mRNA_H-elongata_contig12163.1653.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: D7G1I7_ECTSI (Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI) HSP 1 Score: 630 bits (1626), Expect = 9.160e-218 Identity = 344/541 (63.59%), Postives = 403/541 (74.49%), Query Frame = 2
Query: 32 MSTFEDIT------------DSAENADGGITQKLVDDMVPFLRDPRPEIRQVAAATAVAASATKEGVALLHDCGAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGAEKMAQAGLAGGT-REGQHVRSLARWLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYK--EGK------RKKGGQVFDQWQHCANVLCNVARIPEGRRAFKGPNSKLALRALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRRNEE--------AAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQDKQERIDFLKSLDAADGEKVETKKNDTPSGEENADKAISDLEIM--SAPGPSGTTAERTSYLREKLASETPEAESKDSTGKATDTGGGED-----EEVVGNEGVKAMNEMLSVFDDD 1546
MSTFE T + E G IT++L+++ VPFLRDPRPEIRQ AAATAVAASATKEGVALLH CGAVKWLCRISGDVG TI KDAVS LVNVSAEET V ALEDMCKAGIVNRMMEAVS E C P +RDLCLQLLANVTRVQ+GA K+AQ G+AGG REGQ++R LARWLA HPA+ GLPYP LVGGSR+DA VVDRRAA+R+ DD EG+ +KGG+V DQWQHCA+VLCN ARIPEGRRA + P+ +AL +LPQL+S NPVRRWG+AGC+RNCCFEELDHPWLLHEV++VP++L RL+DD DEYDF+EKV+LDPRVWR+ +E AAPRRRE V+CIKRD++EALLQLCA L+SRQSLRK GVYFVIRE+DKS+PD E SQ+CYNLVNFLQRDEQDKQ RID+LKSL ++G++ + P+ E + S++E+M S P G+TA+RT++LR+KL E EE VG EG AM EMLS FDDD
Sbjct: 26 MSTFEGATAGTKTTGEQTEGNHGERNTGSITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVG--TIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCIPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQADDXXXXEGRGATQKRERKGGEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWGVAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEKEEGSYEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLADSEGKEAAGSAGEDPATTEPS----SEIEVMPPSTASP-GSTADRTAFLRDKLVVENGXXXXXXXXXXXXXXXXXXXXXXXVEEFVGEEGGDAMIEMLSAFDDD 559
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: A0A835YVT2_9STRA (DUF383 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT2_9STRA) HSP 1 Score: 219 bits (558), Expect = 4.190e-60 Identity = 151/378 (39.95%), Postives = 199/378 (52.65%), Query Frame = 2
Query: 98 VDDMVPFLRDPRPEIRQVAAATAVAASATKEGVALLHDCGAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAV--SAEDCAPLLRDLCLQLLANVTRVQLGAEKMAQAGLAGGTREGQHVRSLARWLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGRRAFKGPNSKLALRALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRR--NEEAAP-RRRESVECIKRDLLEALLQLCATLDSRQSLRKM-----GVYFVIRELDKSDPDGESSQICYNLVNFL 1201
V ++VPFLRD RP++R+ AA T + +AT+EG +L++ GAV WLC++ GDV IAKD+++AL+N A+ T E M +GIVN +ME V ++DC P RDLCL LLANVT + G E+M Q G GG EG HVR LAR ALV G DQWQH A++LCNV R GR+ ++ + L LLPQL S RR GI+GC+RN CF+ HP LL +++P+VL L+ D Y F +KV LDP VWR E A RE + +LLEAL LCA +S +LRK G Y V+RE + + D C+ + L
Sbjct: 8 VAEIVPFLRDSRPDLRKAAANTCMQLAATEEGRLMLYEAGAVPWLCKLVGDVD--AIAKDSITALINTGADVPAAT--EQMVNSGIVNSVMEVVVDQSQDCTPRRRDLCLTLLANVTTTEPGVERMLQLGGKGGP-EGLHVRRLAR--------------ALVTTLXXXXXXXXXXXXXXXXXXXXXXXG--------VDQWQHAASLLCNVTREETGRQILARADTGV-LEDLLPQLRSAVAARRRGISGCIRNLCFDAKLHPRLLDGARVLPHVLRGLASSRDAYSFQDKVALDPMVWRAPAGEGAMTFHEREPDAETRGNLLEALQLLCAHPESCAALRKQATLLQGTYCVVRETARRETDERLLVACHAIATAL 357
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: A0A024UB25_9STRA (Protein HGH1 homolog n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UB25_9STRA) HSP 1 Score: 149 bits (375), Expect = 4.660e-35 Identity = 122/388 (31.44%), Postives = 188/388 (48.45%), Query Frame = 2
Query: 98 VDDMVPFLRDPRPEIRQVAAATAVAASATKEGVALLHDCGAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGAEKMAQAGLAGGTREGQHVRSLARWLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGR--------RAFKGPNSKLALRALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLS-----DDADEYDFDEKV--VLDPRVWRRNEEAAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQ 1216
V ++V FL +PR ++RQ A V + T G+ L AVK LCR+ GD+ IA+DA+ ALVN++A T A E+ K IVNR+M + ++ +DL + LLANVT GA+ + RE R+L S P +GL A E D D +Q+ ANVL N+ ++ EGR + + + + + LLPQ+ SPN VRR G+ LRN CF+ +H +L + IV ++ RL+ +D+D+ V VL+P+ ++RE+ +++D++E LL LC++ + R LR+ VY ++R + D + S Y LV+FL RDE+
Sbjct: 7 VKELVEFLSNPRADVRQSAIQLTVGLTGTDSGIQQLIKADAVKALCRLIGDLN--AIARDAIHALVNITA--THPGACENALKHDIVNRLMNQLDSDFQH---KDLSVMLLANVTTTPDGAKALVTNDAKYSVREVILQNLTIRFLESEPEPDGLD------------------PATNEPKWD--------------DDYQYVANVLANITQLEEGRAFLLQLRPKQNQPGHVQSLVHVLLPQVHSPNVVRRRGVIQALRNLCFDSDNHFFLYDTLDIVAHMQRRLAGPEPMEDSDKVGMPASVLAVLNPK----------KKRETDAQVRKDIIECLLLLCSSRNGRNILRQKKVYPIVRNAHLVEADEDVSDQIYKLVDFLIRDEE 345
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: A0A0P1AT01_PLAHL (Protein HGH1 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AT01_PLAHL) HSP 1 Score: 148 bits (373), Expect = 1.080e-34 Identity = 121/403 (30.02%), Postives = 204/403 (50.62%), Query Frame = 2
Query: 92 KLVDDMVPFLRDPRPEIRQVAAATAVAASATKEGVALLHDC---GAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGAEKM-------AQAGLAGGTREGQHVRSLAR-WLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGRRAFKGPNSKLALR-ALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRRNEEAAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQDKQERIDFLKSLDAAD 1264
K ++++V FL PRPE+R+ +++ V +A+ +G+ L V+ LCR+ D+ IA+D + AL+N++A + + E + K ++NR+M V +D L D + LLANVT GA+ + A LA RE + +R+L +L+ P +G+ G D D +Q+ AN+L N++++ +GR +L ALLPQL SPN VRR GI L+N CF+ +H +L ++ I +++ LS +E D D+K+ ++P V+ + ++ ++RE ++ + ++ LL LC TL+ RQ LR+ VY +IR + D E Y LV+FL RDE+ ++ D +++ AD
Sbjct: 11 KSIEELVSFLSHPRPELRKSSSSLIVNMTASDQGIYQLQQLKNFDVVQALCRVVSDMRP--IAEDGIKALINITAADP--ASCERVLKYDLLNRVMTQVEDDDWC--LTDYSMMLLANVTTTPEGAKALLGYNDEATDAILA--LRE-KKIRTLTTLFLSGQPEPDGIA--CSTGEPNWD------------------------------DDYQYVANILANISQLEQGRDFLLKMRQNTSLASALLPQLQSPNVVRRRGITAALKNLCFDTDNHFYLYDQLDIPTHLMVLLSG-PEELDEDDKIGMNPIVYNQGDK---KKREYDRLVRLNAVDCLLLLCTTLNGRQVLRRKQVYPIIRNAHLVESDEEIGDQIYKLVDFLIRDEEGEEPNWDDVRTKSFAD 368
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: A0A2P4WXK1_9STRA (Protein HGH1 homolog (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXK1_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.920e-34 Identity = 119/387 (30.75%), Postives = 197/387 (50.90%), Query Frame = 2
Query: 92 KLVDDMVPFLRDPRPEIRQVAAATAVAASATKEGV---ALLHDCGAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGA-------EKMAQAGLAGGTREGQHVRSLAR-WLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGRR-AFKGPNSKLALRALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRRNEEAAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQ 1216
K ++++V FL PRPE+R+ A++ + +A+ +G+ L ++ LCR+ D+ IA+DA+ AL+N++A A E K ++NR+M V ED L D + LLANVT GA +K A LA RE + +R+L +L P +G+ + G + D D++Q+ AN+L N++++ +GR K S ALLPQL SPN VRR G+ L+N CF+ +H +L ++ I +++ L+ +E D D+K+ ++P V+ + ++ ++RE ++ ++ LL LC T + R+ LR+ VY +IR+ +PD E Y LV+FL RDE+
Sbjct: 11 KSMEELVSFLSHPRPELRKSASSLLINMTASDQGMFQLLQLKKLDVMQALCRVVSDMRP--IAEDAIKALINLTAANP--AACERALKYDLLNRVMTQV--EDDEWRLTDYSMMLLANVTTTPEGAKALLGYDDKSTDASLA--LRE-KKIRTLTNSFLEGEPEPDGVD--SATGEPKWD------------------------------DEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLPQLKSPNVVRRRGVTAALKNLCFDSDNHFYLYDQLDIPTHMMVLLAG-PEELDEDDKMGMNPVVYSQGDK---KKREHDRLVRLAAVDCLLLLCTTRNGRKELRRKKVYPIIRDAHLVEPDEEIGDQIYKLVDFLIRDEE 352
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: A0A8K1CI53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI53_PYTOL) HSP 1 Score: 147 bits (370), Expect = 2.080e-34 Identity = 124/395 (31.39%), Postives = 202/395 (51.14%), Query Frame = 2
Query: 92 KLVDDMVPFLRDPRPEIRQVAAATAVAASATKEGV-ALLH--DCGAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGAEKM----AQAGLAGGTREGQHVRSLA-RWLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGRR-AFKGPNSKLALRALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRRNEEAAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQDKQERIDFLKS 1249
K ++D+V FL PRPE+R+ A++ V SA+ + V LLH ++ LCR+ D+ IA+DA+ AL+N++A A E K ++NR+M + ED L++L + LLANVT + GA + QAG A + +R+L ++ S P +G+ D G+ K D++Q+ A +L N++++ EGR+ K N K + ALLPQL SPN VRR GI ++N CF+ H +LL++ +P L L + D +EK+ + P V++ + ++RE ++ ++ALL L + + R +LR+ VY +IR +PD E Y LV+FL RDE+ ++ D +++
Sbjct: 5 KTLEDLVGFLSSPRPELRKSASSMLVNLSASDQAVYQLLHLQKNDVIQGLCRVVSDLRP--IAEDAIKALINLTAIHP--DASERTIKFDLLNRVMTQL--EDDEWRLKNLSMMLLANVTTTEAGARALIGADTQAGAATAAYREKKIRTLTVSFMESEPEPDGV----------------------------DADSGEAKWD----DEYQYVAVILGNISQLEEGRQFILKVRNGKTLIEALLPQLRSPNLVRRRGITALIKNLCFDTDSH-FLLYDHLDIPSKLMYLLAGPEPLDPEEKIGMHPDVYKLGPK---KKREHDRFVRLACVDALLLLGTSRNGRNNLRQKKVYPIIRNAHLVEPDEEIGDQIYKLVDFLIRDEEGEEPDWDKIRT 357
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: A0A662XPP2_9STRA (Protein HGH1 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPP2_9STRA) HSP 1 Score: 146 bits (369), Expect = 4.510e-34 Identity = 122/406 (30.05%), Postives = 206/406 (50.74%), Query Frame = 2
Query: 92 KLVDDMVPFLRDPRPEIRQVAAATAVAASATKEGV---ALLHDCGAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGAEKM----AQAGLAGGTREGQHVRSLAR-WLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGRR-AFKGPNSKLALRALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRRNEEAAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQDKQERIDFLKSLDAADGEKVET 1282
K ++++V FL PRPE+R+ A++ ++ +A+ + V L V+ LCR+ D+ IA+DA+ AL+N++A TA E K ++NR+M V ED L D + LLANVT GA ++ A+A A + +R+L +L S P EG+ A G ++ D D++Q+ AN+L NV+++ +GR K + AL+PQL SPN VRR G+A L+N CF+ +H +L ++ VP + L + D ++K+ + P V+ + ++ ++RE ++ ++ LL LC T + R+ LR+ VY +IR +PD E Y LV+FL RDE+ ++ + +++ A ++ +T
Sbjct: 11 KSMEELVSFLSHPRPELRKSASSLLISMTASDQSVFQLLALPKLDVVQALCRVVSDMRP--IAEDAIKALINLTAANP--TACERALKYDLLNRVMTQV--EDSEWRLTDYSMMLLANVTTTPEGAMELLGYDAKATDATLALREKKIRTLTNAFLESEPEPEGVD--AATGDAKWD------------------------------DEYQYVANILANVSQLEQGRAFLLKMRQDTSLVGALMPQLKSPNVVRRRGVAAALKNLCFDSDNHFYLYDQLD-VPTNMMCLLAGPEPLDEEDKLGMSPVVFSQGDK---KKREQDRQVRLAAVDCLLLLCTTRNGRKDLRRKKVYPIIRNAHLVEPDEEIGDQIYKLVDFLIRDEEGEEPDWNDIRAKSFASDQETKT 374
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: A0A1V9Z507_9STRA (Protein HGH1 homolog n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z507_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.360e-33 Identity = 123/388 (31.70%), Postives = 187/388 (48.20%), Query Frame = 2
Query: 104 DMVPFLRDPRPEIRQVAAATAVAASATKEGVALLHDCGAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGAEKMAQAGLAGGTREGQHVRSLARWLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGR------RAFKGPNSKLALRALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRRNEEAAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQDKQERIDFLKS 1249
++V FL PR ++RQ A A+ +AT GV L AVK LCR+ DV TIA+DA+ ALVN++A T A E K IVNR+M + ++ +DL + LLANVT GA+ + RE + +L S P EG+ D G+ K D +Q+ ANVL N+ ++ EGR R P K + LLPQ+ SPN VRR GI +RN CF+ +H +L + +V ++ RL+ + + DEK + V A ++RES +++ +E L+ C++ + R LR+ VY ++R + + E S Y LV+FL RDE+ ++ D +++
Sbjct: 8 ELVGFLSSPRADLRQSAMQLALGLTATDAGVLSLIKADAVKALCRLVSDVN--TIARDAIHALVNMTA--THPVACETALKFDIVNRLMNQLDSDFAH---KDLSMMLLANVTTTPDGAKALVANDAKYKVREVILQKLTMLFLESEPEPEGI----------------------------DLATGEPKWD----DDYQYIANVLANITQLEEGRDFLLQMRQSSTP-PKALVEVLLPQIHSPNVVRRRGIVQAVRNLCFDSDNHFFLYDTLDVVGHMQKRLAG-PEPLELDEKNGMTNLVL--GCLGAKKKRESDVAVRQAAVECLILFCSSRNGRNVLRQKKVYPIVRNAHLVEANDEVSDQIYKLVDFLIRDEEGEEPDWDEIRA 352
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: K3WKR7_GLOUD (Protein HGH1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKR7_GLOUD) HSP 1 Score: 144 bits (364), Expect = 2.090e-33 Identity = 125/405 (30.86%), Postives = 199/405 (49.14%), Query Frame = 2
Query: 86 TQKL-VDDMVPFLRDPRPEIRQVAAATAVAASATKEGVALLHDCG---AVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGAE-------KMAQAGLAGGTREGQHVRSLARWLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGRR-AFKGPNSKLALRALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRRNEEAAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQDKQERIDFLKSLDAAD 1264
TQK V+++V FL PRPE+R+ A++ V +A+ +G+ L ++ LCR+ D+ IA+DA+ AL+N++A A E K ++NR+M + ++ L+D + LLANV+ GA K A LA RE + +L S EG+ D + G K D++Q+ AN+L N++++ EGR K + + LLPQL SPN VRR GIA +RN CF+ +H +L ++ I P ++ L + D D+KV L P V+R E+ ++RE + ++ ++ LL LC T + R LR+ VY ++R +P+ E Y LV+FL RDE ++ + ++S AD
Sbjct: 10 TQKTSVEELVSFLSHPRPELRKSASSLLVNMTASDQGIHQLMQLAKFDVIQALCRVVSDMRP--IAEDAIKALINITAANP--AACERTLKFDLLNRVMTQIDDDEWR--LKDYSMMLLANVSTTPEGARALMGYDAKSTDALLA--LREKKMRTLTTLFLESEAEPEGI----------------------------DQETGDAKWD----DEYQYVANILANISQLAEGRDFLLKNRGNTTLIAELLPQLRSPNVVRRRGIASVVRNLCFDTDNHFFLYDQLDI-PSKMNYLLAGPEPLDEDDKVGLHPSVYRLGEK---KKREKDKQVRLYAVDCLLLLCTTRNGRNDLRRKKVYPIVRNAHLVEPEEEIGDQIYKLVDFLIRDEDGEEPDWNEIRSKAYAD 370
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Match: A0A067D6J1_SAPPC (Protein HGH1 homolog n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D6J1_SAPPC) HSP 1 Score: 143 bits (361), Expect = 2.730e-33 Identity = 121/378 (32.01%), Postives = 185/378 (48.94%), Query Frame = 2
Query: 104 DMVPFLRDPRPEIRQVAAATAVAASATKEGVALLHDCGAVKWLCRISGDVGQVTIAKDAVSALVNVSAEETMVTALEDMCKAGIVNRMMEAVSAEDCAPLLRDLCLQLLANVTRVQLGAEKMAQAGLAGGTREGQHVRSLARWLASHPAEEGLPYPALVGGSREDAHVVDRRAAVREAVIDDYKEGKRKKGGQVFDQWQHCANVLCNVARIPEGR------RAFKGPNSKLAL-RALLPQLSSPNPVRRWGIAGCLRNCCFEELDHPWLLHEVQIVPYVLSRLSDDADEYDFDEKVVLDPRVWRRNEEAAPRRRESVECIKRDLLEALLQLCATLDSRQSLRKMGVYFVIRELDKSDPDGESSQICYNLVNFLQRDEQ 1216
++V FL PR ++RQ A A+ +AT GV L AVK LCR+ DV TIA+DA+ ALVN++A T A E + IVNR+M + ++ +DL + LLANVT GA+ + RE +L S P +G+ D G+ K D +Q+ ANVL N+ ++ EGR R + ++ AL + LLPQ+ SPN VRR GI +RN CF+ +H +L + +V ++ RL + + +EK L V + ++RES + +++ ++E LL LC++ + R LR+ VY ++R + + E S Y LV+FL RDE+
Sbjct: 8 ELVGFLSSPRADLRQSAMQLALGLTATDAGVHQLIKADAVKALCRLVSDVN--TIARDAIHALVNITA--THPVACESALQFDIVNRLMNQLDSDFAH---KDLSMMLLANVTTTPDGAKALVANDAKYKVREVILQNLTMLFLESEPEPDGV----------------------------DLASGEPKWD----DDYQYIANVLANITQLEEGRDFLLQMRKTEASSTPQALVQVLLPQIHSPNVVRRRGIVQAVRNLCFDSDNHFFLYDSLDVVGHMQKRLVG-PEPLELEEKNGLSALVL--SSLGPKKKRESDDVVRQAVVECLLLLCSSRNGRNVLRQRKVYPIVRNAHIVEGNDEISDQIYKLVDFLIRDEE 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12163.1653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12163.1653.1 >prot_H-elongata_contig12163.1653.1 ID=prot_H-elongata_contig12163.1653.1|Name=mRNA_H-elongata_contig12163.1653.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=506bp MSTFEDITDSAENADGGITQKLVDDMVPFLRDPRPEIRQVAAATAVAASAback to top mRNA from alignment at H-elongata_contig12163:1169..8666+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12163.1653.1 ID=mRNA_H-elongata_contig12163.1653.1|Name=mRNA_H-elongata_contig12163.1653.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7498bp|location=Sequence derived from alignment at H-elongata_contig12163:1169..8666+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12163:1169..8666+ >mRNA_H-elongata_contig12163.1653.1 ID=mRNA_H-elongata_contig12163.1653.1|Name=mRNA_H-elongata_contig12163.1653.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3036bp|location=Sequence derived from alignment at H-elongata_contig12163:1169..8666+ (Himanthalia elongata Himel1 dioecious)back to top |