mRNA_H-elongata_contig122095.1689.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: A0A1W6IYH0_SACJA (Carbonic anhydrase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A1W6IYH0_SACJA) HSP 1 Score: 236 bits (602), Expect = 1.270e-75 Identity = 115/144 (79.86%), Postives = 121/144 (84.03%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVNV---TDIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
GL GELFVVRNV NLCVN HS L ALTYAVNV TDIIVCGHYGCGGVR AMEN +H LLEHWLLNIR+V RLHLDELK I D+DERH+R VELNVQESCINLFANP+VQKKQA S PKIHGW+YDV TG LKKLD DFK
Sbjct: 133 GLTTGELFVVRNVANLCVNTDHSLLAALTYAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNIRNVQRLHLDELKTIPDVDERHKRLVELNVQESCINLFANPIVQKKQATSSQPKIHGWVYDVATGLLKKLDIDFK 276
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: D8LR72_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR72_ECTSI) HSP 1 Score: 223 bits (569), Expect = 2.950e-70 Identity = 110/144 (76.39%), Postives = 119/144 (82.64%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVNV---TDIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
GL+ GELFVVRNV NLCVN HS L AL YAVNV TDIIVCGHYGCGGVR AMEN +H LLEHWLLNIR+V RLH +EL+ I D+DE+ RR VELNVQESCINLFANP+VQKKQA SMPKIHGW YDVG G LK+LD DFK
Sbjct: 138 GLNTGELFVVRNVANLCVNTDHSLLAALAYAVNVLEVTDIIVCGHYGCGGVRAAMENIDHGLLEHWLLNIRNVVRLHNEELQGISDMDEKSRRLVELNVQESCINLFANPIVQKKQATHSMPKIHGWAYDVGNGLLKELDIDFK 281
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: A0A835ZBM8_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM8_9STRA) HSP 1 Score: 206 bits (523), Expect = 4.580e-64 Identity = 99/144 (68.75%), Postives = 116/144 (80.56%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVNV---TDIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
GL GELFV RNV NLCVN +S L+ LTYAV V TDIIVCGHYGCGGVR AMENK+H LLEHWL++IR+V RLH EL I + +ERH+R VELNVQE+C+NLFANPVVQKKQA D+ P+IHGW+YD+G+G LK L DF+
Sbjct: 70 GLTTGELFVHRNVANLCVNTDYSLLSVLTYAVEVLEVTDIIVCGHYGCGGVRAAMENKDHGLLEHWLMHIRNVQRLHQAELAEIPNEEERHQRLVELNVQEACMNLFANPVVQKKQATDAQPRIHGWVYDIGSGLLKDLKIDFR 213
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: H6WB75_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB75_VAULI) HSP 1 Score: 191 bits (485), Expect = 5.380e-58 Identity = 89/144 (61.81%), Postives = 110/144 (76.39%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVNV---TDIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
GL GELFV+RNV NLC+N+ S L+ L +++ V TD+IVCGHYGCGGV AM+NK+H LLEHWL +IR+V RLH EL I D +R +R VELNVQESC+NLF+NP+VQKKQA S P+IHGW+YD+ TG +K L DFK
Sbjct: 104 GLQAGELFVIRNVANLCINSDFSLLSVLLFSIEVLEVTDVIVCGHYGCGGVNAAMKNKDHGLLEHWLHHIRNVQRLHKSELVQIPDESQRFKRLVELNVQESCLNLFSNPIVQKKQATASQPRIHGWVYDIATGYVKDLKIDFK 247
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: A0A6S9IM72_HETAK (Carbonic anhydrase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IM72_HETAK) HSP 1 Score: 176 bits (447), Expect = 5.630e-53 Identity = 86/144 (59.72%), Postives = 105/144 (72.92%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVNVT---DIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
GL GELFV RNV NL VN + L L Y+V V DIIVCGHY CGG++ A N +H L+EHWL NIRD+NRLH +EL+AIE + RHRR VELNVQE CINL+ANP+VQK Q S+P+IHG++YD+ G +K+L DFK
Sbjct: 89 GLKCGELFVHRNVANLVVNGDMNLLAVLQYSVEVLKVEDIIVCGHYECGGIKAACANHDHGLVEHWLRNIRDINRLHAEELEAIECEEARHRRLVELNVQEQCINLYANPIVQKAQLATSLPRIHGFVYDIAEGLVKELPIDFK 232
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: A0A7S1N9X7_9EUGL (Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9X7_9EUGL) HSP 1 Score: 176 bits (447), Expect = 1.300e-51 Identity = 87/144 (60.42%), Postives = 107/144 (74.31%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAV---NVTDIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
G+ GE+FV RNV NL VNN + L+ + YAV +V DIIVCGHY CGGVR A NK+H L+EHW+ NIRDV RLH +EL + + RHRR VELNVQE CINLFANP++Q++QA +P+IHG +YDVG G L+KLD DFK
Sbjct: 184 GMKAGEMFVHRNVANLVVNNDLNLLSVIAYAVEVLHVKDIIVCGHYECGGVRAAESNKDHGLVEHWIRNIRDVVRLHRNELAVLTG-EMRHRRLVELNVQEQCINLFANPIIQRRQAAHGLPRIHGMVYDVGEGLLRKLDLDFK 326
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: A0A7S2XTK6_9STRA (Carbonic anhydrase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTK6_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.940e-50 Identity = 82/145 (56.55%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVNVT---DIIVCGHYGCGGVRTAME-NKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
GL G++FV RNV NL VN + L+ L Y+V V D+IVCGHYGCGGV+ A +H LLEHWL NI+DV R+H DEL IED ++RH R VEL+VQE CINLFANP+VQ+ Q P+IHG++YD+G G L++L+ DFK
Sbjct: 92 GLSAGDVFVHRNVANLVVNGDMNLLSVLQYSVEVLKVRDVIVCGHYGCGGVKAASTIGTDHGLLEHWLRNIKDVIRVHQDELNTIEDEEKRHERLVELSVQEQCINLFANPIVQRSQVTHGYPRIHGFVYDIGNGYLRELEIDFK 236
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: A0A835YJA7_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA7_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.960e-49 Identity = 82/144 (56.94%), Postives = 102/144 (70.83%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVN---VTDIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
GL+MG+LFV RNV N VN +F+T LTYAV V +II+CGHY CGGV+ AM N +H ++E W++ IRDV R H EL+AI+D D HRR VELNVQE + L+ANPVVQ+ QA P IH ++DVG G LK+LD DFK
Sbjct: 49 GLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFK 192
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: A0A662WWX1_9STRA (Carbonic anhydrase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWX1_9STRA) HSP 1 Score: 158 bits (399), Expect = 6.450e-45 Identity = 77/143 (53.85%), Postives = 103/143 (72.03%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVN---VTDIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDF 423
GLD GE+FV RNV NL V+N + L+ + +AV V DIIVCGHYGCGGVR AMENK+ LL++WL ++RD+ RLH DEL+ + DER+ R VELNVQ+ C+N+F +VQ +Q + P IHG +YD+ TG LK+L+ D+
Sbjct: 73 GLDPGEMFVHRNVANLMVSNDQNALSVVQFAVETLKVKDIIVCGHYGCGGVRAAMENKHIGLLDNWLRSVRDICRLHKDELELLP-ADERYHRVVELNVQKQCLNIFKTNMVQHRQGREDQPNIHGLVYDIHTGALKELEVDY 214
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Match: F0WR55_9STRA (Carbonic anhydrase n=2 Tax=Albugo TaxID=65356 RepID=F0WR55_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.810e-44 Identity = 81/144 (56.25%), Postives = 102/144 (70.83%), Query Frame = 1
Query: 4 GLDMGELFVVRNVVNLCVNNHHSFLTALTYAVN---VTDIIVCGHYGCGGVRTAMENKNHDLLEHWLLNIRDVNRLHLDELKAIEDIDERHRRFVELNVQESCINLFANPVVQKKQANDSMPKIHGWMYDVGTGGLKKLDTDFK 426
GL GE+FV RNV N+ V N S L + +AV V DIIVCGHYGCGGVR AMENK+ LL++WL NIRDV R+HL+E++AIED D+R R VELN E CIN+F +VQ+ QA P+IHG +Y++ G LK+LD +FK
Sbjct: 81 GLAPGEMFVHRNVANMVVANDLSSLAVVQFAVEHLKVKDIIVCGHYGCGGVRAAMENKHMGLLDNWLRNIRDVCRIHLEEVEAIEDSDKRLDRMVELNTIEQCINMFKIGLVQRHQAKYGFPRIHGLVYNIKDGQLKELDVNFK 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122095.1689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig122095.1689.1 >prot_H-elongata_contig122095.1689.1 ID=prot_H-elongata_contig122095.1689.1|Name=mRNA_H-elongata_contig122095.1689.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp MGELFVVRNVVNLCVNNHHSFLTALTYAVNVTDIIVCGHYGCGGVRTAMEback to top mRNA from alignment at H-elongata_contig122095:578..1973+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig122095.1689.1 ID=mRNA_H-elongata_contig122095.1689.1|Name=mRNA_H-elongata_contig122095.1689.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1396bp|location=Sequence derived from alignment at H-elongata_contig122095:578..1973+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig122095:578..1973+ >mRNA_H-elongata_contig122095.1689.1 ID=mRNA_H-elongata_contig122095.1689.1|Name=mRNA_H-elongata_contig122095.1689.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=828bp|location=Sequence derived from alignment at H-elongata_contig122095:578..1973+ (Himanthalia elongata Himel1 dioecious)back to top |