mRNA_H-elongata_contig122463.1717.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A6H5KPB7_9PHAE (TAF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPB7_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.010e-44 Identity = 89/130 (68.46%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 1 QVSEVSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENPIPSSARG 390
QV EVS +V+ F+SASAEYHLLD+++DAS FR+RGKRSRLTVDDV ASLELRG E+SLV G S S + AT AD KVDLRKVANA+LPVCP+EPGF MHWLAV+G QPLL +NP+PSS RG
Sbjct: 22 QVGEVSEDVLSFLSASAEYHLLDVINDASNFRARGKRSRLTVDDVTASLELRGAETSLVCAG-----GGSKSKDSDDSAT-ADGKVDLRKVANATLPVCPIEPGFHMHWLAVDGQQPLLPQNPLPSSGRG 145
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A835YRS7_9STRA (TAF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 4.810e-19 Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 1
Query: 4 VSEVSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIES----------SLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENP 369
V VS +V F+++SAEYHL D++ +A R KR R+T DDVN +LE+R +E+ + V +GE ATG D +V+ +VANA LP CP+EP +HWLAV+G QP + +NP
Sbjct: 16 VGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATG-DRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP 146
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A507C5H7_9FUNG (TAF domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C5H7_9FUNG) HSP 1 Score: 84.7 bits (208), Expect = 1.130e-16 Identity = 46/125 (36.80%), Postives = 70/125 (56.00%), Query Frame = 1
Query: 13 VSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENPIPSSAR 387
V P + + A AEY L +I+ +A+ F + GKR +LT +D+N +L +R +E+ G S S S K+ AD +VDL +V A LP P+ + HWLA+ GVQP + +NP P+ +
Sbjct: 20 VRPEIATRLLADAEYRLREIICEAAKFMNHGKRRKLTTEDINQALRVRNVEALYGFGPGTNSKFRSTSTAQ-KLFYAADHEVDLEEVIAAPLPPVPLHVAYTGHWLAINGVQPSIVQNPTPAELK 143
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A8H7UCA0_9FUNG (TAF domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UCA0_9FUNG) HSP 1 Score: 84.3 bits (207), Expect = 1.670e-16 Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 37 MSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENPIPSSAR 387
++ +Y L +I+ +A+ F KRSRLTVDD+NA+L +R +E G + + M + D +VD + N LP P++ F HWLA+EGVQP + +NP PS A+
Sbjct: 29 LAHDVDYRLQEIIQEATKFMRHSKRSRLTVDDINAALRVRNVEPLYGFTSGNPLRFKKTTANMNDIYYVGDEEVDFDTILNKPLPRVPLDVTFTAHWLAIEGVQPAIPQNPTPSDAK 145
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A507DQ29_9FUNG (TAF domain-containing protein n=3 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DQ29_9FUNG) HSP 1 Score: 83.2 bits (204), Expect = 5.550e-16 Identity = 48/125 (38.40%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 13 VSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENPIPSSAR 387
V P V + A AEY L +I+ +A+ F GKR +LT +D+N +L +R +E G S S S K+ AD +VDL +V A LP P+ + HWLA+ GVQP + +NP P+ R
Sbjct: 2666 VRPEVATRLLADAEYRLREIICEAAKFMRHGKRRKLTTEDINQALRVRNVEPLYGYGPGTNSKFRSTS-TAHKLFYAADHEVDLEEVIAAPLPPVPLSVQYTGHWLAINGVQPSIVQNPTPAELR 2789
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A8H7PFS0_MORIS (TAF domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PFS0_MORIS) HSP 1 Score: 82.0 bits (201), Expect = 1.110e-15 Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 37 MSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENPIPSSAR 387
++ +Y L +I+ +A F KR+RLTVDD+NA+L +R +E G + + M+ + D +VD + N LP P++ F HWLA+EGVQP + +NP P+ A+
Sbjct: 32 LAHDVDYRLQEIIQEAVKFMRHSKRTRLTVDDINAALRVRNVEPLYGFTSGDPLRFKKTTANMSDIYYVGDDEVDFDTILNKPLPKVPLDVTFTAHWLAIEGVQPAIPQNPTPADAK 148
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A163LPB4_ABSGL (TAF domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163LPB4_ABSGL) HSP 1 Score: 81.6 bits (200), Expect = 1.310e-15 Identity = 41/128 (32.03%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 4 VSEVSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENPIPSSAR 387
+S + +V + +Y + +++ +A+ F KRS+LTVDD+NA+L ++ +E G S + + D +VD + N LP P++ F HWLA+EGVQP + +NP PS A+
Sbjct: 18 ISNLKDDVATALGQDVDYRVQELIQEATKFMQHSKRSKLTVDDINAALRVKNVEPLYGYGCGEASKFRRTTVNNNNIYFTDDEEVDFDTILNKPLPKIPLDVSFTAHWLAIEGVQPAIPQNPTPSDAK 145
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A367JIX6_RHIAZ (TAF domain-containing protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367JIX6_RHIAZ) HSP 1 Score: 81.6 bits (200), Expect = 1.490e-15 Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 4 VSEVSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENPIPSSAR 387
++ + + ++ EY + +++ +AS F KR +LTVDDVNA+L ++ +E G T + ++ D ++D V N LP P++ F HWLA+EGVQP + +NP P+ A+
Sbjct: 18 INNLKDEIATALAQDVEYRIHELIQEASKFMRHSKRVKLTVDDVNAALRVKNVEPLYGYTHGETPKFRKTTLNSTEIYFDEDEEIDFDSVLNKPLPKIPLDVTFTAHWLAIEGVQPAIPQNPTPNDAK 145
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: A0A1S4BIW5_TOBAC (transcription initiation factor TFIID subunit 6-like n=6 Tax=Nicotiana TaxID=4085 RepID=A0A1S4BIW5_TOBAC) HSP 1 Score: 81.6 bits (200), Expect = 1.690e-15 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 4 VSEVSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDDGVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENPIPSS 381
VS +SP+V+P +SA EY + +I+ +A KR+ L+ DDV+A+L LRG+E + G A+G + + V+L+ V A LP P++ HWLA++GVQP + ENP P +
Sbjct: 18 VSNLSPDVLPALSADVEYRIREIMQEAIKCMRHSKRTTLSTDDVDAALSLRGVEPIYGLASGDPLRFRRAAGHK-DLFYIEEKDVELKDVIEAPLPKAPLDTAIVAHWLAIDGVQPAIPENPPPEA 142
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Match: M1VCU7_CYAM1 (TATA-box binding protein-associated factor 6 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VCU7_CYAM1) HSP 1 Score: 81.3 bits (199), Expect = 2.110e-15 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 1
Query: 4 VSEVSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLELRGIESSLVIDD-------GVTSLGESASGEMAKVATGADVKVDLRKVANASLPVCPMEPGFDMHWLAVEGVQPLLAENP--IPSSAR 387
++ + +V +++ AEY L +I+ +A F KR RL D+ A+L LR +E GVT GES+ G V D +VDLR + + LP P+E +HWLA+EG+QP + +NP + S+AR
Sbjct: 33 IARLREDVAAYLATDAEYRLREIIQEAGKFMRHSKRRRLKTSDIAAALRLRNLEPLYGFSSNESAPFVGVTLPGESSLGGSNTVYFVGDEEVDLRDILDGELPRVPLETTLALHWLAIEGIQPRIPQNPADVSSTAR 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122463.1717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig122463.1717.1 >prot_H-elongata_contig122463.1717.1 ID=prot_H-elongata_contig122463.1717.1|Name=mRNA_H-elongata_contig122463.1717.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=130bp QVSEVSPNVIPFMSASAEYHLLDILHDASMFRSRGKRSRLTVDDVNASLEback to top mRNA from alignment at H-elongata_contig122463:660..1553+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig122463.1717.1 ID=mRNA_H-elongata_contig122463.1717.1|Name=mRNA_H-elongata_contig122463.1717.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=894bp|location=Sequence derived from alignment at H-elongata_contig122463:660..1553+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig122463:660..1553+ >mRNA_H-elongata_contig122463.1717.1 ID=mRNA_H-elongata_contig122463.1717.1|Name=mRNA_H-elongata_contig122463.1717.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=780bp|location=Sequence derived from alignment at H-elongata_contig122463:660..1553+ (Himanthalia elongata Himel1 dioecious)back to top |