mRNA_H-elongata_contig12105.1617.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12105.1617.1
Unique NamemRNA_H-elongata_contig12105.1617.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A835Z6S0_9STRA (GH26 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S0_9STRA)

HSP 1 Score: 263 bits (671), Expect = 2.250e-75
Identity = 160/362 (44.20%), Postives = 197/362 (54.42%), Query Frame = 1
Query:    1 RFKYKGTFNEVWTLRAFGYQYMMS--ALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAFEPQKTRIVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETK-----------DAGT--LLRARRVDEGVRHRLWVIGKYDTSVRLHVPLGASAVVFAVPCPLE-GYRSDVSVVTGGILRMDASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGFHI 1038
            R+ Y G  NE+W  RA G+ Y++    ++ RIAR +E ++R AD+ G+ VLGLGALNKAEFIN GG+D ++A  P+ TR+VHGNTLTAAVVVEN+ +A                               AA +       P VFLTG+TSKVGRAVAL+LAL G  V+CC+SS  RF +L  +L  L                                              DA    L R   V +GV   LW +GK D +V  H+P GA+AVVFAVP PL  G RSDV++V GG L +DA+ C  R    LLP D +YACHAAA VH    W HHEVG VDV RM PTLQAA DCGF +
Sbjct:   31 RYTYDGLVNELWLSRAPGFMYLLPWRFMQSRIARNVEDMLRSADRQGIQVLGLGALNKAEFINRGGDDTLSAVRPKFTRLVHGNTLTAAVVVENIMRAI------------------------------AARQRGHEQQEPTVFLTGATSKVGRAVALQLALRGVRVLCCTSSAPRFQALLSDLNTLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADARPPLLTRCAHVSDGVHCALWAVGKSDAAVAAHLPRGATAVVFAVPSPLPAGQRSDVTLVDGGTLLLDAARCGRRALGLLLPHDAVYACHAAAAVHAARHWTHHEVGPVDVHRMAPTLQAAFDCGFRL 362          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A6H5JP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP11_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 9.880e-56
Identity = 96/125 (76.80%), Postives = 107/125 (85.60%), Query Frame = 1
Query:  664 AGTLLRARRVDEGVRHRLWVIGKYDTSVRLHVPLGASAVVFAVPCPLEGYRSDVSVVTGGILRMDASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGFHI 1038
            AG L RARR+DEGV  RLWV+GK+DTSVRLH+PL ASAVVFAVPCPLEG+R DV+ VTGGI+RMD S C+ RRFH LLPFDQLYACHAAAIVH+RMGW HHEVGKVDV RM   L+AA DCGF +
Sbjct:    5 AGGLKRARRLDEGVYFRLWVVGKFDTSVRLHIPLKASAVVFAVPCPLEGHRPDVTSVTGGIVRMDLSCCTARRFHVLLPFDQLYACHAAAIVHHRMGWAHHEVGKVDVGRMATILKAAGDCGFSV 129          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: L1J6G4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC)

HSP 1 Score: 190 bits (483), Expect = 2.600e-50
Identity = 131/364 (35.99%), Postives = 167/364 (45.88%), Query Frame = 1
Query:    4 FKYKGTFNEVWTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAFEPQKTR----IVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKYDTSVRLHVPLGASAVVFAVPCPLEGY---------------RSDVSVVTGGILRMDASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGFHI 1038
            F + G  N VW  R FG+Q++    R      I  I+READ+ G  VLGLGALNKAEF+N  GE+LV    P+ T+    +VHGNTLTAAVVVENV + F +                                E+   +   VFLTG TSK   ++A                                         L L +G                     ++  AR + +GV  R+WV+GKYD  VR H+P    AVVF+VPCPL G                R DV+V+ GG+LRM    CS R F  LLP  ++YACHAAA+VH  MGW  HEVG+VD+S++   L AA   GF I
Sbjct:  472 FSFSGCRNSVWLSRLFGWQFISFPRRAH--DNICEILREADRLGYKVLGLGALNKAEFVNKSGEELVREVNPKTTKALNQVVHGNTLTAAVVVENVIELFRQS-------------------------------EQSCEMRREVFLTGPTSKDSMSLAT----------------------------------------LHLPQG---------------------SIRYARSLQDGVFCRVWVVGKYDLGVREHIPRDGIAVVFSVPCPLTGNVLSVESAMNSRYIRERKDVTVIDGGLLRMQPERCSKRSFSILLPEHEVYACHAAAMVHANMGWDEHEVGEVDLSKLPVVLHAAKAMGFEI 741          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A812YZZ0_9DINO (CER3 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812YZZ0_9DINO)

HSP 1 Score: 153 bits (386), Expect = 1.760e-37
Identity = 119/345 (34.49%), Postives = 158/345 (45.80%), Query Frame = 1
Query:   10 YKGTFNEVWTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAFEPQKTRIVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKYDTSVRLHVPLGASAVVFAVPCPLE-GYRSDVSVVTGGILRMD-ASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGFHI 1038
            Y G   + W L  FGYQY++   R  +A  I      A+K G  VL LGALNKAE++N+GG  L+        R+VHGNTLTAA VVE  +  F                           G  ++ R         +F+TG++SKVG AVAL+L   GY V+  SS  ER   L  + R L + S                                A  L     + +GV    WV+GK+D  V  ++P  + AVVF+VP PLE   R DV    GGIL +D A L  PR+F  LL  +++YACHAA I+         E+G+V V  M    +AA   GF +
Sbjct:  226 YAGVHMQNWVLACFGYQYLLWPFRSFVAARIAQSASMAEKRGAKVLCLGALNKAEWMNNGGLSLLRGLHGG-ARLVHGNTLTAAAVVEAARSLF---------------------------GPPSSVRAP-------IFVTGASSKVGVAVALRLLQLGYPVLAHSSDPERLRRLGAKARQLHAAS--------------------------------ASNLQVTTALAKGVDTAYWVVGKHDPRVAQYLPRDSRAVVFSVPNPLEESLRKDVVWAPGGILHLDTARLGKPRQFSNLLAENEIYACHAAGILTAAHADWKDELGEVCVDAMSVQWEAALQMGFSL 503          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A812V2L4_9DINO (CER3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V2L4_9DINO)

HSP 1 Score: 152 bits (385), Expect = 2.480e-37
Identity = 122/338 (36.09%), Postives = 162/338 (47.93%), Query Frame = 1
Query:   34 WTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAFEPQKTRIVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKYDTSVRLHVPLGASAVVFAVPCPLE-GYRSDVSVVTGGILRMDAS-LCSPRRFHFLLPFDQLYACHAAAIVHY-RMGWRHHEVGKVDVSRMEPTLQAAHDCGFHI 1038
            W L  FGYQY++   R  +A  I      A++ G  VL LGALNKAE++N+GG  L+        R+VHGNTLTAA VVE     F                     G V++   TA            +F+TG++SKVG AVAL+L   GY V+  SS  ER   L  + + L        G  LA                          L     + EGV    W+IGK+D+ V  ++P G+ AVVF+VP PLE   R DV  V GGIL +D + L  PR+F  LL  +++YACHAA IV      W+  E+G+V V  M    +AA + GF +
Sbjct:  628 WVLACFGYQYLLWPFRSFVAARIAQSAAMAEERGARVLSLGALNKAEWMNNGGLALLRGLGGG-VRLVHGNTLTAAAVVEAASALF---------------------GPVSSV--TAP-----------IFVTGASSKVGAAVALRLLQLGYPVLAHSSDPERLRRLDAKAQQL--------GANLATN------------------------LQVTTALVEGVHTTHWIIGKHDSRVAQYLPRGSRAVVFSVPNPLEESGRKDVVWVPGGILHLDPTRLAKPRQFSNLLADNEIYACHAAGIVTAANPDWKD-ELGEVCVDAMSTQWEAALEMGFSL 897          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A6T5ZM02_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6T5ZM02_9CHLO)

HSP 1 Score: 142 bits (358), Expect = 3.750e-34
Identity = 108/339 (31.86%), Postives = 153/339 (45.13%), Query Frame = 1
Query:   28 EVWTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAFEPQ-KTRIVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKYDTSV-RLHVPLGASAVVFAVPCPLEGYRSDVSVVTGGILRMDASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGFHI 1038
            E W   A+G+Q+ M +    I + IE  +  ADK+GV VLGLGALNK E +N GG   VN      KTR+VHGNTLTAA +++ +          P D                        +E        +FLTGSTSK+GRA+AL +A  G  VV  ++SDERF  ++ E                                      KD   L++++ + +G   + WVIGK+ +   +   P GA    F VP P+   R D         ++       R     +   Q++ACHA A+VH   GW HHEVG +D +R++ T +AA   GF +
Sbjct:  359 ETWVTPAWGFQFFMKSEFNHINKKIEQAILSADKSGVKVLGLGALNKNEALNGGGSLFVNKHGKHLKTRVVHGNTLTAAAILQKI----------PSD-----------------------CKE--------IFLTGSTSKLGRAIALYMAERGVRVVMYTTSDERFEKIRNE-----------------------------------AAKKDQHLLVQSKSLSDGAACKDWVIGKHCSERDQQSAPRGAVFHQFVVP-PIPESRKDCVYTDLPAFKLPKDAKDFRSCEMTMERGQVHACHAGALVHSLEGWDHHEVGAIDHTRIDETWEAAIKHGFSL 620          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A438JWM0_VITVI (Protein ECERIFERUM 3 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JWM0_VITVI)

HSP 1 Score: 132 bits (331), Expect = 2.030e-32
Identity = 99/341 (29.03%), Postives = 149/341 (43.70%), Query Frame = 1
Query:   13 KGTFNEVWTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAFEPQKTRIVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKYDTS-VRLHVPLGASAVVFAVPCPLEGYRSDVSVVTGGILRMDASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGF 1032
            +G  ++ W +  +G+QY +S  R  I + IE  + EAD+ GV V+ L ALNK E +N GG   VN     + R+VHGNTLTAAV+++ + Q                          N T               +VFLTG+TSK+GRA++L L  +   V+  + S ERF S+Q E               +  Q+                       L++  +       + W+IGK+ T   +   P G     F VP P+ G+R D +      +R+   +       + +    L+ACHA  +VH   GW HHEVG +DV +++    AA   GF
Sbjct:   27 RGRLHQTWMVPRYGFQYFLSFAREGINKVIEEAILEADRMGVKVISLAALNKNESLNGGGTLYVNKHPNLRVRVVHGNTLTAAVILKEIPQ--------------------------NAT---------------QVFLTGATSKLGRAISLYLCREKICVLMLTQSSERFESIQREAP-------------IDCQK----------------------FLVQVTKYQAAQHCKTWIIGKWCTPREQSWAPPGTHFHQFVVP-PILGFRRDCTYGKLAAMRLPEDVEGLGYCEYTMERGVLHACHAGGVVHLLQGWTHHEVGAIDVDQIDVVWTAALSHGF 290          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A090MA01_OSTTA (Uncharacterized domain Wax2, C-terminal n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090MA01_OSTTA)

HSP 1 Score: 137 bits (344), Expect = 3.070e-32
Identity = 104/339 (30.68%), Postives = 152/339 (44.84%), Query Frame = 1
Query:   28 EVWTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAF-EPQKTRIVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKY-DTSVRLHVPLGASAVVFAVPCPLEGYRSDVSVVTGGILRMDASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGFHI 1038
            E W   A+G+Q+ M +    I + IE  + +ADK+GV V+GLGALNK E +N GG   VN   +  KTR+VHGNTLTAA +++ +          P D                        +E        +FLTG+TSK+GRA+AL  A  G  VV  ++S+ERF  ++ E                                      KD    +++  + +G   + WVIGK+     +   P GA+   F VP P+   R D         ++       R     +P   ++ACHA A+VH   GW HHEVG +D +R++ T +AA   GF +
Sbjct:  359 ETWVTPAWGFQFFMKSEFNHINKKIEEAILDADKSGVQVVGLGALNKNEALNGGGALFVNKHGKSLKTRVVHGNTLTAAAILQKI----------PND-----------------------CKE--------IFLTGATSKLGRAIALYCAERGVRVVMYTTSEERFEMIRAE-----------------------------------APKKDQHLFVQSTSLTDGANIKDWVIGKHCSMKDQKSAPRGATFHQFVVP-PIPESRKDCVYTDLPAFKLPRESKDFRSCEMTMPRGHVHACHAGALVHALEGWDHHEVGAIDHTRIDLTWEAALKHGFSL 620          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A061R154_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R154_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 7.900e-32
Identity = 102/339 (30.09%), Postives = 150/339 (44.25%), Query Frame = 1
Query:   28 EVWTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAFEPQK---TRIVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKY-DTSVRLHVPLGASAVVFAVPCPLEGYRSDVSVVTGGILRMDASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGF 1032
            + W    FG+QY +   R RI + I+  + +AD+ G+ V+GLGALNKAE +N GG+ +++    ++    R+VHGNTLTAA V++ +    E                                          +FLTGSTSK+GRA+AL L+  G  V+  + S ERF +++ E +                                         L+ A  + EG R   WV+G     + + H P GA    F VP P+   R+D        +R+ A     R     +    ++ACHA A+VH   GW HHEVG +DVSR++ T +AA   GF
Sbjct:  356 QTWCTPRFGFQYFLPFERKRINKLIKDAIVKADRLGIQVIGLGALNKAEPLNGGGKQILDEILEERELNVRVVHGNTLTAACVLKELPAGVEE-----------------------------------------IFLTGSTSKLGRAIALYLSARGTRVIMYTKSAERFEAVRSEAKPEHRH-----------------------------------LLVHATSLSEGSRCNRWVVGTLLGAADQKHAPPGAFFHQFVVP-PIREARADCKYGKLAAMRLPAKALM-RACEMTMERGCVHACHAGALVHALEGWEHHEVGAIDVSRIDDTWEAAMRHGF 616          
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Match: A0A176VX58_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VX58_MARPO)

HSP 1 Score: 135 bits (339), Expect = 1.480e-31
Identity = 99/338 (29.29%), Postives = 149/338 (44.08%), Query Frame = 1
Query:   22 FNEVWTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLGLGALNKAEFINHGGEDLVNAFEPQKTRIVHGNTLTAAVVVENVKQAFERGIDVPGDPDXXXXXXXXXXGEVNTTGNTAAAREEKTALPPRVFLTGSTSKVGRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQEGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKYDT-SVRLHVPLGASAVVFAVPCPLEGYRSDVSVVTGGILRMDASLCSPRRFHFLLPFDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGF 1032
            F + W +  +G+QY ++  + RI R IE  + +A   G  V+ LGALNK E +N GG          K R+VHGNTLTAA +++ + +      DV                                     +FLTG+TSK+GRA+AL L   G  V+  ++S +RF S+                    L E   D   +               L++  +  +G   + WV+GK+ T   + + P G     F VP PLE  R D +  T   +++  ++   R     +P   ++ACHA  +VH   GW HHEVG +DV R++ T +AA   GF
Sbjct:  358 FTQTWVIPRYGFQYFLNFEKNRINRLIEEAILKAQDKGCKVISLGALNKNEALNGGGTLFTEKHPDLKIRVVHGNTLTAATILDKIPR------DVT-----------------------------------EIFLTGATSKLGRAIALYLCRRGVRVLMLTTSRDRFESI--------------------LHEAPVDCQRY---------------LVQVTKYQDGADCKTWVMGKWATPKQQSYAPSGTHFHQFVVP-PLEPARKDCTYGTLAAMQLPKAMRGLRTCEMTMPRGCVHACHAGGLVHALEGWTHHEVGAIDVERIDLTWKAAMKHGF 618          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12105.1617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6S0_9STRA2.250e-7544.20GH26 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5JP11_9PHAE9.880e-5676.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L1J6G4_GUITC2.600e-5035.99Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A812YZZ0_9DINO1.760e-3734.49CER3 protein n=2 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A812V2L4_9DINO2.480e-3736.09CER3 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A6T5ZM02_9CHLO3.750e-3431.86Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A438JWM0_VITVI2.030e-3229.03Protein ECERIFERUM 3 n=2 Tax=Vitis vinifera TaxID=... [more]
A0A090MA01_OSTTA3.070e-3230.68Uncharacterized domain Wax2, C-terminal n=2 Tax=Os... [more]
A0A061R154_9CHLO7.900e-3230.09Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
A0A176VX58_MARPO1.480e-3129.29Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12105contigH-elongata_contig12105:851..6392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.4
Seed ortholog evalue1.8e-46
Seed eggNOG ortholog55529.EKX44111
EggNOG free text desc.N,N-dimethylaniline monooxygenase activity
EggNOG OGsCOG2072@1,KOG1399@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-27_005930.1
Exons8
Model size1040
Cds size1038
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12105.1617.1prot_H-elongata_contig12105.1617.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12105 851..6392 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929711.5721924-CDS-H-elongata_contig12105:850..9791622929711.5721924-CDS-H-elongata_contig12105:850..979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 851..979 -
1691679128.4439006-CDS-H-elongata_contig12105:850..9791691679128.4439006-CDS-H-elongata_contig12105:850..979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 851..979 -
1622929711.5849247-CDS-H-elongata_contig12105:1534..16941622929711.5849247-CDS-H-elongata_contig12105:1534..1694Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 1535..1694 -
1691679128.4547615-CDS-H-elongata_contig12105:1534..16941691679128.4547615-CDS-H-elongata_contig12105:1534..1694Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 1535..1694 -
1622929711.5951474-CDS-H-elongata_contig12105:2488..27901622929711.5951474-CDS-H-elongata_contig12105:2488..2790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 2489..2790 -
1691679128.4642754-CDS-H-elongata_contig12105:2488..27901691679128.4642754-CDS-H-elongata_contig12105:2488..2790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 2489..2790 -
1622929711.6293395-CDS-H-elongata_contig12105:3284..33421622929711.6293395-CDS-H-elongata_contig12105:3284..3342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 3285..3342 -
1691679128.474232-CDS-H-elongata_contig12105:3284..33421691679128.474232-CDS-H-elongata_contig12105:3284..3342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 3285..3342 -
1622929711.6442633-CDS-H-elongata_contig12105:3375..35341622929711.6442633-CDS-H-elongata_contig12105:3375..3534Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 3376..3534 -
1691679128.4825406-CDS-H-elongata_contig12105:3375..35341691679128.4825406-CDS-H-elongata_contig12105:3375..3534Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 3376..3534 -
1622929711.6622374-CDS-H-elongata_contig12105:3839..39361622929711.6622374-CDS-H-elongata_contig12105:3839..3936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 3840..3936 -
1691679128.4987674-CDS-H-elongata_contig12105:3839..39361691679128.4987674-CDS-H-elongata_contig12105:3839..3936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 3840..3936 -
1622929711.6769538-CDS-H-elongata_contig12105:5895..59981622929711.6769538-CDS-H-elongata_contig12105:5895..5998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 5896..5998 -
1691679128.5068228-CDS-H-elongata_contig12105:5895..59981691679128.5068228-CDS-H-elongata_contig12105:5895..5998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 5896..5998 -
1622929711.6896071-CDS-H-elongata_contig12105:6362..63921622929711.6896071-CDS-H-elongata_contig12105:6362..6392Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 6363..6392 -
1691679128.5145843-CDS-H-elongata_contig12105:6362..63921691679128.5145843-CDS-H-elongata_contig12105:6362..6392Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12105 6363..6392 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12105.1617.1

>prot_H-elongata_contig12105.1617.1 ID=prot_H-elongata_contig12105.1617.1|Name=mRNA_H-elongata_contig12105.1617.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=346bp
RFKYKGTFNEVWTLRAFGYQYMMSALRGRIARGIETIVREADKNGVAVLG
LGALNKAEFINHGGEDLVNAFEPQKTRIVHGNTLTAAVVVENVKQAFERG
IDVPGDPDVTGDVDVTGCGEVNTTGNTAAAREEKTALPPRVFLTGSTSKV
GRAVALKLALDGYDVVCCSSSDERFASLQWELRALRSRSGKREGTGLALQ
EGFPDGGAFSGYSDGGVETKDAGTLLRARRVDEGVRHRLWVIGKYDTSVR
LHVPLGASAVVFAVPCPLEGYRSDVSVVTGGILRMDASLCSPRRFHFLLP
FDQLYACHAAAIVHYRMGWRHHEVGKVDVSRMEPTLQAAHDCGFHI
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mRNA from alignment at H-elongata_contig12105:851..6392-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12105.1617.1 ID=mRNA_H-elongata_contig12105.1617.1|Name=mRNA_H-elongata_contig12105.1617.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5542bp|location=Sequence derived from alignment at H-elongata_contig12105:851..6392- (Himanthalia elongata Himel1 dioecious)
CGTTTCAAATATAAGGGGACCTTTAACGAGGTACAGTACGCGACATATCT CAGTATCCCTGTCTCATTCCTCAATTACTTGGAACTAGTGTGTTAGTTGG GCGGTCGGATGCGGGCCGTTACGTCTGGCGTTCGTTCCTTTACTGAGGAA CTATTATTAGAACTACTGTTTCCTAAATACGATGCGTTTTGTTTGTTAGT TGTTTTTTACATGTATCGCAACTTATCATCCGTCATCTCCGCATTAAGCG GAATTGGAATTTGATAGTTTCATGACTGAAATATTATTCATGCTTACATC ACCGTAGTTGTTCGATTAAAAGGGCATCTAGCTGAAAGTATCAATCAACA ATAACAAAACTTGGTGCTGTTGGTGTATCTGCCGGCGGGAAAAGGTGTGG ACCCTCCGAGCCTTCGGCTACCAGTACATGATGAGCGCTCTGAGAGGAAG GATCGCCCGAGGCATCGAGACGATCGTTCGAGAAGCCGACAAAAACGGTT GAGTTTCAGTATGTCCAAACAATAGTACATCGTGTTTACTTTTTACCTAC CGCTATGCACTATAAGATAATCCAGTACTGTACCTCTTATAACATTAATA TAATCGTGTTTTTGCTCTAATTGCTTGCTTGACTCTGTTTGCATCGAACA TTTGCGTCCCTGCAGCTCGATTGTTTTATGCCTTGATTAATTGCCTTTTC TGCTTTCTTGCATATTTTCTTTGTATGTACTACATTACACATTTCGCTTA ACATGTAGGTGTGTTCATCACATAGACTGTAGCGGAGTAAAGATCAACCG GATTTGGTTGCCTCCTGCTTGTGGTCAACTGAACAGGAAAAACAACAATT TTCCCTGTTCCCGTTTGCCCCTGAGTATTTGGTCTCACGAGACGGGTTCG GCTGTCCCGTCCTGCGTCAGCCCGCTCATTCTCCCGACCCAGCATACTGA ATACTGAATGCTGAATATGGTGCGTACTCCCGGGATCATCTCGATCCTCT CGTTTTCCGCTACGTCGTCCATCTCTACTGTTCAACCGCCATCGGGTCAA TCTCGGTTTTATCAAGTCACGCAATTGCGTGCCGATGGCGTTTACCACCG AGAGCCCGTCGACACTGAGCCAGTTAATAGTCCTCAAAGTTGATTGAGTA GCGGGTGCAGCCTATTCAGGTAACCTCATGGATCAATTATTGTGCGCCTC GCTTTTCCCACACCTATTACAGTCACATACAGCATTATCGGTATCGGTTT TCTTGAGTATACGCACTACCGAACGGTAGGCCACGCAAAAGCATGCTTCG TGTACGTGCGTTGCCATCCGCGATCTCGAAAGTTAACATGTCCTCAAGTT TTTTCATACTGCTTGAGGTACTTGAAAGCAAATTATGCGGTAAATATCAT ACACGAACGCTCATTGGCGGGTCTTTGATGGGTTCTAGTGGACGGAAGTG CTCAGATTTCTCGCCACTGGGCGCCGCTGAGGATGAATTCACTAATCTTG CACTACACTCTACTACACTCTATTAGATCTATACTGTATAAGACTTTATT TCCAGTATGAACTAGATTTTCAAAATACACCACACTACACTTACCCTCGA CCGTTTAGCTTTATCTTGGTTCGAGGGAAAGAAAACTGTCAGCGCGGACT AACGGATGACGGAAAGACGGATGTACAGACGTAAAAGAAAAGGGACTAAA ATATGAAGGGAAGGCTTTTAGTAATGTTAAGAATAATTATGGCGTTGTTT GTTTTTTGTTGTTTGTTTAATCCTTTTTTTGTCGAAAATAACCCTGTAAC CCTACATGCAAACAAGCGGTCTTAATGCTTATTTAGAAAAACCTTAAACT CATTCCAACTCTCCGAACATCCACACCTTCTTAGCGCTGTGAGAGGTGCA GTCCAGGGGACCAACTATCGTCGGGTTCGAATGTGTACATTACTACCTTT GAGCACAAAATCGTCACATTATGTGATAATATAATGTGTTCCCCAATAAT AGTAAGTTCATCGAGTCAACGGAATAATGTCAGGGATCCCATTATTATCC CGTACACTTCACATGTTTTCTTCATGCGGAGACGACAAACCAAAGCTATA GCCTAGAGATTGGAATGTATAAGAAGAGGGGGTGCGGGAGGGAGATAAAT TCGTTGTTTGTTCGTTTGTTGTTTGTTCATTATTTTGTGATTATTATGAC TCGCCCACCATTCGCGACTACGAAGCGAATCCATCTGTCGTGATCATCCT GGTATTTCACTTCCCCCCCCCAAGAGAAACACGCCGGAAACAGCGCCATC TTGTCATTTGTTCTTACCCCCATCAGGAAAACGAACGCAAATCGTTTTGG CGCGGGGTATCCGAACATTATCTCGTGGTATGGAGACCTATTTCCGCGAG CGCGCTTGGCTTCCTTCGTCTCCCAATGTTTAATGTTATGACCCTTTTTT TTACAGGGGTCGCGGTGCTGGGTCTGGGAGCTCTCAACAAAGCGGAATTC ATTAACCACGGTGGAGAAGACCTCGTTAACGCCTTCGAACCACAGAAAAC CAGGCGAGGCCGGTTCGAGTCAGCAGAACTGATCGAGGACTAGTCGTGTG CAAGCATAAGATATAGGCACTTCCTTAGTAATAGTAGTGATAATAGCACC AGCGGTGTGGAGCAAAAGGTTGAGACGGAACGCTGCGTAACGATCGATTT TAGAATTCTGTTTCTCCTCCCTGTACAGTAATTATAATTAAAAGCTGATC TACGAATTAAATTTAGAATTTAAAAATAAAAGCAAAGCACGCGCCGTACC GAGCCCAGACCCATCCCTTACCCCTGAGCTCTTGAAAACGCCGCCGCCGC CGCCACAGGATCGTTCACGGAAACACTCTCACCGCAGCCGTCGTCGTGGA GAACGTGAAACAGGCCTTCGAGAGAGGTATTGATGTACCTGGTGATCCAG ATGTCACTGGTGACGTTGATGTCACTGGCTGTGGTGAAGTGAACACCACT GGTAATACGGCGGCGGCGTGGCCTCATCGTCATCGTCATCGAAGCGAGAG GCGCGAGGAGAAGACGGCGCTGCCGCCGCGGGTGTTCTTGACAGGCAGCA CCTCTAAGGTCCGGCTAGTGCCCGTTGAAGATTGAGGTGGGGGGGGAGGG CACTCATCAAGGGTATCTTCCCCTGCGATCACCGTAACTCTTGAACAGTA CACGAGTATTAACGACGAGGCCGCCTTTAGCAGCGAAAAACACACTCCAG TAGCCTTTTTGAATATCCATTTAGTGCTTTAAGAGAGAAGGGGGGGCTGG GCGAAGAGGGGTGAGAAAAATACGTCGCTCGGAAGCTGGCGTGTGTTTCG GGGCAGCGCTCGGTATCCTGCAGGATATTAATATAATTAATGCGTCTGTG TGTCTTTCCAATAAAGATTTGTACATTTTACATGATAAAATCATGTATCC ACGAATTACACCAAACTGCATCGTTGTCGCTGGTTCTGAGGCTATACACC AATAATACTCTACCTTGCCTCCCGTTTTTTCTTCTTTTCTTCCCTTTTGT TGTATAAATATGCACAATTCATGTGCATACATACATAAATATAAAAAAAA AGGTGGGGCGAGCGGTGGCCCTAAAGCTGGCCCTGGACGGCTACGACGTG GTGTGCTGCAGTTCTTCCGATGAGAGGTTCGCTTCCCTCCAATGGGAGCT GAGGGCGCTTCGCTCGCGCAGCGGCAAACGCGAGGGCACCGGACTCGCAC TTCAAGAGGGGTTTCCTGATGGAGGTGCCTTTTCCGGGTACAGCGACGGT GGCGTCGAGACGAAGGACGCGGGGACGCTTCTCCGCGCAAGGCGGGTGGA CGAGGGGGTGCGCCACCGTCTCTGGGTGATCGGAAAGTACGACACTTCCG TTCGGTGAGGTCGGGGTGTGATTTCCCTTGCTTTGCTTTATTTGCTTGCT GCGTGGTTCAAATGCAATCACGTGATACCATGCATTGAATCAAGCGCGCT TTTTGGTGAGGTGGAGATAAACCTCGCGCGAGATACGCATTCTGCCCAAG CTTCTCTGAGGTTTCGAGCGTTTCAACGCAGCGTTTTTGACGAACGGTGT ATTTTTTTCTAAGAAAACGTAGAGACGTGTTCTATTTCACCCTCTTTTTG TTTATGCGTGTGTATGTGTATGTGTGTGTGTATGTGTGACGTAACGGGTT TCAAATCATTTCCACGACGCCCCCAAAGTCACAAAAAACGCTTTTCTCTG GTTCCAATAATCCATCCCTCCAAAGTCATGTCGCTGCCATATCATAATCC GTTGATTTCTCCTGCCTTTTCTGTCGAAAGAGCAGTGTCAGTTCCGGGAT TTTTTTTGTCCAGTTTGCGAAGTTCGCCTCGCGCGCCCAACGAAATCCCA CCGGTAGTATAAAAACATACGTCTACAAATATAAAGATATATGAAAGAGA AAGTTGACAACATCGTTGCCGAAGCCGGTCCAGCTTCACAGGTTCCTCGT GAGTCGCGAACGATCGATTCGTGGGCACTCTCGATCTCTTAACGTACAAT ACCTCTTACAGTTCGAGTATGATAGAATGACATTATTATAAGATACGTGG GTACGGTCACAACAAAAAGTATCGTTCCACGATTCTGGGTGCCGCCGTGC TCATTAATCCCGTCTCCCCTTCTAACAATGCCTCTCTGGCCTCGTCAGGC TCCACGTTCCACTTGGGGCGTCGGCGGTAGTGTTCGCTGTGCCCTGCCCT CTGGAGGGCTACCGCAGCGACGTGTCTGTCGTCACTGGGGGCATACTGCG GATGGATGCTTCTCTGTGCTCTCCTCGACGGTTTCACTTTTTGTTACCGT TCGACCAGGTGGGTTTGGTAATATTTTGGGTGCGTGAGCGCGGCCATTGA ACGCCTTCGTTTAATGGTGTAATTCGAAAGTGTTTGCGTGTCACAGGTGG TGATAACCACAGCAAACAGCAAGGTGTGGCGATTTCCCCCCGGGACATGA GGCGATAGACCCGACCCAATTAACCAAAAACATCTCCCTCAACAGATCAT AAAATAGGGCGTTGTGTAGATCCGCACAGCGATGCTCAGCGATGTAAAGC GTTTGAGGCGACTGCGGATACTCCAAACCGATATACCAAGGACCTTTACC CCTTCCCCCAGAGTACGCGGCGCGGTGATTCAAAAGCATTTCCAATTAGG TAGAGGAGCCAGCGCGGACCTCATTGGGTACTCCGTAGTATGCCCATTTT GTTGCCCCCATCCTAAAGATAGTATGCCTATTCTGTTCAAAGTGAACGCT GCGCACATATTTTCTCTACAAACCTGGCGGCTGCTGCTACTGTACTGCTA TTGCTCTTACACTTTGCTTTTCATTCCTACCTTTCTTCCCTTTTTCGACC CTTCCCTCCATAGCTGTACGCCTGTCACGCGGCCGCCATTGTCCATTACC GCATGGGCTGGAGGCACCACGAGGTCGGAAAGGTGGACGTCTCCAGGATG GAGCCAACCCTCCAAGCGGCTCATGACTGCGGTTTCCACATT
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Coding sequence (CDS) from alignment at H-elongata_contig12105:851..6392-

>mRNA_H-elongata_contig12105.1617.1 ID=mRNA_H-elongata_contig12105.1617.1|Name=mRNA_H-elongata_contig12105.1617.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2076bp|location=Sequence derived from alignment at H-elongata_contig12105:851..6392- (Himanthalia elongata Himel1 dioecious)
CGTTTCAAATATAAGGGGACCTTTAACGAGCGTTTCAAATATAAGGGGAC
CTTTAACGAGGTGTGGACCCTCCGAGCCTTCGGCTACCAGTACATGATGA
GCGCTCTGAGAGGAAGGATCGCCCGAGGCATCGAGACGATCGTTCGAGAA
GCCGACAAAAACGGTGTGGACCCTCCGAGCCTTCGGCTACCAGTACATGA
TGAGCGCTCTGAGAGGAAGGATCGCCCGAGGCATCGAGACGATCGTTCGA
GAAGCCGACAAAAACGGGGTCGCGGTGCTGGGTCTGGGAGCTCTCAACAA
AGCGGAATTCATTAACCACGGTGGAGAAGACCTCGTTAACGCCTTCGAAC
CACAGAAAACCAGGGGTCGCGGTGCTGGGTCTGGGAGCTCTCAACAAAGC
GGAATTCATTAACCACGGTGGAGAAGACCTCGTTAACGCCTTCGAACCAC
AGAAAACCAGGATCGTTCACGGAAACACTCTCACCGCAGCCGTCGTCGTG
GAGAACGTGAAACAGGCCTTCGAGAGAGGTATTGATGTACCTGGTGATCC
AGATGTCACTGGTGACGTTGATGTCACTGGCTGTGGTGAAGTGAACACCA
CTGGTAATACGGCGGCGGCGATCGTTCACGGAAACACTCTCACCGCAGCC
GTCGTCGTGGAGAACGTGAAACAGGCCTTCGAGAGAGGTATTGATGTACC
TGGTGATCCAGATGTCACTGGTGACGTTGATGTCACTGGCTGTGGTGAAG
TGAACACCACTGGTAATACGGCGGCGGCGCGCGAGGAGAAGACGGCGCTG
CCGCCGCGGGTGTTCTTGACAGGCAGCACCTCTAAGGCGCGAGGAGAAGA
CGGCGCTGCCGCCGCGGGTGTTCTTGACAGGCAGCACCTCTAAGGTGGGG
CGAGCGGTGGCCCTAAAGCTGGCCCTGGACGGCTACGACGTGGTGTGCTG
CAGTTCTTCCGATGAGAGGTTCGCTTCCCTCCAATGGGAGCTGAGGGCGC
TTCGCTCGCGCAGCGGCAAACGCGAGGGCACCGGACTCGCACTTCAAGAG
GGGTTTCCTGATGGAGGTGCCTTTTCCGGGTACAGCGACGGTGGCGTCGA
GACGAAGGACGCGGGGACGCTTCTCCGCGCAAGGCGGGTGGACGAGGGGG
TGCGCCACCGTCTCTGGGTGATCGGAAAGTACGACACTTCCGTTCGGTGG
GGCGAGCGGTGGCCCTAAAGCTGGCCCTGGACGGCTACGACGTGGTGTGC
TGCAGTTCTTCCGATGAGAGGTTCGCTTCCCTCCAATGGGAGCTGAGGGC
GCTTCGCTCGCGCAGCGGCAAACGCGAGGGCACCGGACTCGCACTTCAAG
AGGGGTTTCCTGATGGAGGTGCCTTTTCCGGGTACAGCGACGGTGGCGTC
GAGACGAAGGACGCGGGGACGCTTCTCCGCGCAAGGCGGGTGGACGAGGG
GGTGCGCCACCGTCTCTGGGTGATCGGAAAGTACGACACTTCCGTTCGGC
TCCACGTTCCACTTGGGGCGTCGGCGGTAGTGTTCGCTGTGCCCTGCCCT
CTGGAGGGCTACCGCAGCGACGTGTCTGTCGTCACTGGGGGCATACTGCG
GATGGATGCTTCTCTGTGCTCTCCTCGACGGTTTCACTTTTTGTTACCGT
TCGACCAGGCTCCACGTTCCACTTGGGGCGTCGGCGGTAGTGTTCGCTGT
GCCCTGCCCTCTGGAGGGCTACCGCAGCGACGTGTCTGTCGTCACTGGGG
GCATACTGCGGATGGATGCTTCTCTGTGCTCTCCTCGACGGTTTCACTTT
TTGTTACCGTTCGACCAGCTGTACGCCTGTCACGCGGCCGCCATTGTCCA
TTACCGCATGGGCTGGAGGCACCACGAGGTCGGAAAGGTGGACGTCTCCA
GGATGGAGCCAACCCTCCAAGCGGCTCATGACTGCGGTTTCCACATTCTG
TACGCCTGTCACGCGGCCGCCATTGTCCATTACCGCATGGGCTGGAGGCA
CCACGAGGTCGGAAAGGTGGACGTCTCCAGGATGGAGCCAACCCTCCAAG
CGGCTCATGACTGCGGTTTCCACATT
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