mRNA_H-elongata_contig120911.1605.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: D8LEX9_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX9_ECTSI) HSP 1 Score: 214 bits (544), Expect = 6.520e-68 Identity = 104/144 (72.22%), Postives = 116/144 (80.56%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGTWYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
PSVLFPV+F LNLVA HY+TVNTIPFMA+ +M IW+FVSFPL V GSMFGRHWGGK NFPCRVNSIPR IPE WY +P+ V+P AG+LPFGSIFIEMYFILTSLW YYYV+GF+LL +CTTIVAVY VLN E
Sbjct: 9 PSVLFPVVFLLNLVAMHYNTVNTIPFMAVLKMALIWVFVSFPLCVAGSMFGRHWGGKGNFPCRVNSIPRPIPESVWYLQPNVVVPLAGILPFGSIFIEMYFILTSLWANMYYYVYGFVLLVFAILVVVLVCTTIVAVYFVLNGE 152
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: A0A6H5KXN7_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN7_9PHAE) HSP 1 Score: 216 bits (550), Expect = 1.290e-64 Identity = 103/144 (71.53%), Postives = 118/144 (81.94%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGTWYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
PS+LFPV+F LNLVA HY+TVNTIPFMA+F+M IW+FVSFPL V GSMFGRHWGGK NFPCRVNSIPR IPE WY++P+ V+P AG+LPFGSIFIEMYFIL SLW Y YYYV+GF+LL +CT+IVAVY VLN E
Sbjct: 388 PSILFPVVFVLNLVAMHYNTVNTIPFMAVFKMALIWVFVSFPLCVAGSMFGRHWGGKGNFPCRVNSIPRPIPESVWYSQPNVVVPLAGILPFGSIFIEMYFILASLWAYKYYYVYGFVLLVFAILVVVLVCTSIVAVYFVLNGE 531
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: A0A835YQT7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT7_9STRA) HSP 1 Score: 198 bits (504), Expect = 6.040e-58 Identity = 95/144 (65.97%), Postives = 111/144 (77.08%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGTWYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
P+++ V+ FLN VA +YDT+NTIPFM + +M IWLFV+FPL VVG MFGRHWGGKA+FPCRVNSI R IP G WYT+P+ VIP G+LPFGSIFIEMYFI TS W Y +YYV+GFMLL +C TIVAVY VLNAE
Sbjct: 378 PALVITVLSFLNTVAVYYDTINTIPFMVIVKMALIWLFVAFPLAVVGCMFGRHWGGKASFPCRVNSIARPIPPGPWYTRPAAVIPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYAILSVVLVCATIVAVYFVLNAE 521
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: A0A7S4DBZ3_HETAK (Transmembrane 9 superfamily member n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBZ3_HETAK) HSP 1 Score: 184 bits (468), Expect = 6.700e-54 Identity = 87/134 (64.93%), Postives = 101/134 (75.37%), Query Frame = 1
Query: 31 LNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGTWYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
LN VAA+YDT NTIPF + +MF IW+FVSFPL V G+MFGRHWGG+A+FPCRVN+ PR IP G WYTKP IP G+LPFGSIFIEMYF+ TS W Y +YYV+GFMLL +CT +VA Y VLNAE
Sbjct: 237 LNAVAAYYDTTNTIPFGVILKMFAIWVFVSFPLAVSGTMFGRHWGGRADFPCRVNTFPRPIPLGKWYTKPWVFIPLTGILPFGSIFIEMYFVFTSFWNYKFYYVYGFMLLVYMILAVVTMCTAVVATYFVLNAE 370
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: A0A7R9U3Y7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Y7_9STRA) HSP 1 Score: 177 bits (449), Expect = 7.310e-51 Identity = 88/146 (60.27%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGT-WYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYT-YYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
P V+ V+ FLN++A Y T N + F + +F IW+F+SFPL V+G++FGRHWGGK FPCRVN+ PR +PE T WY K FVIPA GLLPFGSIFIEMYFI TS W Y +YYV+GFMLL ICTT+VAVY VLNAE
Sbjct: 250 PGVIVGVVSFLNIIAMSYSTSNVLSFTVVANLFLIWIFISFPLAVIGTLFGRHWGGKNTFPCRVNTYPRDLPEATPWYAKWYFVIPATGLLPFGSIFIEMYFIFTSFWNYNKFYYVYGFMLLVYLILMVVTICTTVVAVYFVLNAE 395
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: A0A482RX49_9ARCH (Transmembrane 9 family protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX49_9ARCH) HSP 1 Score: 162 bits (409), Expect = 4.320e-47 Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGTWYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
P+++ V LN++A YDT++ IP +M IW FV+ PL V G+MFGRHWGGK + PCRVNSIPR IP WY+ P FV AG+LPFGSIFIEMYFI T+ W Y +YYV+GF+LL IC+TIVAVY LN E
Sbjct: 71 PALITAVCLLLNVIAHSYDTLSAIPLSVAVKMAAIWSFVALPLAVAGTMFGRHWGGKYDPPCRVNSIPRPIPYANWYSSPLFVALLAGILPFGSIFIEMYFIFTAFWSYKFYYVYGFVLLVYAILALVTICSTIVAVYFTLNNE 214
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: W7TF26_9STRA (Transmembrane 9 superfamily member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF26_9STRA) HSP 1 Score: 169 bits (429), Expect = 4.740e-47 Identity = 80/144 (55.56%), Postives = 103/144 (71.53%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGTWYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
P ++ V+F LN++A +YDT + + +F++F IWLFVS PL VVG++FGRHW GKA+FPCR+NS+ R IP G WYT P+ + G+LPFGSIFIEMYFI TS W Y +YYV+ F+LL ICTTIVAVY +LN E
Sbjct: 379 PVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVE 522
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: A0A6U4JKR6_9STRA (Transmembrane 9 superfamily member n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JKR6_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.900e-46 Identity = 79/145 (54.48%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGT-WYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
P ++ ++ LN+VA +Y T N + F + ++ IW+F+SFPL V+G++FGRHWGGK FPCRVN+ PR +PE W+ + FVIPA GLLPFGSIFIEMYFI TS W Y +YYV+G ML+ +CTT+VAVY VLNAE
Sbjct: 403 PCIIVGIVSCLNMVAMYYQTSNVLSFTVLLKLMGIWMFISFPLAVLGTLFGRHWGGKNTFPCRVNTYPRDLPEAAPWFAQWYFVIPATGLLPFGSIFIEMYFIFTSFWNYKFYYVYGLMLVVYLILTVVTVCTTVVAVYFVLNAE 547
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: A0A6U5J731_9STRA (Transmembrane 9 superfamily member n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5J731_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.390e-45 Identity = 77/144 (53.47%), Postives = 101/144 (70.14%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGTWYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
P+V VM LN +A +Y T N IPFM + + F IW+F+S PL VVG++ GRH G K FPCRVNSIPR IP+ WY +P F++P AGLLPFGSIFIE+Y+++TS+W Y +Y+V+GFML T+I++VY LNAE
Sbjct: 140 PTVAASVMSILNCIALYYGTANVIPFMVILKCFAIWIFLSIPLTVVGTLLGRHSGKKTIFPCRVNSIPRSIPDAPWYGQPLFLVPLAGLLPFGSIFIELYYVMTSVWNYKFYHVYGFMLGVFGIMTIVVSMTSIISVYFCLNAE 283
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Match: A0A7S1FXG2_9STRA (Transmembrane 9 superfamily member n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FXG2_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.660e-43 Identity = 77/144 (53.47%), Postives = 101/144 (70.14%), Query Frame = 1
Query: 1 PSVLFPVMFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKANFPCRVNSIPRQIPEGTWYTKPSFVIPAAGLLPFGSIFIEMYFILTSLWGYTYYYVFGFMLLXXXXXXXXXICTTIVAVYTVLNAE 432
P+V VM LN +A +Y T N IPFM + + F IW+F+S PL VVG++ GRH G K FPCRVNSIPR IP+ WY +P F++P AGLLPFGSIFIE+Y+++TS+W Y +Y+V+GFML T+I++VY LNAE
Sbjct: 382 PTVAASVMSILNCIALYYGTANVIPFMVILKCFAIWIFLSIPLTVVGTLLGRHSGKKTIFPCRVNSIPRSIPDAPWYGQPLFLVPLAGLLPFGSIFIELYYVMTSVWNYKFYHVYGFMLGVFGIMTIVVSMTSIISVYFCLNAE 525 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120911.1605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig120911.1605.1 >prot_H-elongata_contig120911.1605.1 ID=prot_H-elongata_contig120911.1605.1|Name=mRNA_H-elongata_contig120911.1605.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp MFFLNLVAAHYDTVNTIPFMAMFRMFFIWLFVSFPLGVVGSMFGRHWGGKback to top mRNA from alignment at H-elongata_contig120911:3..1965+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig120911.1605.1 ID=mRNA_H-elongata_contig120911.1605.1|Name=mRNA_H-elongata_contig120911.1605.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1963bp|location=Sequence derived from alignment at H-elongata_contig120911:3..1965+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig120911:3..1965+ >mRNA_H-elongata_contig120911.1605.1 ID=mRNA_H-elongata_contig120911.1605.1|Name=mRNA_H-elongata_contig120911.1605.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=822bp|location=Sequence derived from alignment at H-elongata_contig120911:3..1965+ (Himanthalia elongata Himel1 dioecious)back to top |