mRNA_H-elongata_contig12233.1707.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12233.1707.1
Unique NamemRNA_H-elongata_contig12233.1707.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: D7G7L5_ECTSI (RanBP, RRM1, C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L5_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 7.150e-102
Identity = 295/551 (53.54%), Postives = 332/551 (60.25%), Query Frame = 1 
Query:   67 RRSDWECSKCRALNFARRDHCFGCGAPIGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARSTGGSSXXXXXXXLTVGGVKVSLSYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSASSETALKAFQGRQTAVRLAKLEGAEAGEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------GGAGEVGVRVGAVSLGGMVGTAGNEAGSDGAPPEVVNAALEKKLNPPLWPQSFEEDGAAYLFDGPSGYFYESSTXXXYDPKSKLYCKDMRWHQHVPGQDPAFVPVEQEGTAYQDEAQDQNAVRTVDPIPVGGASTDAQAQVQATARLNGSGAKPAAAAKPVGNSVGGNRSKGIGGKKQRIAFGFKGIKLAKPGAGS-------VVGAAVG--SEDXXXXXXXXXXXXXXXXXXSGPGG-LAKKRRLEDLSKWKARKLEAAEK----AVDDKGKAPEPLHIAPRLQRKEP------TYDPPAPLLPPL 1599
            +R+DWECSKC  LNFARRD CFGCGA +G+G+ ++IPTNVLRVSGLR +T +E+VV ALKPFAPVKDA LAVHP T +SLRAC+VEF SVE AQHTL+TA   G          LT+ G   SLSYAA     XXXXXXXXXXXXXXXXXXXXX     VSASS TALKAFQGRQ A RLAKLEG EA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    GG         A++    V T G  AGS+GA PE V AAL+KKLNPP WP  FEE GAAYLFDGPSGYFYES+T   YDP+SKLYCK M W+ H PGQDPAF PV Q+G     +A+   A    + + VG A+                                    K       R+AFGFKG KLAK  AG        V+G A    S D                   G GG LAKKR+LED+SKW ARKLEA +     A +    A +PLHIAPR Q++        +YDPPAPLLPPL
Sbjct:   74 KRADWECSKCSTLNFARRDRCFGCGAAMGKGYRTTIPTNVLRVSGLRRSTTSEQVVLALKPFAPVKDAHLAVHPTTNASLRACHVEFQSVEHAQHTLDTASVEGDGG-------LTIEGEPASLSYAASGAAPXXXXXXXXXXXXXXXXXXXXXRIVAPVSASSVTALKAFQGRQNAARLAKLEGGEAATGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDAXXXXXXXAMA----VVTLGGAAGSEGASPEAVCAALQKKLNPPDWPPPFEEAGAAYLFDGPSGYFYESTTGVYYDPRSKLYCKGMVWYSHTPGQDPAFNPVSQQGGT---DARSSLANGASEGVSVGDATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKK---SSSRLAFGFKGAKLAKAAAGGGGVGASGVLGGADSDSSGDDSGGEVAAGVGRGTVGGGVGVGGALAKKRQLEDVSKWNARKLEAQQGEGGGASNGTKAAAQPLHIAPRRQQQPSAPQATISYDPPAPLLPPL 607
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BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: A0A7C9AUR1_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AUR1_OPUST)

HSP 1 Score: 63.9 bits (154), Expect = 1.100e-6
Identity = 42/118 (35.59%), Postives = 52/118 (44.07%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCG-----------------APIGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C                  AP+GR    + PT+VL V GL  N   E + +     AP+KD +L     T  S    +V F SVE A   LE    T
Sbjct:  360 SDWMCTICGCVNFARRVSCFQCNESRTDDAPPADLSSSNPAPLGRKGAEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGT 477
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BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: A0A7C9AWL4_OPUST (Uncharacterized protein n=3 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AWL4_OPUST)

HSP 1 Score: 63.9 bits (154), Expect = 1.350e-6
Identity = 42/118 (35.59%), Postives = 52/118 (44.07%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCG-----------------APIGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C                  AP+GR    + PT+VL V GL  N   E + +     AP+KD +L     T  S    +V F SVE A   LE    T
Sbjct:  360 SDWMCTICGCVNFARRVSCFQCNESRTDDAPPADLSSSNPAPLGRKGAEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGT 477
[Close]
BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: UPI001C4F197B (SUPPRESSOR OF ABI3-5-like isoform X3 n=3 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F197B)

HSP 1 Score: 63.9 bits (154), Expect = 1.390e-6
Identity = 41/118 (34.75%), Postives = 51/118 (43.22%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCGAP-----------------IGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C  P                 +GR    + PT+VL V GL  N   E + +     AP+KD +L     T  S    +V F SVE A   LE    T
Sbjct:  387 SDWMCTICNCVNFARRTSCFQCNEPRTDDAAAADVASSNPTQLGRKGSEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGT 504
[Close]
BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: UPI001CC45291 (SUPPRESSOR OF ABI3-5 isoform X3 n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI001CC45291)

HSP 1 Score: 63.2 bits (152), Expect = 2.310e-6
Identity = 41/118 (34.75%), Postives = 51/118 (43.22%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCGAP-----------------IGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C  P                 +GR    + PT+VL V GL  N   E + +     AP+KD +L     T  S    +V F SVE A   LE    T
Sbjct:  394 SDWMCTICGCVNFARRTSCFQCNEPRTEDAPAADIALSNPASLGRKGFEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGT 511
[Close]
BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: UPI00192A0F0A (LOW QUALITY PROTEIN: SUPPRESSOR OF ABI3-5 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI00192A0F0A)

HSP 1 Score: 63.2 bits (152), Expect = 2.380e-6
Identity = 40/118 (33.90%), Postives = 51/118 (43.22%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCG-----------------APIGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C                   P+GR    + PT+VL V GL  N   E + +     AP+KD +L     T  S    ++ F SVE A   LE    T
Sbjct:  369 SDWMCTMCGCVNFARRTSCFQCNEGRTEDAPLADVASSNPTPLGRKGSEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFLHFHSVEDATKALEATNGT 486
[Close]
BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: A0A251LG50_MANES (Uncharacterized protein n=7 Tax=Crotonoideae TaxID=235631 RepID=A0A251LG50_MANES)

HSP 1 Score: 63.2 bits (152), Expect = 2.390e-6
Identity = 41/118 (34.75%), Postives = 51/118 (43.22%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCGAP-----------------IGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C  P                 +GR    + PT+VL V GL  N   E + +     AP+KD +L     T  S    +V F SVE A   LE    T
Sbjct:  394 SDWMCTICGCVNFARRTSCFQCNEPRTEDAPAADIALSNPASLGRKGFEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGT 511
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BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: A0A6A6MR57_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MR57_HEVBR)

HSP 1 Score: 63.2 bits (152), Expect = 2.410e-6
Identity = 41/118 (34.75%), Postives = 51/118 (43.22%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCGAP-----------------IGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C  P                 +GR    + PT+VL V GL  N   E + +     AP+KD +L     T  S    +V F SVE A   LE    T
Sbjct:  462 SDWMCTICGCVNFARRTSCFQCNEPRTEDAPPADVALSNPTSLGRKGFEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGT 579
[Close]
BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: UPI001CC4A871 (SUPPRESSOR OF ABI3-5-like isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC4A871)

HSP 1 Score: 62.8 bits (151), Expect = 3.010e-6
Identity = 41/118 (34.75%), Postives = 51/118 (43.22%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCGAP-----------------IGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C  P                 +GR    + PT+VL V GL  N   E + +     AP+KD +L     T  S    +V F SVE A   LE    T
Sbjct:  397 SDWMCTICGCVNFARRTSCFQCNEPRTDDAPEAGVASSNPTELGRKGSEAGPTHVLVVRGLDENADEEILRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGT 514
[Close]
BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Match: M4CS65_BRARP (Uncharacterized protein n=10 Tax=Brassiceae TaxID=981071 RepID=M4CS65_BRARP)

HSP 1 Score: 62.8 bits (151), Expect = 3.060e-6
Identity = 41/117 (35.04%), Postives = 50/117 (42.74%), Query Frame = 1 
Query:   73 SDWECSKCRALNFARRDHCFGCGAP----------------IGRGFHSSIPTNVLRVSGLRGNTGTEEVVFALKPFAPVKDAQLAVHPITGSSLRACYVEFASVELAQHTLETARST 375
            SDW C+ C  +NFARR  CF C  P                 GR    S PT+VL V GL  +   E + +     AP+KD +L     T  S    +V F SVE A   LE    T
Sbjct:  366 SDWICTICGCINFARRTSCFQCNEPKTDDSPSVDVGLSNSTAGRRSSESGPTHVLVVRGLDEDADEEMIRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFFSVEDATKALEATNGT 482
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12233.1707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7L5_ECTSI7.150e-10253.54RanBP, RRM1, C2H2 zinc finger protein n=2 Tax=Ecto... [more]
A0A7C9AUR1_OPUST1.100e-635.59Uncharacterized protein n=1 Tax=Opuntia streptacan... [more]
A0A7C9AWL4_OPUST1.350e-635.59Uncharacterized protein n=3 Tax=Opuntia streptacan... [more]
UPI001C4F197B1.390e-634.75SUPPRESSOR OF ABI3-5-like isoform X3 n=3 Tax=Macad... [more]
UPI001CC452912.310e-634.75SUPPRESSOR OF ABI3-5 isoform X3 n=1 Tax=Manihot es... [more]
UPI00192A0F0A2.380e-633.90LOW QUALITY PROTEIN: SUPPRESSOR OF ABI3-5 n=1 Tax=... [more]
A0A251LG50_MANES2.390e-634.75Uncharacterized protein n=7 Tax=Crotonoideae TaxID... [more]
A0A6A6MR57_HEVBR2.410e-634.75Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]
UPI001CC4A8713.010e-634.75SUPPRESSOR OF ABI3-5-like isoform X1 n=3 Tax=Telop... [more]
M4CS65_BRARP3.060e-635.04Uncharacterized protein n=10 Tax=Brassiceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12233contigH-elongata_contig12233:2205..7444 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.4
Seed ortholog evalue9.7e-46
Seed eggNOG ortholog2880.D7G7L5
EggNOG free text desc.RNA splicing
EggNOG OGsKOG0154@1,KOG0154@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size2675
Cds size1464
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929719.9794009-UTR-H-elongata_contig12233:2204..22971622929719.9794009-UTR-H-elongata_contig12233:2204..2297Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12233 2205..2297 +
1691679131.7739694-UTR-H-elongata_contig12233:2204..22971691679131.7739694-UTR-H-elongata_contig12233:2204..2297Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12233 2205..2297 +
1622929719.998064-UTR-H-elongata_contig12233:3108..32431622929719.998064-UTR-H-elongata_contig12233:3108..3243Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12233 3109..3243 +
1691679131.7873487-UTR-H-elongata_contig12233:3108..32431691679131.7873487-UTR-H-elongata_contig12233:3108..3243Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12233 3109..3243 +
1622929720.0116305-UTR-H-elongata_contig12233:3669..39331622929720.0116305-UTR-H-elongata_contig12233:3669..3933Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12233 3670..3933 +
1691679131.7972453-UTR-H-elongata_contig12233:3669..39331691679131.7972453-UTR-H-elongata_contig12233:3669..3933Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12233 3670..3933 +
1622929720.131223-UTR-H-elongata_contig12233:6725..74441622929720.131223-UTR-H-elongata_contig12233:6725..7444Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12233 6726..7444 +
1691679131.8756232-UTR-H-elongata_contig12233:6725..74441691679131.8756232-UTR-H-elongata_contig12233:6725..7444Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12233 6726..7444 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929720.033017-CDS-H-elongata_contig12233:3933..42811622929720.033017-CDS-H-elongata_contig12233:3933..4281Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 3934..4281 +
1691679131.804686-CDS-H-elongata_contig12233:3933..42811691679131.804686-CDS-H-elongata_contig12233:3933..4281Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 3934..4281 +
1622929720.056407-CDS-H-elongata_contig12233:4499..45971622929720.056407-CDS-H-elongata_contig12233:4499..4597Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 4500..4597 +
1691679131.8174782-CDS-H-elongata_contig12233:4499..45971691679131.8174782-CDS-H-elongata_contig12233:4499..4597Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 4500..4597 +
1622929720.072899-CDS-H-elongata_contig12233:4921..54651622929720.072899-CDS-H-elongata_contig12233:4921..5465Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 4922..5465 +
1691679131.8371463-CDS-H-elongata_contig12233:4921..54651691679131.8371463-CDS-H-elongata_contig12233:4921..5465Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 4922..5465 +
1622929720.0903616-CDS-H-elongata_contig12233:5926..62921622929720.0903616-CDS-H-elongata_contig12233:5926..6292Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 5927..6292 +
1691679131.854294-CDS-H-elongata_contig12233:5926..62921691679131.854294-CDS-H-elongata_contig12233:5926..6292Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 5927..6292 +
1622929720.106135-CDS-H-elongata_contig12233:6617..67251622929720.106135-CDS-H-elongata_contig12233:6617..6725Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 6618..6725 +
1691679131.86442-CDS-H-elongata_contig12233:6617..67251691679131.86442-CDS-H-elongata_contig12233:6617..6725Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12233 6618..6725 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12233.1707.1prot_H-elongata_contig12233.1707.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12233 3934..6725 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12233.1707.1

>prot_H-elongata_contig12233.1707.1 ID=prot_H-elongata_contig12233.1707.1|Name=mRNA_H-elongata_contig12233.1707.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=488bp
MSVGAGGRGKSSARAPAVSASSETALKAFQGRQTAVRLAKLEGAEAGEAD
ASAAAAAAAVAARTRVDTGSGAGTGSLAIAFAGGAGEVGVRVGAVSLGGM
VGTAGNEAGSDGAPPEVVNAALEKKLNPPLWPQSFEEDGAAYLFDGPSGY
FYESSTGVYYDPKSKLYCKDMRWHQHVPGQDPAFVPVEQEGTAYQDEAQD
QNAVRTVDPIPVGGASTDAQAQVQATARLNGSGAKPAAAAKPVGNSVGGN
RSKGIGGKKQRIAFGFKGIKLAKPGAGSVVGAAVGSEDDGGGGTNGSEST
GGGGSGSGPGGLAKKRRLEDLSKWKARKLEAAEKAVDDKGKAPEPLHIAP
RLQRKEPTYDPPAPLLPPLPGEDEAPNPEEVELPKAESSSVGDWVGGVGI
GGLMTGPRGGRGALGLGTGTGGRGQGGGNTVARAPGDGGDGSGAAPVVVA
CLLCRRSFGSTEMLRKHEKKSKLHKDNLAAAAKTAST*
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mRNA from alignment at H-elongata_contig12233:2205..7444+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12233.1707.1 ID=mRNA_H-elongata_contig12233.1707.1|Name=mRNA_H-elongata_contig12233.1707.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5240bp|location=Sequence derived from alignment at H-elongata_contig12233:2205..7444+ (Himanthalia elongata Himel1 dioecious)
GATGCCTTGCTGAATGCTGATCGTGGTAGTGGGGCATCTGCTCCGCAGGC
TTCCCATGGAAGGTCGAGGCGGAGCGACTGGGAGTGCTCTAAGGTGAGGC
GCGAGGTCAGCCGAGGCCTGTCGCAAGATGGTCGGCCTAAGAAAACACGA
AAGAATACCGCGTAGATCGCGTAGCAAGGCGGCCTGCTCCGTGTGCGTTG
GTCCGTCCTTGCGTGCGGACTGCTCCCCACCCAAGTGTTTGAAAAAAAAA
TATGCTCCTCCTATCTGCTTGCCTGCGCGCGTGCGATACATTTTATTGTG
CATGTTTTTTTGGGGGGAGGGGTTGGCGCCGTGGCCAAACACACGAGGAG
GAAACGGCCCTAGGGAAAAGAAGAGGGATAAAACCCCTATATACCCTGAG
GGCTTTTTTTTCGGGCGATGAGGCTTGTCCCGTTTGGGCTTCTTGTTATT
TTTCCGTTTCAAAGTGTATTAAACAAAGTGTATTAAAACTAGAAACAGAA
AAATAAAAGAAAGATATAAATGAAGAGGGCGCTTGGTGAAAAGGATAGTA
AAAAAAAATGGCACAAGTGTCGCCTCGGAGGTCAAATCATATGAATTTTC
TGATGTGGCGGGTCTCTTTTTGCAACTGTCTGGAGGGAAAAACCCTTGCG
TGTAACGTGCAGGGTTTGTAATGTTCTGAAGCACGACGCCGCGACCTTCC
TTGTGTTCAATGGCAGCAACACGTCCCTTCCTCCCTCACCCCCCTCTCTT
CTCTCCATGTTCCTCGCTTTTGGTATCCCCCCCCCCCTCCCCCTCACCCC
CCTCTCTTTTCTCCATGTTCCCCGCTTCTGGTACGTTTATCTCGTTGATT
TTTAACCGTTTCTCTCGCCCGCTTTCCGTCTCGCTGCCTTTTCGCTTCGC
CCAGTGCCGGGCACTAAACTTCGCTCGGCGGGATCACTGCTTCGGCTGCG
GAGCCCCCATTGGGCGAGGCTTTCACAGCTCGATCCCTACCAACGTGCTC
CGAGTTTCTGGCCTGAGAGGAAATACGGGCACAGAAGAGGTGCAAGGCAG
GCGAACGTTTCCACTCTCAAACCGGCCTCTCTCTCTCCCGCGTCGTTGAG
TAGAATGCGCCAAAGGAATTATGTTCTCTTATCGGGCAGTGGTCTCTCCC
TCATTCTTGGCGTGTAGGCAATAAGGGTTAAGAAGGTGGCAGATGGATGG
GACCCTATCCCGCCTCAGCAGCCGCGGTTCGACTGGATAAGGAAATATGT
TGGTTTTACCTACCGCGGCTTGTGGGCAAGATCTACGCCGCGGGATTCGA
CAGCGCAGTATCGTAATGTCAAGTTATCGTGTTGGCTCACGATACCGGAG
CAGCAAATATTTACGTCGTGGAATCACTTTTATCCCCCGCTTCCCCCCCC
CTCCCCCACACTTATCGAACCCCGAATCTCACGATTAACGTACCCCGGCC
TTAACCCACTCGCAGGTGGTTTTCGCCCTGAAACCCTTCGCGCCGGTCAA
GGATGCCCAGCTAGCAGTCCACCCGATCACGGGTTCCTCCCTGCGCGCAT
GCTACGTCGAGTTTGCCTCCGTCGAGCTTGCCCAGCATACGCTCGAGACG
GCGCGCTCCACTGGGGGCTCCTCCGGAGGCGGTGGTGGCGGTGGCCTCAC
CGTGGGAGGCGTCAAGGTTTCTCTCTCCTACGCTGCAGCCGGAGCGCCCC
CGGCGTCGGCTGCCGCGGCGATAGCGGTGATGTCAGTGGGAGCGGGGGGA
AGGGGGAAATCCTCCGCGCGCGCGCCGGCCGTGTCGGCCTCCTCTGAAAC
CGCTCTCAAGGCGTTCCAGGGACGGCAGACCGCGGTGCGATTGGCGAAGC
TCGAAGGCGCCGAGGCGGGCGAAGCGGACGCTTCAGCTGCTGCCGCAGCG
GCGGCGGTGGCTGCCCGGACGCGCGTGGACACCGGTTCGGGGGCGGGGAC
AGGCTCGCTCGCTATCGCGTTTGCTGGGGGCGCCGGCGAGGTCGGGGTGA
GAGTGGGAGCAGTGAGTTTGGGAGGGATGGTCGGGACGGCGGGAAATGAA
GCAGGTTCTGACGGAGCTCCGCCGGAGGTGAGGCTTCGAAGGAGGTAGTG
CTAGGGACGAGGGGGGAGTTTAGGGAAGGGGACGCACGCTAGAAGATGCC
ATCCATCCTCTGTCTCTTGTCGCTTATCGTTGACAATATCGGTCGTTGGA
GGAGGCGTTTATCATGGTCCACTTTGGCCGATGATTTACACGCAGTTCCC
ATCGAATCTAGCAATACCTCCCTTATATATTGGGCTATGCATCAGGTCGT
GAACGCCGCACTCGAGAAGAAGTTAAATCCTCCTCTATGGCCGCAGTCTT
TCGAGGAGGACGGAGCCGCTTATCTGTTCGATGGACCCAGTGGGTGCGTG
TCAGGCAGCGGCGGGACGGGTTTCGAAAGTTTCGTTTTGTAAGCACCCGC
TTTTTTCTTCTTCTTGCGCTTAGCTCTCAGCCTCACCTAGACGATATCTT
GTTCGGTGGAGTTTAAAACCCCCGAGGTTACTTAAAAATATGAAAAACAT
TACCCCTCTTTCCCCCCGTCGTCCCTTCTCACCATTGTTGCACTGGCGGG
GGGGGGGGGCCCCCCCTCACTTTCCCTTCCTCCTCCTCCTCCTCCTTGCC
CATTTTAAAACATTTTCACGCAACTGTTTTATTTTATTTTATTGGCATTC
CCTTTCCGTGTCGGCAGTTATTTCTATGAGTCGTCCACCGGGGTGTACTA
CGATCCTAAGAGCAAGCTCTACTGCAAAGATATGCGATGGCATCAGCATG
TACCCGGGCAAGATCCCGCCTTCGTTCCAGTCGAGCAAGAGGGGACGGCC
TATCAGGACGAAGCCCAGGATCAAAACGCCGTGAGAACGGTGGATCCCAT
TCCCGTCGGGGGCGCGAGCACCGACGCTCAAGCACAAGTTCAAGCCACCG
CGAGGTTGAACGGGTCGGGTGCGAAGCCCGCGGCGGCTGCGAAGCCTGTC
GGTAATTCTGTCGGAGGAAATCGTTCGAAAGGCATCGGCGGGAAAAAGCA
GCGCATCGCCTTCGGATTCAAGGGGATCAAGCTTGCGAAGCCCGGGGCCG
GAAGCGTTGTTGGGGCAGCAGTCGGCTCAGAGGACGACGGCGGGGGTGGG
ACAAATGGTTCTGAGTCGACGGGCGGCGGTGGAAGCGGCAGTGGGCCGGG
AGGACTGGCGAAGAAGCGGCGACTCGAGGACTTATCAAAGTGGAAAGCCC
GGAAGCTCGAGGTCCGCTGAGAGGAGAAAATAACGTCGCAAACTTCCACT
GGCACTGTCTCTTTCTCTCTTTGCTTTTTTTTCCGCTCCCCGCAGGTTGA
TCAACAGGTCGACCCCCCCCCCCCCACGTTTTAAAAACGTGCGAAGCTTG
GTCTATTGCACAGGTTTCAAATACATTTCACAGAACCTATGATTTAGGTT
TATTCCGTCGTCTCTCCGTCGTTAGGTGTTTCGCACCCGTCACATGGTGC
GTGTCTCTAGTGTTAGCACAGCTACACGCGAAGCTTGCTTCGAGACCATC
TTGATCCCCGACATCTTCGGCTTCAGCAGAGTTGCCCCTACCCGTAACAC
ACTCAGGAAAAAACAGTTCAAGACAGAGACCGATGCGTATACTACAGCTT
GCTTCGTCATTTTATTTTTATTTTTATTTTGCTGAATCTTGTCGTGTTTT
ATCGCATTGCGCCAAAATTCAGGCGGCGGAAAAAGCAGTCGACGATAAGG
GGAAAGCCCCCGAGCCCCTCCACATCGCCCCGCGGCTTCAGCGGAAGGAG
CCAACCTACGACCCGCCAGCCCCCCTCCTGCCCCCGCTTCCTGGAGAGGA
CGAAGCGCCTAATCCTGAAGAGGTGGAACTCCCGAAAGCGGAATCGAGTA
GCGTTGGAGACTGGGTGGGCGGTGTGGGCATCGGCGGATTGATGACTGGG
CCCAGGGGGGGTCGCGGGGCGCTGGGCTTGGGAACCGGCACCGGAGGAAG
GGGACAAGGTGGAGGAAACACCGTTGCGCGTGCGCCCGGGGATGGTGGAG
ACGGAAGTGGAGCGGCGCCGGTGGTCGTGGCGTGTCTGGTGAGACGGAAG
CGATACGGACGTCCCGCTCTCTGGACTGACGGTTGTGCTTTTTACTCCGG
CGATTGATAGCGTCGTTTAGTTTTCTCGTCGTTTGTCGATTAGCCGAAGC
CGAGCGAGGGCATTCGCGGTATGTGGGTGTGTATGTGTGTGTGTCTGAGT
GTTATTCGAAGGGTATTTCTTCCCCAAAACTCTCGGCGTCGTCTTGCGAC
AATTTTTGCATATATATATATATATATATATATATCCATGTCAACTGTTT
ATTTATTTATTTCTTTATTGTTTGTTGTTGTTTTTCTTCTCTTCCCATCC
AATATCTGCACAGCTCTGCCGGAGGTCGTTCGGATCTACCGAGATGCTCC
GCAAGCACGAAAAAAAGTCTAAGTTGCACAAGGATAACCTCGCCGCCGCC
GCGAAGACCGCTTCGACGTGACGGGGCAACCGAATTCCTCAAACCAATCG
CGGGGGAGGGTTTAATGGACTGGATCGTGGCAAGCCTCTTTGCCAATAGC
AGGACACAACCGAACGCCATGCAGCGCTTGATTCCGCAGGTGCACCTTTG
TCACTGACAACAAGAGAGTTGCCAACGCCTTGTCGGTTCGTGAGGCGTGG
GAATGAGGAGGATATATGGAGGATTGGGGGAGAGACTGGTGTGGCATTCT
TGAGAAGCTAGCATATATTTTGGTGGTAGTTGAGTCGCTTCATTCAGGAC
ACGGTGGGACTCTTGTGGAGTACTGTAGCTGCGATGAGGCGATACAAGCG
AGAGTGTCGTTGACAGAAATTATGTTGGCATATATAATATATATATATAT
AGTACCTACGTACACTCTCTCTCTCGACTGAGGGCGCAACCCGTGCCAAT
CGAGTCGTCTAGTAGGAAGTCTGTGGCGTACCGGCTGTAGCGGTCGAAGG
AGTGTGTTGAGGGCATCAAGATAGGAATAAAGTAACAAAGGTAGGGATGG
GAGAATTCTACGGATAAGTTTGGCTGCTAAGGGTTCATGGAAGCAATTCT
TGCTATTAATAGTGAGTGCTCTGTTTGTAGCACGTTTAGGATCTGCCTCC
GAGTGCGTGCACGGTGCCTCTAGGTATGACGCCTTTCCATGGTGTCTATC
TGAGTGCAGCCACCTGGAATAATCGAACCTCGTTTAACGG
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Coding sequence (CDS) from alignment at H-elongata_contig12233:2205..7444+

>mRNA_H-elongata_contig12233.1707.1 ID=mRNA_H-elongata_contig12233.1707.1|Name=mRNA_H-elongata_contig12233.1707.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2928bp|location=Sequence derived from alignment at H-elongata_contig12233:2205..7444+ (Himanthalia elongata Himel1 dioecious)
ATGTCAGTGGGAGCGGGGGGAAGGGGGAAATCCTCCGCGCGCGCGCCGGC
CGTGTCGGCCTCCTCTGAAACCGCTCTCAAGGCGTTCCAGGGACGGCAGA
CCGCGGTGCGATTGGCGAAGCTCGAAGGCGCCGAGGCGGGCGAAGCGGAC
GCTTCAGCTGCTGCCGCAGCGGCGGCGGTGGCTGCCCGGACGCGCGTGGA
CACCGGTTCGGGGGCGGGGACAGGCTCGCTCGCTATCGCGTTTGCTGGGG
GCGCCGGCGAGGTCGGGGTGAGAGTGGGAGCAGTGAGTTTGGGAGGGATG
GTCGGGACGGCGGGAAATGAAGCAGGTTCTGACGGAGCTCCGCCGGAGAT
GTCAGTGGGAGCGGGGGGAAGGGGGAAATCCTCCGCGCGCGCGCCGGCCG
TGTCGGCCTCCTCTGAAACCGCTCTCAAGGCGTTCCAGGGACGGCAGACC
GCGGTGCGATTGGCGAAGCTCGAAGGCGCCGAGGCGGGCGAAGCGGACGC
TTCAGCTGCTGCCGCAGCGGCGGCGGTGGCTGCCCGGACGCGCGTGGACA
CCGGTTCGGGGGCGGGGACAGGCTCGCTCGCTATCGCGTTTGCTGGGGGC
GCCGGCGAGGTCGGGGTGAGAGTGGGAGCAGTGAGTTTGGGAGGGATGGT
CGGGACGGCGGGAAATGAAGCAGGTTCTGACGGAGCTCCGCCGGAGGTCG
TGAACGCCGCACTCGAGAAGAAGTTAAATCCTCCTCTATGGCCGCAGTCT
TTCGAGGAGGACGGAGCCGCTTATCTGTTCGATGGACCCAGTGGGTCGTG
AACGCCGCACTCGAGAAGAAGTTAAATCCTCCTCTATGGCCGCAGTCTTT
CGAGGAGGACGGAGCCGCTTATCTGTTCGATGGACCCAGTGGTTATTTCT
ATGAGTCGTCCACCGGGGTGTACTACGATCCTAAGAGCAAGCTCTACTGC
AAAGATATGCGATGGCATCAGCATGTACCCGGGCAAGATCCCGCCTTCGT
TCCAGTCGAGCAAGAGGGGACGGCCTATCAGGACGAAGCCCAGGATCAAA
ACGCCGTGAGAACGGTGGATCCCATTCCCGTCGGGGGCGCGAGCACCGAC
GCTCAAGCACAAGTTCAAGCCACCGCGAGGTTGAACGGGTCGGGTGCGAA
GCCCGCGGCGGCTGCGAAGCCTGTCGGTAATTCTGTCGGAGGAAATCGTT
CGAAAGGCATCGGCGGGAAAAAGCAGCGCATCGCCTTCGGATTCAAGGGG
ATCAAGCTTGCGAAGCCCGGGGCCGGAAGCGTTGTTGGGGCAGCAGTCGG
CTCAGAGGACGACGGCGGGGGTGGGACAAATGGTTCTGAGTCGACGGGCG
GCGGTGGAAGCGGCAGTGGGCCGGGAGGACTGGCGAAGAAGCGGCGACTC
GAGGACTTATCAAAGTGGAAAGCCCGGAAGCTCGAGTTATTTCTATGAGT
CGTCCACCGGGGTGTACTACGATCCTAAGAGCAAGCTCTACTGCAAAGAT
ATGCGATGGCATCAGCATGTACCCGGGCAAGATCCCGCCTTCGTTCCAGT
CGAGCAAGAGGGGACGGCCTATCAGGACGAAGCCCAGGATCAAAACGCCG
TGAGAACGGTGGATCCCATTCCCGTCGGGGGCGCGAGCACCGACGCTCAA
GCACAAGTTCAAGCCACCGCGAGGTTGAACGGGTCGGGTGCGAAGCCCGC
GGCGGCTGCGAAGCCTGTCGGTAATTCTGTCGGAGGAAATCGTTCGAAAG
GCATCGGCGGGAAAAAGCAGCGCATCGCCTTCGGATTCAAGGGGATCAAG
CTTGCGAAGCCCGGGGCCGGAAGCGTTGTTGGGGCAGCAGTCGGCTCAGA
GGACGACGGCGGGGGTGGGACAAATGGTTCTGAGTCGACGGGCGGCGGTG
GAAGCGGCAGTGGGCCGGGAGGACTGGCGAAGAAGCGGCGACTCGAGGAC
TTATCAAAGTGGAAAGCCCGGAAGCTCGAGGCGGCGGAAAAAGCAGTCGA
CGATAAGGGGAAAGCCCCCGAGCCCCTCCACATCGCCCCGCGGCTTCAGC
GGAAGGAGCCAACCTACGACCCGCCAGCCCCCCTCCTGCCCCCGCTTCCT
GGAGAGGACGAAGCGCCTAATCCTGAAGAGGTGGAACTCCCGAAAGCGGA
ATCGAGTAGCGTTGGAGACTGGGTGGGCGGTGTGGGCATCGGCGGATTGA
TGACTGGGCCCAGGGGGGGTCGCGGGGCGCTGGGCTTGGGAACCGGCACC
GGAGGAAGGGGACAAGGTGGAGGAAACACCGTTGCGCGTGCGCCCGGGGA
TGGTGGAGACGGAAGTGGAGCGGCGCCGGTGGTCGTGGCGTGTCTGGCGG
CGGAAAAAGCAGTCGACGATAAGGGGAAAGCCCCCGAGCCCCTCCACATC
GCCCCGCGGCTTCAGCGGAAGGAGCCAACCTACGACCCGCCAGCCCCCCT
CCTGCCCCCGCTTCCTGGAGAGGACGAAGCGCCTAATCCTGAAGAGGTGG
AACTCCCGAAAGCGGAATCGAGTAGCGTTGGAGACTGGGTGGGCGGTGTG
GGCATCGGCGGATTGATGACTGGGCCCAGGGGGGGTCGCGGGGCGCTGGG
CTTGGGAACCGGCACCGGAGGAAGGGGACAAGGTGGAGGAAACACCGTTG
CGCGTGCGCCCGGGGATGGTGGAGACGGAAGTGGAGCGGCGCCGGTGGTC
GTGGCGTGTCTGCTCTGCCGGAGGTCGTTCGGATCTACCGAGATGCTCCG
CAAGCACGAAAAAAAGTCTAAGTTGCACAAGGATAACCTCGCCGCCGCCG
CGAAGACCGCTTCGACGTGACTCTGCCGGAGGTCGTTCGGATCTACCGAG
ATGCTCCGCAAGCACGAAAAAAAGTCTAAGTTGCACAAGGATAACCTCGC
CGCCGCCGCGAAGACCGCTTCGACGTGA
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