNVDVTFQNLDSSEISITDVSHYYDSDPTKVVQGLRDDGRKPMSLMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLGTGYEGVREIQKRLRNTMGWSATAGEVDNFVFEDANSVFIEDAEMQQRLLDTNPNAFRDM 153
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A7S1GIZ2_CYCTE (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1GIZ2_CYCTE) HSP 1 Score: 245 bits (625), Expect = 5.540e-77 Identity = 127/163 (77.91%), Postives = 139/163 (85.28%), Query Frame = 2
Query: 302 FSFSVDK----------FKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
F+F+ DK FK ALK VDVTFQNLDSSEIS+TDVSHYYDSDPTKVV LRDDKKKP S MADTTTANAQVR+L+ETVRLDARTKLLNPKFYEGMLS+GYEG REI KRLRNTMGW+ATAGEVDNF+FEDAN VFI DEEM+ RL++ NPNAFR +
Sbjct: 133 FAFNADKPGMMEAQADLFKAALKKVDVTFQNLDSSEISITDVSHYYDSDPTKVVQGLRDDKKKPMSLMADTTTANAQVRSLAETVRLDARTKLLNPKFYEGMLSTGYEGVREIQKRLRNTMGWSATAGEVDNFVFEDANSVFIDDEEMQRRLLDTNPNAFRDM 295
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A835YVC9_9STRA (Magnesium chelatase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC9_9STRA) HSP 1 Score: 263 bits (672), Expect = 5.780e-77 Identity = 133/150 (88.67%), Postives = 141/150 (94.00%), Query Frame = 2
Query: 311 SVDKFKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
+VD F+ ALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVV LRDD+KKP SFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGML+SGYEG REITKRLRNTMGW+ATAGEVDNFI+EDANDVFIKDEEMR RL+N NPNAFR +
Sbjct: 1230 NVDMFQAALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVQGLRDDRKKPMSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLNSGYEGAREITKRLRNTMGWSATAGEVDNFIYEDANDVFIKDEEMRQRLLNTNPNAFRDM 1379
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A7S2H1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H1B0_9STRA) HSP 1 Score: 246 bits (628), Expect = 7.910e-76 Identity = 127/163 (77.91%), Postives = 140/163 (85.89%), Query Frame = 2
Query: 302 FSFSVDK----------FKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
F+F+ DK FK ALKTVDVTFQNLDSSEIS+TDVSHYYDSDPTKVV LRDDKKKP S MADTTTANAQVR+L+ETVRLDARTKLLNPKFYEGMLS+GYEG REI KRLRNTMGW+ATAGEVDNF+FEDAN VFI+D EM+ RL++ NPNAFR +
Sbjct: 281 FAFNADKPGMMEQQADLFKSALKTVDVTFQNLDSSEISITDVSHYYDSDPTKVVQGLRDDKKKPMSLMADTTTANAQVRSLAETVRLDARTKLLNPKFYEGMLSTGYEGVREIQKRLRNTMGWSATAGEVDNFVFEDANSVFIEDAEMQQRLLDQNPNAFRDM 443
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A7S3EZD7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EZD7_9EUKA) HSP 1 Score: 243 bits (621), Expect = 1.080e-73 Identity = 125/163 (76.69%), Postives = 140/163 (85.89%), Query Frame = 2
Query: 302 FSFSVDK----------FKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
F+F+ DK FK +LK VDVTFQNLDSSEISL+DVSHY+DSDPTKVV+ LR D KKPSSF+ADTTTANAQVRTLSETVRLD+RTKLLNPKFYEGML SGYEGTREITKRLRNTMGW+ATAG VDNF++EDAND+FI DEEM+ RL+ NPNAFR +
Sbjct: 365 FAFNADKPGVLDAAGDVFKSSLKRVDVTFQNLDSSEISLSDVSHYFDSDPTKVVAGLRTDGKKPSSFVADTTTANAQVRTLSETVRLDSRTKLLNPKFYEGMLKSGYEGTREITKRLRNTMGWSATAGAVDNFVYEDANDIFIADEEMQQRLLETNPNAFRDM 527
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A6U1BMC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BMC3_9STRA) HSP 1 Score: 241 bits (614), Expect = 1.650e-73 Identity = 122/148 (82.43%), Postives = 132/148 (89.19%), Query Frame = 2
Query: 317 DKFKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
D FK ALKTVD TFQNLDSSEISLTDVSHY+DSDPTKVV LR DKKKP S +ADTTTANAQVR+L ETVRLDARTKLLNPKFYEGML+SGYEGTREITKRLRNTMGW+AT+G VDNFI+EDANDVFI DE M+ RL+ NPNAFR +
Sbjct: 296 DMFKSALKTVDCTFQNLDSSEISLTDVSHYFDSDPTKVVQGLRGDKKKPMSMIADTTTANAQVRSLGETVRLDARTKLLNPKFYEGMLASGYEGTREITKRLRNTMGWSATSGTVDNFIYEDANDVFIADEAMQQRLLETNPNAFRDM 443
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Match: A0A7S2TY07_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY07_9EUKA) HSP 1 Score: 231 bits (589), Expect = 1.730e-73 Identity = 116/146 (79.45%), Postives = 130/146 (89.04%), Query Frame = 2
Query: 323 FKMALKTVDVTFQNLDSSEISLTDVSHYYDSDPTKVVSSLRDDKKKPSSFMADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLSSGYEGTREITKRLRNTMGWAATAGEVDNFIFEDANDVFIKDEEMRDRLMNLNPNAFRQV 760
FK +L VDVTFQNLDSSEISL+DVSHY+DSDPTKVV LR D KKPS+F+ADTTTANAQVRTLSETVRLDARTKLLNPKFYEGML+ GYEG REITKRLRNTMGW+ATAG VDNF++EDAN+VFI D M+ RL++ NPNAFR +
Sbjct: 8 FKASLSKVDVTFQNLDSSEISLSDVSHYFDSDPTKVVQGLRKDGKKPSAFVADTTTANAQVRTLSETVRLDARTKLLNPKFYEGMLNQGYEGAREITKRLRNTMGWSATAGAVDNFVYEDANEVFISDPAMQKRLLDTNPNAFRDM 153 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122740.1734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig122740.1734.1 >prot_H-elongata_contig122740.1734.1 ID=prot_H-elongata_contig122740.1734.1|Name=mRNA_H-elongata_contig122740.1734.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp MAAEADEPEDMNFVRKHAVEQAREFGLSIRDAATRVFSNSAGSYSANVGLback to top mRNA from alignment at H-elongata_contig122740:140..1918- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig122740.1734.1 ID=mRNA_H-elongata_contig122740.1734.1|Name=mRNA_H-elongata_contig122740.1734.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1779bp|location=Sequence derived from alignment at H-elongata_contig122740:140..1918- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig122740:140..1918- >mRNA_H-elongata_contig122740.1734.1 ID=mRNA_H-elongata_contig122740.1734.1|Name=mRNA_H-elongata_contig122740.1734.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=582bp|location=Sequence derived from alignment at H-elongata_contig122740:140..1918- (Himanthalia elongata Himel1 dioecious)back to top |