mRNA_H-elongata_contig120969.1611.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: D7G0M2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M2_ECTSI) HSP 1 Score: 143 bits (360), Expect = 5.520e-42 Identity = 63/82 (76.83%), Postives = 74/82 (90.24%), Query Frame = 1
Query: 4 MRDAYAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFGEPPRQ 249
M++A+++QLAN DYQRF++KVPRVEGVWDDHDYGVNDAGK LSDH GRV+ FLDFLGVG DDPRRGG TLY+SH FGE P++
Sbjct: 79 MKEAFSKQLANEDYQRFLAKVPRVEGVWDDHDYGVNDAGKELSDHPGRVSAFLDFLGVGDDDPRRGGSTLYSSHTFGEAPKK 160
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: A0A6H5JL56_9PHAE (PhoD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL56_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.500e-39 Identity = 64/82 (78.05%), Postives = 74/82 (90.24%), Query Frame = 1
Query: 4 MRDAYAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFGEPPRQ 249
MR+A+++QLAN DYQRF++KVPRVEGVWDDHDYGVNDAGK LSDH GRV+ FLDFLGVG DDPRRGG TLY+SH FGE P++
Sbjct: 79 MREAFSKQLANEDYQRFLAKVPRVEGVWDDHDYGVNDAGKELSDHPGRVSAFLDFLGVGDDDPRRGGSTLYSSHTFGEAPKK 160
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: A0A7S2USL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USL7_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.890e-18 Identity = 41/82 (50.00%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 4 MRDAYAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFGEPPRQ 249
M++A+ N Y F+ + V+GVWDDHDYGVNDAGK L+ R +FLDFL V PRR LY+SH FG PP Q
Sbjct: 58 MKEAFDMIKGNTFYDEFLKEGTFVDGVWDDHDYGVNDAGKGLNHPMERQGIFLDFLDVEKGSPRRSRNGLYSSHTFGSPPTQ 139
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: L1JL70_GUITC (PhoD domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JL70_GUITC) HSP 1 Score: 84.0 bits (206), Expect = 1.040e-17 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 4 MRDAYAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFG 234
++ AY QL DY++F+S VEGV+DDHDYG NDAGK+L D G FLDF+GV RR + LY+SH FG
Sbjct: 17 LKTAYRSQLEREDYRQFLSTGVIVEGVYDDHDYGKNDAGKFLRDREGSQQAFLDFIGVDRHSARRRRQGLYSSHNFG 93
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: A0A7S4PJN4_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PJN4_GUITH) HSP 1 Score: 84.0 bits (206), Expect = 2.710e-17 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 4 MRDAYAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFG 234
++ AY QL DY++F+S VEGV+DDHDYG NDAGK+L D G FLDF+GV RR + LY+SH FG
Sbjct: 85 LKTAYRSQLEREDYRQFLSTGVIVEGVYDDHDYGKNDAGKFLRDREGSQQAFLDFIGVDRHSARRRRQGLYSSHNFG 161
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: UPI001BBE1AE2 (Alkaline phosphatase family protein n=1 Tax=Algoriphagus sp. TaxID=1872435 RepID=UPI001BBE1AE2) HSP 1 Score: 78.6 bits (192), Expect = 2.150e-15 Identity = 38/78 (48.72%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 4 MRDAYAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFGE 237
+R YA Q AN DYQ S P + G+WDDHDYG+ND GK+ + + +FLGV A P R E YASH FGE
Sbjct: 78 LRAKYARQNANPDYQALKSSTPII-GIWDDHDYGINDGGKYFAQKKESRDLMFEFLGVPAGAPERSREGAYASHTFGE 154
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: A0A7S0F2T0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F2T0_9CRYP) HSP 1 Score: 74.3 bits (181), Expect = 2.300e-15 Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 40 DYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFG 234
DY+ F+S VEGV+DDHDYG NDAGK+L + G +LDFLGV D RR LY+SH FG
Sbjct: 2 DYRGFLSTGVIVEGVYDDHDYGQNDAGKYLKNRDGSQQAYLDFLGVDRDSLRRRRRGLYSSHNFG 66
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: H3HAW9_PHYRM (PhoD domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAW9_PHYRM) HSP 1 Score: 77.4 bits (189), Expect = 9.420e-15 Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 16 YAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFG 234
Y + LAN DY F+S+ P V G+WDDHDYG+ND GK + VFLDF+G D PRR E +Y S+ G
Sbjct: 412 YGKLLANDDYTAFVSRTP-VIGIWDDHDYGINDGGKHFTYREQSQQVFLDFMGEPEDSPRRKQEGIYTSYTIG 483
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: A0A329SW15_9STRA (PhoD domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A329SW15_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.200e-14 Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 16 YAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFG 234
Y + +AN DY F+++ P + G+WDDHDYG+ND GK+ ++ +FLDF+G D PRR E +Y S+ G
Sbjct: 109 YNKLMANEDYAAFVNRTPII-GIWDDHDYGINDGGKFYTNREESQQIFLDFIGEPKDSPRREQEGIYTSYTIG 180
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Match: A0A7V7X4X6_9BACT (Alkaline phosphatase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V7X4X6_9BACT) HSP 1 Score: 76.3 bits (186), Expect = 1.530e-14 Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 16 YAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAVFLDFLGVGADDPRRGGETLYASHVFG 234
Y Q AN DYQ+ + +P V G+WDDHDYG N A + S +FLDFL V AD PRR E +YAS++FG
Sbjct: 84 YQLQKANPDYQKLVETIP-VIGIWDDHDYGKNGANRTYSQKRESQRLFLDFLDVPADSPRRSQEGVYASYLFG 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120969.1611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig120969.1611.1 >prot_H-elongata_contig120969.1611.1 ID=prot_H-elongata_contig120969.1611.1|Name=mRNA_H-elongata_contig120969.1611.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp MRDAYAEQLANRDYQRFISKVPRVEGVWDDHDYGVNDAGKWLSDHAGRVAback to top mRNA from alignment at H-elongata_contig120969:124..372+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig120969.1611.1 ID=mRNA_H-elongata_contig120969.1611.1|Name=mRNA_H-elongata_contig120969.1611.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=249bp|location=Sequence derived from alignment at H-elongata_contig120969:124..372+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig120969:124..372+ >mRNA_H-elongata_contig120969.1611.1 ID=mRNA_H-elongata_contig120969.1611.1|Name=mRNA_H-elongata_contig120969.1611.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=492bp|location=Sequence derived from alignment at H-elongata_contig120969:124..372+ (Himanthalia elongata Himel1 dioecious)back to top |