mRNA_H-elongata_contig12091.1603.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: D8LBG5_ECTSI (Spermidine/spermine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG5_ECTSI) HSP 1 Score: 779 bits (2011), Expect = 4.780e-271 Identity = 393/550 (71.45%), Postives = 454/550 (82.55%), Query Frame = 3
Query: 996 RVQVLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAFPMVRALQCFTGIYPGGIWNIQIATLGDDPQEVDFDRAEALCRRNRLLFYSPQAHYAAFVLPPVALRELAKPPPKLRDTIADLEEIMAFGEGSTST-GSEAGVFSKRWEPDVRRSLSRLVMGASSDANVPLAVFDADGTLWDGDAAEYFMHWMKTSNQWTHHDDFVERYQSIMRDGDKRGACGFVAQLFEGMEVTEAQLLAEENFRLNVEHLFVPEMKELIKTLRSRGWRVVIVTASPKWIVEPATRRLGLRVDDVLGIEVEVSRGKATSALRLPLPVCEGKVDALKMEF-SERPTLAVGSSMDDSAMLSYARGVALVSNPSCSELESLARKNGWSVHHLN*DRRMTNIA 2639
RVQVL+T AMGRMLVLD+ALQCAERDEAGYHE+I H ALCR+ +GS G RALIIGGGDGGAAREILRH+D+A VDLVDID EVMAASK+FIP IWRHPTS+++ YV LD D RLTVRAEDGLAFL DDSREGYD+IVVDASDP+GPGAALYSDEFYA+LRRRL+P GAVAVQGGSFWYLPLVFRTV+HGLKKAFP VRALQCFT IYPGG+WNIQ+ATLGDDPQ+VD ++A LC ++L FYSPQ H+AAF LPPVAL+ELAKP PKL +T ADLE IMA+GE + T G+ A + WEPDVRRSLSRLV GA+ D +VPLA FDADGTLWDGD+AE F+ WM TSN+W+ H+DFV RY +++ GDK+GA G VAQLF+GM V+E L EE F+ NVE L + EM EL++ LR+RGWRV+IVTASP WIVEP RRLGL +DVLGIEVEVS+GKATSALR PLPV EGKV+AL+M F S RPTLAVG+S+DD AML YARG ALVSNP+ +ELESLAR +GW +H L + +A
Sbjct: 70 RVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKG---AAAGS---GKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDIIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFALPPVALQELAKPRPKLSETQADLESIMAYGEENEDTKGTPAHICDSCWEPDVRRSLSRLVSGAT-DKDVPLAAFDADGTLWDGDSAEIFLEWMDTSNRWSQHEDFVARYYALLASGDKKGAYGLVAQLFDGMLVSEISKLCEECFQENVEDLVISEMAELVQDLRARGWRVIIVTASPTWIVEPGARRLGLGPEDVLGIEVEVSQGKATSALRHPLPVQEGKVEALQMAFNSTRPTLAVGNSLDDGAMLGYARGFALVSNPNSAELESLARDSGWGIHRLEVESATLEVA 612
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: A0A7S2UVX5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVX5_9STRA) HSP 1 Score: 289 bits (740), Expect = 7.360e-87 Identity = 143/242 (59.09%), Postives = 175/242 (72.31%), Query Frame = 3
Query: 1164 RALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAFPMVRALQCFTGIYPGGIWNIQIATLGDDPQEVDFDRAEALCRRNRLLFYSPQAHYAAFVLPPVALRELAKPPPKLRDTIADLEEIMAFGEGSTSTGS 1889
R L++GGGDGG+ARE LRH D+ VD VDID EV+ AS+E +PSIWRHP ST + ++L++D RL +R DG FL D EGYDLIVVDASDP+GPG+ALY+D FYA+LR RLRPGGAV+VQGGSFWYLP VFRTVYHGLK +FP+V+ QCFT +YPGGIWN+Q+ATLGDDP EVD ++ A+ L +Y+ H AAF LPP+A L PP A + A +GS GS
Sbjct: 1 RVLVVGGGDGGSAREALRHPDVGHVDFVDIDAEVLRASRELLPSIWRHPHSTADQPLALEDDPRLNIRVMDGFEFLKDAEGEGYDLIVVDASDPVGPGSALYTDSFYASLRARLRPGGAVSVQGGSFWYLPAVFRTVYHGLKSSFPVVKPYQCFTSVYPGGIWNLQVATLGDDPAEVDPEKVSAITGAP-LEWYTAHTHAAAFHLPPIAYAALEIPP-------AGMSAAGADSDGSFDHGS 234
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: A0A3M1TKL5_9DELT (Polyamine aminopropyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1TKL5_9DELT) HSP 1 Score: 255 bits (652), Expect = 7.040e-74 Identity = 136/263 (51.71%), Postives = 168/263 (63.88%), Query Frame = 3
Query: 996 RVQVLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAFPMVRALQCFTGIYPGGIWNIQIATLGDDPQEVDFDRAEAL--CRRNRLLFYSPQAHYAAFVL 1778
R++VL+T + GRM+VLD A+Q AE DEA YHE + H LCRR G+ G R L+IGGGDGGAARE LRH + VDLVDIDP V A+++F P++W P + LD+D R + EDGL FL S E YDLIVVD++DP+GPG L+S+ FYA + RPGGA AVQGGSFWYLP V GL AF C++ +YPGG+WN+ +AT GDDP EVD +RA AL CR FYS + H A F L
Sbjct: 47 RLRVLETESHGRMMVLDEAVQVAESDEACYHELLVHPGLCRR-------GASQGPKRVLVIGGGDGGAAREALRHPGVTHVDLVDIDPAVTRAARDFFPTLWVRPDGSGP----LDDDPRFHLHHEDGLTFLKGQS-EPYDLIVVDSTDPVGPGEVLFSNAFYALVAEHTRPGGAAAVQGGSFWYLPEVLERATTGLAAAFGRAEPYVCWSDVYPGGLWNLVLATFGDDPAEVDRERAGALTGCR-----FYSAEVHPALFAL 292
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: A0A7S3NLF0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLF0_9STRA) HSP 1 Score: 236 bits (602), Expect = 8.990e-66 Identity = 130/296 (43.92%), Postives = 182/296 (61.49%), Query Frame = 3
Query: 996 RVQVLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAFPMVRALQCFTGIYPGGIWNIQIATL--GDDPQEVDFDRAEALC--RRNRLLFYSPQAHYAAF-VLPPVALRELAKPPPKLRDTIADLEEIMAFGE 1868
++ ++ T ++GR L+LD ALQCAE+DEAGYHE + HV + R + +S LIIGGGDGG AREIL++ +D+V+ID V+ ++F+P ++ S+ +D+R + ED F+ + YDLI++DASDPIGPGA+LY+ FYA ++R LR GAV Q GSF+YLP VFRTVYHGL FP+V CFT +YPGG WN+ IATL D P++ R ++ +L FY H AAF +PP+A ELAK PP +++ A+ +I +GE
Sbjct: 92 QISIVDTVSLGRALILDGALQCAEKDEAGYHEMMTHVPMLRH-KAGKISD-------ILIIGGGDGGIAREILKYKYFERLDMVEIDQVVVDTCQKFLPRVFP---------ASIAQDDRFHLFYEDAATFVTSAESQSYDLIIIDASDPIGPGASLYTPTFYAEIKRLLRREGAVVAQCGSFFYLPCVFRTVYHGLSAHFPVVMPYSCFTAVYPGGSWNLAIATLRPSDRPEKPHSRRIRGFLADQQEQLSFYDSAVHRAAFDSIPPLARNELAKGPPSIQELQAEFVDI--YGE 368
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: UPI00168A0993 (polyamine aminopropyltransferase n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI00168A0993) HSP 1 Score: 176 bits (447), Expect = 1.590e-45 Identity = 104/277 (37.55%), Postives = 150/277 (54.15%), Query Frame = 3
Query: 996 RVQVLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSI---WRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAFPMVRALQCFTGI--YPGGIWNIQIATLGD-DPQEVDFDRAEALCRRNRLLFYSPQAHYAAFVLPPVALRELAK 1808
RV++++T+ G+ L +D+ + C E+DEA YHE IAH A+ V L+IGGGDGG REIL+H +I V +V+ID V+ A K +P++ + HP +L ++ DGL F+AD + E YDLI++D SDP+GP L+S EFY +R L+P G + Q S + VF + LKK F R I YP GIW+ Q+A+ G DP++V + A R N L +Y+ + H AAF LP + LA+
Sbjct: 54 RVRIIETYGYGKTLTIDNMVMCTEKDEAHYHETIAHPAILAHGAVKDV----------LVIGGGDGGTVREILKHPEIERVVMVEIDANVIEACKLHLPTLSQSFSHP--------------KLDLQVGDGLKFIADAAAESYDLIIIDGSDPVGPAEGLFSAEFYRNCQRALKPNGLLVTQAESPAFHQTVFAELNACLKKIFGADRVYVLLFQIPTYPSGIWSFQLASNGAIDPRKVSSESVAAFERENNLQYYNAEIHQAAFALPNYVKKMLAE 306
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: A0A7C6T0M1_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6T0M1_9FIRM) HSP 1 Score: 175 bits (443), Expect = 2.180e-45 Identity = 105/266 (39.47%), Postives = 144/266 (54.14%), Query Frame = 3
Query: 1005 VLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAFPMVRALQCFTGIYPGGIWNIQIATLGDDPQEVDFDRAEALCRRNRLLFYSPQAHYAAFVLPPVALREL 1802
+ T A+GR+LVLD +Q E DE YHE I HV L V LI+GGGDGG+ RE+L+H + LVDID V+ ASK F+P W S D R V +GL F+A ++E YD+++VD++DPIGPG AL+ +EFY +++ LRPGG ++ Q + ++P + RTV+ + FP+ + YPGG W ATLG DP E + L R +YSP+ H AFVLPP R +
Sbjct: 35 IYDTEALGRILVLDDVIQTTEIDEHIYHECIVHVPLLAHPNPEEV----------LIVGGGDGGSLREVLKHPSVKRATLVDIDEGVIEASKRFLPQ-WNTGWS----------DPRARVVIANGLDFVAK-AKEEYDVVIVDSTDPIGPGEALFREEFYRSIKGALRPGGVMSAQTENPIFMPDLVRTVFGRVANVFPVAKLYTGPMPTYPGGFWCYTCATLGPDPSE-PVREPQGLAFR----YYSPEIHRRAFVLPPEVARSV 273
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: A0A7C6ZCN3_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6ZCN3_9FIRM) HSP 1 Score: 175 bits (443), Expect = 3.320e-45 Identity = 109/272 (40.07%), Postives = 144/272 (52.94%), Query Frame = 3
Query: 1005 VLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAFPMVRALQCFTGIYPGGIWNIQIATLGDDPQE------VDFDRAEALCRRNRLLFYSPQAHYAAFVLPPVALREL 1802
+ T GRMLVLD+ +Q E+DE YHE + HV + V LIIGGGDGG+ RE+LRH + +VDID EV+AA+KE +P+ W S A RL V EDG FLA SR YD+I+VD++DP+GP L+ +FY+ + L+PGG A Q S P + R VYH + FP+ + YPGG W+ IA G DP E VDF+ L +YSP+ H AFVLPP +++L
Sbjct: 35 IFDTVEFGRMLVLDNVIQTTEKDEYIYHESLVHVPMFFHPHPEKV----------LIIGGGDGGSLREVLRHKSVRQAFMVDIDGEVIAAAKEHLPA-WSSGFSDPRA--------RLVV--EDGREFLAR-SRSEYDVILVDSTDPVGPAEVLFQVDFYSLASKALKPGGCFAAQTESPIATPDLVRNVYHRIAACFPVAKIYTAPVPSYPGGWWSFTIAAFGGDPAEPSRKPDVDFEGV--------LKYYSPEIHRRAFVLPPKIVKDL 276
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: A0A7C6LJF4_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6LJF4_9FIRM) HSP 1 Score: 172 bits (437), Expect = 1.430e-44 Identity = 106/279 (37.99%), Postives = 149/279 (53.41%), Query Frame = 3
Query: 957 AADLKC*RYARPWRVQ---VLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAFPMVRALQCFTGIYPGGIWNIQIATLGDDPQEVDFDRAEALCRRNRLLFYSPQAHYAAFVLPP 1784
+A +K Y + + Q + T GRMLVLD+ +Q E+DE YHE + HV L V LIIGGGDGGA RE L+H + LVDID EV+ A+K ++PS W S D+R V EDGL ++A +R+ +D+++VD+SDP+GP AL+ EFY+++ + LRPGG + Q S P V R ++H + + FP+ R YPGG W+ +LG DP+ V + E L FYSP+ H F+L P
Sbjct: 16 SAQIKSVVYTKRTKFQELCIFDTVEFGRMLVLDNVIQTTEKDEYIYHESLVHVPLLSHPNPEKV----------LIIGGGDGGALRETLKHPQVKEATLVDIDGEVIEAAKTYLPS-WSSSFS----------DKRARVLVEDGLNYVAT-TRDRFDVVLVDSSDPVGPSEALFRPEFYSSIAKVLRPGGMMCAQTESPIATPAVVRDIFHRISRVFPVTRLYTAPVPSYPGGWWSFTCGSLGSDPK-VPVRKPEESWE---LKFYSPEIHERLFILNP 268
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: H1XQY3_9BACT (S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Caldithrix abyssi DSM 13497 TaxID=880073 RepID=H1XQY3_9BACT) HSP 1 Score: 177 bits (449), Expect = 1.560e-44 Identity = 105/265 (39.62%), Postives = 148/265 (55.85%), Query Frame = 3
Query: 999 VQVLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWYLPLVFRTVYHGLKKAF-PMVRALQCF-TGIYPGGIWNIQIATLGD-DPQEVDFDRAEALCRRNRLLFYSPQAHYAAFVLPP 1784
V+VL T+A G+ L LD+ + C E+DE YHE ++H + V L+IGGGDGG RE+LRH+ + V +V+ID +V+ A++ +P I V+ D D RL +R EDG+ F+AD YDLIVVD++DPIGP L+S+ FY R L GA+ VQG + + VF ++ LK F P + F YP G+W+ QI G +P E D +A CR ++L +YSP+ H A+FVLPP
Sbjct: 175 VKVLNTYAFGKTLTLDNMIMCTEKDEFHYHEMMSHPLMMAHGNVKNV----------LVIGGGDGGVVREVLRHDGVEKVTMVEIDGKVVEAARLHLPQIA----------VAFD-DPRLDLRIEDGIKFVADAPAGTYDLIVVDSTDPIGPAEGLFSETFYRNCHRILNDNGAMIVQGEAPRFNEQVFLDIHQTLKNIFGPKNAHIMLFHVPTYPTGVWSGQIGVKGSFNPAEFDEVKASEFCRAHQLKYYSPEIHKASFVLPP 418
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Match: A0A7C6NSV9_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6NSV9_9FIRM) HSP 1 Score: 172 bits (437), Expect = 1.600e-44 Identity = 98/260 (37.69%), Postives = 144/260 (55.38%), Query Frame = 3
Query: 1005 VLKTHAMGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALIIGGGDGGAAREILRHNDIATVDLVDIDPEVMAASKEFIPSIWRHPTSTDEAYVSLDEDERLTVRAEDGLAFLADDSREGYDLIVVDASDPIGPGAALYSDEFYAALRRRLRPGGAVAVQGGSFWY-LPLVFRTVYHGLKKAFPMVRALQCFTGIYPGGIWNIQIATLGDDPQEVDFDRAEALCRRNRLLFYSPQAHYAAFVLP 1781
V+ T GR L+LD A+Q DE YHE IAHV L V LIIGGGDGG RE L+H + V LV+IDP+V+A +KE++P I +S D R+ ++ DG+ ++AD E YD+I++D+SDP+GP L+ +EFYA + R L+ G + Q S W + ++ +Y G+K +FP+ R C+ YP G+W+ + + DP EVD + L R +Y+P+ H+A+F LP
Sbjct: 35 VVDTDRFGRTLILDGAVQTTVADEYVYHEMIAHVPLFTHPNPEKV----------LIIGGGDGGTVRETLKHKSVKEVHLVEIDPDVVAVAKEYLPEI--------SCGLS---DPRVIIQHTDGIKYVADHEDE-YDVIIIDSSDPVGPAVGLFREEFYADVNRALKDDGILVAQTESPWLNVDIMMPEIYQGIKASFPITRMYLCYIPTYPCGMWSFTLGSKKYDPLEVDPSQIIDLGYR----YYTPELHHASFALP 268 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12091.1603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12091.1603.1 >prot_H-elongata_contig12091.1603.1 ID=prot_H-elongata_contig12091.1603.1|Name=mRNA_H-elongata_contig12091.1603.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=531bp MGRMLVLDSALQCAERDEAGYHEFIAHVALCRRSRESTVSGSENGGNRALback to top mRNA from alignment at H-elongata_contig12091:1263..7206+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12091.1603.1 ID=mRNA_H-elongata_contig12091.1603.1|Name=mRNA_H-elongata_contig12091.1603.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5944bp|location=Sequence derived from alignment at H-elongata_contig12091:1263..7206+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12091:1263..7206+ >mRNA_H-elongata_contig12091.1603.1 ID=mRNA_H-elongata_contig12091.1603.1|Name=mRNA_H-elongata_contig12091.1603.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3186bp|location=Sequence derived from alignment at H-elongata_contig12091:1263..7206+ (Himanthalia elongata Himel1 dioecious)back to top |