mRNA_H-elongata_contig122263.1702.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A6H5KTV8_9PHAE (ATPase ASNA1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV8_9PHAE) HSP 1 Score: 402 bits (1033), Expect = 5.290e-139 Identity = 200/221 (90.50%), Postives = 210/221 (95.02%), Query Frame = 1
Query: 1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
+ MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALS+LMDLKNKFSG+FSQFG+MFG GGA+EDD+FGKLLQLKE+INKVN QFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIG+LQKWY+ EE TL EAKSIICKTLARKRMQ DKYIGQI+DLYEDFHVVLMPLLDHE R
Sbjct: 112 KGMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSKLMDLKNKFSGLFSQFGNMFGAGGATEDDMFGKLLQLKEIINKVNDQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGDLQKWYSTEEGTLSTEAKSIICKTLARKRMQ---DKYIGQIYDLYEDFHVVLMPLLDHEVR 329
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A835ZI69_9STRA (ATPase ASNA1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI69_9STRA) HSP 1 Score: 366 bits (940), Expect = 7.250e-125 Identity = 180/221 (81.45%), Postives = 199/221 (90.05%), Query Frame = 1
Query: 1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
++MF+DMS SIPGVDEAMSFAELMKMVQ MNFSCI+FDTAPTGHTLRLLSFPTIMDKAL+++M LK+KF+G QFG+MFG GGAS DDL GKL Q++++INKVN QFKDP++TTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFP KDIG+LQKWY EE TL EAKSIICKT++RKRMQ DKYIGQI DLYEDFHVVLMPLLDHE R
Sbjct: 118 KNMFADMSTSIPGVDEAMSFAELMKMVQVMNFSCIIFDTAPTGHTLRLLSFPTIMDKALTKIMALKDKFAGALGQFGAMFGAGGASPDDLMGKLEQMRDIINKVNDQFKDPERTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPNKDIGDLQKWYESEEATLSGEAKSIICKTMSRKRMQ---DKYIGQILDLYEDFHVVLMPLLDHEVR 335
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7S2SEK5_9STRA (ATPase ASNA1 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEK5_9STRA) HSP 1 Score: 298 bits (763), Expect = 4.760e-98 Identity = 148/219 (67.58%), Postives = 174/219 (79.45%), Query Frame = 1
Query: 7 MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
+ D++ +IPG+DEAMSFAELMK VQ M++ IVFDTAPTGHTLRLLSFPT++ KA ++M LKN F G+ SQF SM G+ SE+ L G+L Q +EVI +VN FKDP KTTFVCVCIPEFLSLYETERLVQELTKF+IDTHN+VVNQVLFP KD EL +WY EE L EA+ ++ K LARKRMQ DKY+ QI+DLYEDFHVVLMPLL+HE R
Sbjct: 122 LMQDLTQAIPGIDEAMSFAELMKQVQTMDYDVIVFDTAPTGHTLRLLSFPTMLGKAFDKIMALKNSFGGLLSQFSSMMGSQMPSEEMLLGRLEQTREVIERVNLTFKDPTKTTFVCVCIPEFLSLYETERLVQELTKFDIDTHNVVVNQVLFPDKDAQELSEWYTTEEPKLSPEARELLGKLLARKRMQ---DKYVNQIWDLYEDFHVVLMPLLNHEVR 337
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7S2AZ07_9STRA (ATPase ASNA1 homolog n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZ07_9STRA) HSP 1 Score: 291 bits (746), Expect = 1.630e-95 Identity = 145/221 (65.61%), Postives = 175/221 (79.19%), Query Frame = 1
Query: 1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
+S+ D++ +IPG+DEAMSFAELMK VQ M++ IVFDTAPTGHTLRLLSFP+++ KA ++M LKN+FSG+F+Q M G SED L GKL Q +EVI +VN FKDP KTTFVCVCIPEFLSLYETERLVQELTK + DTHNIVVNQVLFP KD +L +WY +E+ L E ++ ++ K LARKRMQ DKY+ QI+DLYEDFHVVLMPLL+HE R
Sbjct: 116 QSLMQDLTKAIPGIDEAMSFAELMKQVQAMDYDVIVFDTAPTGHTLRLLSFPSMLGKAFDKIMALKNRFSGLFTQMQGMMGPDMPSEDMLLGKLEQTREVIERVNLTFKDPTKTTFVCVCIPEFLSLYETERLVQELTKLDFDTHNIVVNQVLFPDKDATQLTEWYEEEKPKLSETSQDLLSKLLARKRMQ---DKYVNQIWDLYEDFHVVLMPLLNHEVR 333
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: W7U3J2_9STRA (ATPase ASNA1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3J2_9STRA) HSP 1 Score: 292 bits (747), Expect = 1.780e-95 Identity = 146/221 (66.06%), Postives = 172/221 (77.83%), Query Frame = 1
Query: 1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
+SM ++++SIPG+DE +SFAELMK V+ M++S +VFDTAPTGHTLRLLSFP+ ++ A ++M KNKFSG+ SQFG M G +ED L GKL Q ++ I KVN QF+DP TTFVCVCI EFLS+YETERLVQEL KFEIDTHNIVVNQVLFP KD E+ W+ K + TL EA II K LARKRMQ DKYI Q+FDLYEDFHVVLMPLLDHE R
Sbjct: 134 QSMLQELTSSIPGIDEIISFAELMKQVEQMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKIMAFKNKFSGLMSQFGGMMGQPPGAEDALLGKLDQTRDTIEKVNKQFRDPQATTFVCVCIAEFLSIYETERLVQELAKFEIDTHNIVVNQVLFPDKDATEMSAWHEKTKATLPGEANEIISKFLARKRMQ---DKYINQVFDLYEDFHVVLMPLLDHEVR 351
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7S1DYB8_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DYB8_9STRA) HSP 1 Score: 280 bits (717), Expect = 3.850e-92 Identity = 145/226 (64.16%), Postives = 180/226 (79.65%), Query Frame = 1
Query: 1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGAS----EDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
+S+ S++++SIPG+DEAMSF+ELMK VQN++F +VFDTAPTGHTLRLLSFPTI++KAL ++MDLK++F G+ Q +MFG GGA+ +D L G+L + + VINKVN F+DP TTFVCVCIPEFLS+YETERLVQEL+KF ID+HNIVVNQVLFP KD EL W+ + L +EA+ I K +ARKRMQ DKYIGQ FDLY +DFHVVLMPLLD+E R
Sbjct: 42 QSLMSELTSSIPGIDEAMSFSELMKQVQNLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMDLKDRFGGLIGQASAMFG-GGANPTQVQDQLVGRLEETRAVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDSHNIVVNQVLFPEKDAEELGDWFEDNKDALPKEAQEICGKMMARKRMQ---DKYIGQCFDLYGDDFHVVLMPLLDYEVR 263
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A1E7FED7_9STRA (ATPase ASNA1 homolog n=5 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FED7_9STRA) HSP 1 Score: 283 bits (724), Expect = 4.220e-92 Identity = 146/224 (65.18%), Postives = 178/224 (79.46%), Query Frame = 1
Query: 4 SMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTG---GASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
SM S+++NSIPG+DEAMSF+ELMK VQ+++F +VFDTAPTGHTLRLLSFPTI++KAL ++M+LK++F G+ Q +M G G GA++D + G+L + + VINKVN F+DP TTFVCVCIPEFLS+YETERLVQEL+KF IDTHNIVVNQVLFP KD EL +WY + TL EA+ I K L+RKRMQ DKYIGQ FDLY EDFHV LMPLLD+E R
Sbjct: 122 SMMSELTNSIPGIDEAMSFSELMKQVQSLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLIGQATAMMGGGNNPGATQDAIVGRLEETRVVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDTHNIVVNQVLFPEKDAEELSEWYEGNKDTLPTEAREICGKMLSRKRMQ---DKYIGQCFDLYGEDFHVSLMPLLDYEVR 342
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7S0CCI9_9STRA (ATPase ASNA1 homolog n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCI9_9STRA) HSP 1 Score: 283 bits (724), Expect = 7.830e-92 Identity = 143/221 (64.71%), Postives = 177/221 (80.09%), Query Frame = 1
Query: 7 MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGAS-EDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
+ +++++SIPG+DEAMSF+ELMK VQ++++ +VFDTAPTGHTLRLLSFPTIM+KAL ++M+LK+KF G+ Q SMFG GA +D L GKL + + +INKVN F+DPD TTFVCVCIPEFLS+YETERLVQEL+KF ID+HNIVVNQVLFP KD E+ +W + L +EA+ I K +ARKRMQ DKYIGQ FDLY +DFHVVLMPLLDHE R
Sbjct: 145 LMAELTSSIPGIDEAMSFSELMKQVQSLDYDIVVFDTAPTGHTLRLLSFPTIMEKALGKVMELKDKFGGILGQAASMFGGNGAQMQDMLTGKLEETRAIINKVNDAFQDPDTTTFVCVCIPEFLSIYETERLVQELSKFGIDSHNIVVNQVLFPEKDAEEMGEWLKENNDKLPKEAQDICGKMMARKRMQ---DKYIGQCFDLYGDDFHVVLMPLLDHEVR 362
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: B7G933_PHATC (ATPase ASNA1 homolog n=5 Tax=Naviculales TaxID=38748 RepID=B7G933_PHATC) HSP 1 Score: 279 bits (714), Expect = 9.170e-91 Identity = 142/223 (63.68%), Postives = 174/223 (78.03%), Query Frame = 1
Query: 7 MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGG---ASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
MF+D+ NSIPG+DEAMSF+ELMK VQ ++F +VFDTAPTGHTLRLLSFPTI++KA +++ +LK++F G+ Q ++ G A+++ L GKL + + VINKVN F+DP KTTFVCVCIPEFLS+YETERLVQEL+K+ ID+HNIVVNQVLFP KD EL WY TL +EA+ I K LARKRMQ DKYIGQ FDLY +DFHVVLMPLLD+E R
Sbjct: 110 MFNDLQNSIPGIDEAMSFSELMKQVQQLDFDVVVFDTAPTGHTLRLLSFPTILEKAFAKVWELKDRFGGLIGQATALMSGGNNPAAAQEQLLGKLEETRAVINKVNQAFQDPTKTTFVCVCIPEFLSIYETERLVQELSKYGIDSHNIVVNQVLFPEKDAEELSAWYEANGATLPKEAREICSKLLARKRMQ---DKYIGQCFDLYGDDFHVVLMPLLDYEVR 329
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7R9ZQE1_9STRA (ATPase ASNA1 homolog n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQE1_9STRA) HSP 1 Score: 275 bits (704), Expect = 4.080e-89 Identity = 140/223 (62.78%), Postives = 174/223 (78.03%), Query Frame = 1
Query: 7 MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGA---SEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
M S++++SIPG+DEAMSF+ELMK VQ ++F +VFDTAPTGHTLRLLSFPTI++KAL ++M+LK++F G+ Q +M G+G ++D + G+L + VINKVN F+DP TTFVCVCIPEFLS+YETERLVQEL+KF ID HNIVVNQV+FP KD EL +WY K + +L EA+ I K +ARKRMQ DKYIGQ FDLY EDFHV LMPLLD+E R
Sbjct: 120 MMSELTSSIPGIDEAMSFSELMKQVQGLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLIGQATAMLGSGSNPANAQDAILGRLEDTRAVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDAHNIVVNQVIFPEKDAEELAEWYDKTKASLPSEAQEICSKMMARKRMQ---DKYIGQCFDLYGEDFHVTLMPLLDYEVR 339 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig122263.1702.1 >prot_H-elongata_contig122263.1702.1 ID=prot_H-elongata_contig122263.1702.1|Name=mRNA_H-elongata_contig122263.1702.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPback to top mRNA from alignment at H-elongata_contig122263:495..1857- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig122263.1702.1 ID=mRNA_H-elongata_contig122263.1702.1|Name=mRNA_H-elongata_contig122263.1702.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1363bp|location=Sequence derived from alignment at H-elongata_contig122263:495..1857- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig122263:495..1857- >mRNA_H-elongata_contig122263.1702.1 ID=mRNA_H-elongata_contig122263.1702.1|Name=mRNA_H-elongata_contig122263.1702.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1314bp|location=Sequence derived from alignment at H-elongata_contig122263:495..1857- (Himanthalia elongata Himel1 dioecious)back to top |