mRNA_H-elongata_contig12058.1579.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12058.1579.1
Unique NamemRNA_H-elongata_contig12058.1579.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A6H5KD26_9PHAE (Nuclear transcription factor Y subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD26_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 2.030e-49
Identity = 90/98 (91.84%), Postives = 96/98 (97.96%), Query Frame = 2 
Query:  623 QYPIYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEGATAP 916
            QYP++SR+ALPTDQVTEDPPTYVNAKQYRRI+KRREARAKLEARRKVAPQRK+FLHKSRHDHA RRVRGPGGRFLTKAEL +YRKQLEAQDPEGATAP
Sbjct:   69 QYPLFSRVALPTDQVTEDPPTYVNAKQYRRIMKRREARAKLEARRKVAPQRKTFLHKSRHDHAMRRVRGPGGRFLTKAELEQYRKQLEAQDPEGATAP 166
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: D7FQ09_ECTSI (Nuclear transcription factor Y subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ09_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.300e-43
Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:  662 QVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEGATAPAKVAGPGK 940
            QVTEDPPTYVNAKQYRRI+KRREARAKLEARRKVAPQRK+FLHKSRHDHA RRVRGPGGRFLTKAEL +YRKQLEAQDPEGATAPA   G GK
Sbjct:   34 QVTEDPPTYVNAKQYRRIMKRREARAKLEARRKVAPQRKTFLHKSRHDHAMRRVRGPGGRFLTKAELDQYRKQLEAQDPEGATAPAPQPGSGK 126
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A7R9U4I3_9STRA (Nuclear transcription factor Y subunit n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4I3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.180e-24
Identity = 61/102 (59.80%), Postives = 78/102 (76.47%), Query Frame = 2 
Query:  572 AAIAQNPAAMMLMPYMAQYPIYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRK 877
            A + QN     L P  + YP+ S++ L   +++++ PTYVNAKQYRRI+KRR+ARAKLE++ K AP RK++LHKSRH+HACRR RGP GRFLTKAEL E RK
Sbjct:  126 AVVMQN----YLHPAQSMYPVASKVPL-NQEMSDEQPTYVNAKQYRRILKRRQARAKLESKWK-APSRKTYLHKSRHEHACRRPRGPSGRFLTKAELEELRK 221
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A835ZFN6_9STRA (Nuclear transcription factor Y subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.500e-24
Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 2 
Query:  572 AAIAQNPAAMMLMPYMAQYPIYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAEL 862
            A +   P  MML P M   P++ RM    +++ E+P TYVNAKQY+RI+KRREARAKLE RR++   RKSFLHKSRHDHACRR RGPGGRFLTKAEL
Sbjct:   58 AQMLSQPQMMMLSPLMFASPMF-RMPGAANELEENP-TYVNAKQYKRILKRREARAKLEERRRIPAARKSFLHKSRHDHACRRKRGPGGRFLTKAEL 152
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A433Q1P5_9FUNG (Transcriptional activator HAP2 n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q1P5_9FUNG)

HSP 1 Score: 106 bits (265), Expect = 3.750e-22
Identity = 65/120 (54.17%), Postives = 78/120 (65.00%), Query Frame = 2 
Query:  575 AIAQNPAAMMLMPYMAQY--PIYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQ----DPEGATAP 916
            A AQ    M L+P  AQ   P   R+ L  + VTED P YVNAKQY RI+KRR ARA+LE + KVA  RK +LH+SRH HA RR RGPGGRFLT AE+ E  KQ + +    D  G+T+P
Sbjct:  149 AYAQQYGQMPLIPGQAQVMNPALYRVPLSNEVVTEDEPLYVNAKQYHRILKRRAARARLEEQNKVAKTRKPYLHESRHKHAMRRPRGPGGRFLTAAEIAELDKQAKLEGKDGDENGSTSP 268
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A1V9ZVB7_9STRA (Nuclear transcription factor Y subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVB7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.760e-21
Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 2 
Query:  593 AAMMLMP--YMAQYPIYSRMALPTD-QVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQ 892
            + +MLMP  YM  +P++SRM LP   ++ E+ P YVNAKQY RI+ RR+ RAKLEA+     QRK+FLH SRH HA RR RGPGGRFLTK E+ +  ++  AQ
Sbjct:   42 SGLMLMPPTYMQSHPMFSRMPLPGGGEMVEEEPVYVNAKQYHRIMVRRQQRAKLEAKIGNTRQRKAFLHASRHKHAMRRPRGPGGRFLTKDEIAQLDREEAAQ 144
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A1Y1YW95_9FUNG (Transcriptional activator HAP2 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YW95_9FUNG)

HSP 1 Score: 95.5 bits (236), Expect = 2.270e-20
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 2 
Query:  641 RMALPTDQVT--EDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPE 901
            R+ LP + VT  ED P YVNAKQY RI+KRR ARAKLE + ++   RK +LH+SRH HA RR RGPGGRFLT AE+ E  K+ E +  E
Sbjct:    3 RVPLPNEVVTAGEDDPLYVNAKQYHRILKRRAARAKLEEKHRIQKSRKPYLHESRHRHAMRRPRGPGGRFLTAAEIAELDKKKENESDE 91
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A075AQC5_ROZAC (Transcriptional activator HAP2 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AQC5_ROZAC)

HSP 1 Score: 96.3 bits (238), Expect = 2.720e-20
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 2 
Query:  641 RMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEG 904
            R+ALP   V E+ P YVNAKQY+RI+KRR ARAK EA RK + ++K +LH+SRH HA RR+RGPGGRFLT AE+ E +K+ + Q   G
Sbjct:   15 RVALPAT-VVEEEPMYVNAKQYQRILKRRIARAKYEAARKKSMEKKPYLHESRHKHAMRRLRGPGGRFLTAAEIAEMKKKEKEQSEAG 101
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A1Y1Y6R6_9FUNG (Transcriptional activator HAP2 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6R6_9FUNG)

HSP 1 Score: 94.7 bits (234), Expect = 5.240e-20
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 2 
Query:  641 RMALPTDQVT--EDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEG 904
            R+ LP++ V+  E+ P YVNAKQY RI+KRR ARAKLE R ++   RK +LH+SRH HA RR RGPGGRFLT AE+ E  K  E ++ +G
Sbjct:    3 RVPLPSEVVSTGEEEPLYVNAKQYHRILKRRAARAKLEERNRIQRNRKPYLHESRHRHAMRRPRGPGGRFLTAAEIAELDKNKENENDDG 92
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BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A2D4BCT5_PYTIN (Nuclear transcription factor Y subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCT5_PYTIN)

HSP 1 Score: 95.5 bits (236), Expect = 7.180e-20
Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 2 
Query:  587 NPAAMMLMPYMAQYPIYSRMAL-PTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAEL 862
            N   MM+ PYM    ++ RMA   T++V E+ P YVNAKQY RI+ RR+ RAKLEA+     QRK++LH SRH HA RR RGPGGRFLT+ EL
Sbjct:   18 NANLMMMQPYMLNQALFPRMATGATNEVVEEEPVYVNAKQYHRIMIRRQQRAKLEAKLGANRQRKAYLHHSRHRHAMRRPRGPGGRFLTREEL 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD26_9PHAE2.030e-4991.84Nuclear transcription factor Y subunit n=1 Tax=Ect... [more]
D7FQ09_ECTSI2.300e-4390.32Nuclear transcription factor Y subunit n=1 Tax=Ect... [more]
A0A7R9U4I3_9STRA4.180e-2459.80Nuclear transcription factor Y subunit n=2 Tax=Pin... [more]
A0A835ZFN6_9STRA8.500e-2464.95Nuclear transcription factor Y subunit n=1 Tax=Tri... [more]
A0A433Q1P5_9FUNG3.750e-2254.17Transcriptional activator HAP2 n=2 Tax=Jimgerdeman... [more]
A0A1V9ZVB7_9STRA2.760e-2155.34Nuclear transcription factor Y subunit n=1 Tax=Thr... [more]
A0A1Y1YW95_9FUNG2.270e-2058.43Transcriptional activator HAP2 n=1 Tax=Basidiobolu... [more]
A0A075AQC5_ROZAC2.720e-2059.09Transcriptional activator HAP2 n=1 Tax=Rozella all... [more]
A0A1Y1Y6R6_9FUNG5.240e-2056.67Transcriptional activator HAP2 n=1 Tax=Basidiobolu... [more]
A0A2D4BCT5_PYTIN7.180e-2056.99Nuclear transcription factor Y subunit n=1 Tax=Pyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12058contigH-elongata_contig12058:672..4680 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.4
Seed ortholog evalue2.7e-38
Seed eggNOG ortholog2880.D7FQ09
Preferred nameHAP2
KEGG koko:K08064
KEGG Pathwayko04612,ko05152,map04612,map05152
GOsGO:0000429,GO:0000436,GO:0000976,GO:0000977,GO:0000978,GO:0000979,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001077,GO:0001228,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0006109,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010106,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0016602,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019725,GO:0030003,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032774,GO:0032991,GO:0033217,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042592,GO:0042594,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043457,GO:0043467,GO:0043565,GO:0043618,GO:0043620,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0045893,GO:0045935,GO:0045944,GO:0045990,GO:0045991,GO:0046483,GO:0046916,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0065007,GO:0065008,GO:0070887,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0098771,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
EggNOG free text desc.DNA-binding transcription factor activity
EggNOG OGsCOG5224@1,KOG1561@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistone-like transcription factor, NF-YA subunit
Ec32 orthologEc-01_007920.1
Exons5
Model size1401
Cds size1197
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929706.9769406-UTR-H-elongata_contig12058:671..7141622929706.9769406-UTR-H-elongata_contig12058:671..714Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12058 672..714 +
1691679126.5680358-UTR-H-elongata_contig12058:671..7141691679126.5680358-UTR-H-elongata_contig12058:671..714Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12058 672..714 +
1622929707.0861096-UTR-H-elongata_contig12058:4519..46801622929707.0861096-UTR-H-elongata_contig12058:4519..4680Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12058 4520..4680 +
1691679126.6255803-UTR-H-elongata_contig12058:4519..46801691679126.6255803-UTR-H-elongata_contig12058:4519..4680Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12058 4520..4680 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929706.9984462-CDS-H-elongata_contig12058:714..12301622929706.9984462-CDS-H-elongata_contig12058:714..1230Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 715..1230 +
1691679126.5777285-CDS-H-elongata_contig12058:714..12301691679126.5777285-CDS-H-elongata_contig12058:714..1230Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 715..1230 +
1622929707.018347-CDS-H-elongata_contig12058:2134..22361622929707.018347-CDS-H-elongata_contig12058:2134..2236Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 2135..2236 +
1691679126.5866704-CDS-H-elongata_contig12058:2134..22361691679126.5866704-CDS-H-elongata_contig12058:2134..2236Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 2135..2236 +
1622929707.0335884-CDS-H-elongata_contig12058:3205..33221622929707.0335884-CDS-H-elongata_contig12058:3205..3322Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 3206..3322 +
1691679126.5970972-CDS-H-elongata_contig12058:3205..33221691679126.5970972-CDS-H-elongata_contig12058:3205..3322Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 3206..3322 +
1622929707.055921-CDS-H-elongata_contig12058:3558..37321622929707.055921-CDS-H-elongata_contig12058:3558..3732Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 3559..3732 +
1691679126.605779-CDS-H-elongata_contig12058:3558..37321691679126.605779-CDS-H-elongata_contig12058:3558..3732Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 3559..3732 +
1622929707.069777-CDS-H-elongata_contig12058:4231..45191622929707.069777-CDS-H-elongata_contig12058:4231..4519Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 4232..4519 +
1691679126.6161265-CDS-H-elongata_contig12058:4231..45191691679126.6161265-CDS-H-elongata_contig12058:4231..4519Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12058 4232..4519 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12058.1579.1prot_H-elongata_contig12058.1579.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12058 715..4519 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12058.1579.1

>prot_H-elongata_contig12058.1579.1 ID=prot_H-elongata_contig12058.1579.1|Name=mRNA_H-elongata_contig12058.1579.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=399bp
MDGAAQQDQRLPQPQLALQLPTPPPPAHEHNTKASPSSQVPGNQQSQSLL
TGLTNPSLQVGLPDTTQQKQQQPQEQQPPQEQSQSQSGLPIQMLQQGMAQ
SQTLFHQQAQQQGAGPLRHLGQQQQTGGPGIGAGVGGAATEGVDAVAEGQ
QQQQAHNLLAQAMSTQQQQQLMNMYMAAIAQNPAAMMLMPYMAQYPIYSR
MALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHK
SRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEGATAPAKVAGPGKS
NSQPPPPAPRNLGSSTAVIAPVASKPASNPSVPVAPLNFVKEPGVVLMTG
PTPGGSEFSNASFVIPSPVDGGSSAGDVGVGHDAVAEHPSDKPPTDNE*
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mRNA from alignment at H-elongata_contig12058:672..4680+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12058.1579.1 ID=mRNA_H-elongata_contig12058.1579.1|Name=mRNA_H-elongata_contig12058.1579.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4009bp|location=Sequence derived from alignment at H-elongata_contig12058:672..4680+ (Himanthalia elongata Himel1 dioecious)
TTCATTACGTGGGCAAGACAAGAAGCCGCGAGGGTCATTAGACATGGACG
GCGCCGCTCAGCAAGATCAGAGGCTACCTCAACCTCAGCTAGCGCTGCAG
CTTCCAACTCCCCCACCTCCCGCTCACGAACACAACACGAAGGCATCACC
GTCGTCTCAAGTGCCTGGTAATCAGCAGTCACAGTCATTGCTGACAGGAC
TTACCAATCCTTCACTCCAAGTGGGCCTTCCTGATACGACTCAACAAAAG
CAGCAGCAACCGCAAGAGCAGCAGCCGCCGCAGGAGCAGTCGCAGTCGCA
GTCAGGTTTGCCAATTCAAATGTTGCAGCAGGGAATGGCTCAGAGTCAGA
CGCTTTTCCACCAACAAGCTCAACAGCAGGGCGCTGGGCCGCTACGTCAC
CTTGGTCAGCAACAGCAGACCGGAGGACCAGGAATAGGTGCGGGGGTCGG
GGGAGCAGCTACGGAGGGTGTTGACGCTGTGGCCGAAGGCCAGCAGCAAC
AGCAAGCGCATAATCTGCTCGCGCAGGCGATGTCCACTCAGCAGCAGCAG
CAGCTGATGGTGAGGGTGGTCTCCGCTTTGAATTTACTCCAAGCAGTGCG
CAAGAACCTCATGCAGTATTATACATTTTGGTACTCCTCTGTAGTGGCTT
GGCGTGGCGGCATATTTTCCCTACTAGTAGTTACAAGCAGCATAGCATAA
TACTTTTAAATATTAATACCATGGGAAGAGAAAAATTCAAAACAACCGGT
AGGTACCATTGCCCTTTCCTTTTCTATTAGAGAGTGCGTTTAACCTTTTT
TTCTTTCCGGGTGGTGGTTTTGCTACCTTGTAACCAGGGACTGGGTGTAT
TGACATAAGCTTACGTGATAATTCAATCAATCAATCAATCAATCAATCAA
TCACAATCAATCATTCAGGAAGCATTGACAAAAAACACCCTCTGCTTGAT
CGTTGGTGTACTGTAGCGATAAACTATGGAGGAGTAAGTCTAGATTGCAG
TGGTGGCGTTTGAAGCTATCGCATCCCACGGCGTCCTCCTAACTTCTCGG
CCCAGCACGGTAAAGGTAGAAAATCATCAAGAGCGGGGTAGGTAACCCCC
CCTCTCCAACCCCCGAGTACAGCACGCAAGAGAATCCTCGAATGGGTTTT
ACTACGTCTAATAGAGCGGGGGGTTTGCACATATTATGTGGCCGGAGAAA
AACTCTAAAAGCTTCACGATGTGTTTTTTCACGAAAAATCCGGAAGGGAC
TCGTCTTCGGGGCGTGATGTGTTTTAGATATTTTGGGAATCTTGTCTTGA
AAATCAGTATCAGTAACCCACGTAATGAAAAAAAAGAATCGGCCTTCGCG
ATGGTTGCGCTGAGCTGTAGTTTATCCTGCCCACTTTTCCCATACCTTTG
CTGTCCTCGCCGTGACCGATATCTGCGCCCCCCGCCCAACCCTACCCACG
ATCTCCCTGGCAGAACATGTACATGGCGGCCATTGCGCAGAACCCTGCTG
CGATGATGCTGATGCCTTACATGGCCCAGTATCCTATCTACAGCCGCATG
GCGTTGCCAACGGACGTGAGTGCACCCAGTGTTCTAGACGTTATCTGCGT
TGTGGCATGGTACGGTACGGTACGGTGTGCGCCCTCACCTTTCGAGACGT
GCGGCGGAACTCAACTCAACCATATTGGTCAAACGCCTTGTAATTCTGTA
AGAGCCCCGGGAATCGTGCTGTTGTAAATGGAAATTGATAATTGTGACTA
CATAGTCACAATTTAGTTTGTGGCTACAGGGGTATATAAGGGCCATCCCC
GGGGTTTCCATCATCGAATGAAGGTTCTCAGAGCCCCATGGGTGGGTGGG
TGTGGGTTAGGGTTATGAGAGGGTTGGGTGAGCCAGTATGTAATGGTTGC
AGAGAAACGGCTATTTTACTCTGCATGAAATCAACGTTTTTTGCAATTTT
TTCCTGTAGTCACAAACTAAATTGTGACTACCTAGTGAGAATTATCACTC
CCCGTCGTAAATACCTTCGGTTTCGAGTTACTAACTGTGTCTTCCGTAAT
GAAGTAAAGGAACTCAAAGCCACTTTTAGCGGACGTGCGTGCATCTTGCA
AGGCTGACCGTGCATCTTGCAAGGCTGACGGCATATCCGTGGTGACTGAC
GATCAACCGAACCAACCCAAGTTCAACACGCGGGATTGGCTTGTACACTA
GGGATGTAACATCTTCGACACGATTGAAAATATCTGGGGGGGGTTCTAAA
AACACGCGCGCCTCGCGCCTTCAGTCGTGCAAGTCAGCTGTGATTCTTTC
CTGCAAAGGATTTCCAAACGTGCGGCTCCGTCCCGGTAACTAAAACATTG
TTGACCGCGAAAGCCACGCCTGGGCGCTTGAGGGTCTAGGTAACCAGGGT
AACATCTACAACACTGCAGAGTGTCAAAAATAACCCTCCCGTAACGCAGA
CTCTACCGCTTCGCGTGGCGTTAAGCATGGAAGCATTGAACGGGTTTTCT
CCCCTATGTGGTTACTATCTCTCTTACCAAGCAGCAGGTCACGGAGGACC
CACCCACGTACGTCAACGCGAAACAGTACCGGCGCATCATCAAGCGACGA
GAGGCGAGGGCGAAGCTCGAGGCGCGGCGCAAGGTGGCGCCGCAGCGAAA
GGTGTGAAACGAATACAACGCATGTCGAAGTCACGCCGACGGGAATGCGG
GACGCGGGGGGGGGGATCGGCAATGCCGTGTGGGCGTGAGAGAGCCGAAA
CCACGCCTCTGGTATACATAGAGGGTCAAGTGCAAGTGCAAGTTACTTTG
TTCACTTTTTTTCCCCCGTCATTCTCCTCATCATCGCCGAACCTTTAAAA
AAAATGCATCCGCGCACTTACTCCTTGTTGGCTCTAGTCGTTCCTGCACA
AGTCTCGACATGACCACGCTTGCCGTCGAGTGCGTGGGCCGGGGGGACGC
TTCCTCACGAAGGCCGAGCTCACCGAGTATCGTAAGCAGCTAGAAGCTCA
AGACCCGGAAGGCGCCACCGCGCCGGCGAAGGTTGCGGGCCCCGGGAAAT
CAAACTCTCAGGTGAGGCGAGGAGCCTTGTCCAGTGCCACGGTAGGCATA
CGGCTACATTTTCTCCACCCTGTAGAAACTAGGATATGCTTCGTAAAGTC
CGCCAGAGTACCCCCTCCCCCCCAAGATATGCAGTCAAGCTGATCTATAA
CTGCTGCTGCCAGAACAACAATCACGAGCCCCTTATCCCTACCCCGCATG
ATGGGGTCGTTTTGTTGTGGTTTTTTCCGATGCCGTCTATATCTCTTGTC
GTAGCCGTTTTGCTCTCTCGATTGGCGACCGCGTTCTCACCAGCTTGTGT
GTAAGTTCGCGCTCTTTTTAGCGTCCGCTGCGAAGCTTCGTTGTCAGTGG
TAGAGTGAGAAATCGCAAAAGAGATGTACGCTCCCCGTGGTCCCCCCCAC
CCTTTTAGGTTACCGCCTTTTGCTATAAAGTACCCCCTGACCATTTCTTT
TTCGTATCCCCCCTGCGTTGCCCCCGCTGTACCGCCTCTTCTAAAAACCG
AACTCCACAGCCCCCTCCTCCAGCACCACGAAACCTGGGGAGTTCAACCG
CCGTCATCGCCCCGGTTGCTTCAAAACCCGCATCTAATCCATCGGTGCCC
GTGGCGCCGTTGAACTTCGTGAAGGAGCCGGGAGTGGTGCTAATGACAGG
ACCTACCCCCGGCGGCTCAGAATTCAGTAACGCGTCATTCGTGATTCCAT
CGCCAGTGGACGGTGGTAGCTCTGCGGGCGATGTAGGCGTCGGCCATGAT
GCTGTTGCTGAACATCCCTCAGATAAACCACCGACCGACAATGAGTAAGG
GAGGAAGGGAAAAATCGCCTCGTTTACTCGTGTGCTCGTGTGCGTCTTCT
CTCGCCTCGTATGCTCGTGTGCATGTTTTCTAGAAATGTGGTAGTTGTGG
CTGCATTTTTGGGCTTCAGCCCTTCAGCCTTCTTCTGGATAATTCGTCGT
AAAGGAAGG
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Coding sequence (CDS) from alignment at H-elongata_contig12058:672..4680+

>mRNA_H-elongata_contig12058.1579.1 ID=mRNA_H-elongata_contig12058.1579.1|Name=mRNA_H-elongata_contig12058.1579.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2394bp|location=Sequence derived from alignment at H-elongata_contig12058:672..4680+ (Himanthalia elongata Himel1 dioecious)
ATGGACGGCGCCGCTCAGCAAGATCAGAGGCTACCTCAACCTCAGCTAGC
GCTGCAGCTTCCAACTCCCCCACCTCCCGCTCACGAACACAACACGAAGG
CATCACCGTCGTCTCAAGTGCCTGGTAATCAGCAGTCACAGTCATTGCTG
ACAGGACTTACCAATCCTTCACTCCAAGTGGGCCTTCCTGATACGACTCA
ACAAAAGCAGCAGCAACCGCAAGAGCAGCAGCCGCCGCAGGAGCAGTCGC
AGTCGCAGTCAGGTTTGCCAATTCAAATGTTGCAGCAGGGAATGGCTCAG
AGTCAGACGCTTTTCCACCAACAAGCTCAACAGCAGGGCGCTGGGCCGCT
ACGTCACCTTGGTCAGCAACAGCAGACCGGAGGACCAGGAATAGGTGCGG
GGGTCGGGGGAGCAGCTACGGAGGGTGTTGACGCTGTGGCCGAAGGCCAG
CAGCAACAGCAAGCGCATAATCTGCTCGCGCAGGCGATGTCCACTCAGCA
GCAGCAGCAGCTGATGATGGACGGCGCCGCTCAGCAAGATCAGAGGCTAC
CTCAACCTCAGCTAGCGCTGCAGCTTCCAACTCCCCCACCTCCCGCTCAC
GAACACAACACGAAGGCATCACCGTCGTCTCAAGTGCCTGGTAATCAGCA
GTCACAGTCATTGCTGACAGGACTTACCAATCCTTCACTCCAAGTGGGCC
TTCCTGATACGACTCAACAAAAGCAGCAGCAACCGCAAGAGCAGCAGCCG
CCGCAGGAGCAGTCGCAGTCGCAGTCAGGTTTGCCAATTCAAATGTTGCA
GCAGGGAATGGCTCAGAGTCAGACGCTTTTCCACCAACAAGCTCAACAGC
AGGGCGCTGGGCCGCTACGTCACCTTGGTCAGCAACAGCAGACCGGAGGA
CCAGGAATAGGTGCGGGGGTCGGGGGAGCAGCTACGGAGGGTGTTGACGC
TGTGGCCGAAGGCCAGCAGCAACAGCAAGCGCATAATCTGCTCGCGCAGG
CGATGTCCACTCAGCAGCAGCAGCAGCTGATGAACATGTACATGGCGGCC
ATTGCGCAGAACCCTGCTGCGATGATGCTGATGCCTTACATGGCCCAGTA
TCCTATCTACAGCCGCATGGCGTTGCCAACGGACAACATGTACATGGCGG
CCATTGCGCAGAACCCTGCTGCGATGATGCTGATGCCTTACATGGCCCAG
TATCCTATCTACAGCCGCATGGCGTTGCCAACGGACCAGGTCACGGAGGA
CCCACCCACGTACGTCAACGCGAAACAGTACCGGCGCATCATCAAGCGAC
GAGAGGCGAGGGCGAAGCTCGAGGCGCGGCGCAAGGTGGCGCCGCAGCGA
AAGCAGGTCACGGAGGACCCACCCACGTACGTCAACGCGAAACAGTACCG
GCGCATCATCAAGCGACGAGAGGCGAGGGCGAAGCTCGAGGCGCGGCGCA
AGGTGGCGCCGCAGCGAAAGTCGTTCCTGCACAAGTCTCGACATGACCAC
GCTTGCCGTCGAGTGCGTGGGCCGGGGGGACGCTTCCTCACGAAGGCCGA
GCTCACCGAGTATCGTAAGCAGCTAGAAGCTCAAGACCCGGAAGGCGCCA
CCGCGCCGGCGAAGGTTGCGGGCCCCGGGAAATCAAACTCTCAGTCGTTC
CTGCACAAGTCTCGACATGACCACGCTTGCCGTCGAGTGCGTGGGCCGGG
GGGACGCTTCCTCACGAAGGCCGAGCTCACCGAGTATCGTAAGCAGCTAG
AAGCTCAAGACCCGGAAGGCGCCACCGCGCCGGCGAAGGTTGCGGGCCCC
GGGAAATCAAACTCTCAGCCCCCTCCTCCAGCACCACGAAACCTGGGGAG
TTCAACCGCCGTCATCGCCCCGGTTGCTTCAAAACCCGCATCTAATCCAT
CGGTGCCCGTGGCGCCGTTGAACTTCGTGAAGGAGCCGGGAGTGGTGCTA
ATGACAGGACCTACCCCCGGCGGCTCAGAATTCAGTAACGCGTCATTCGT
GATTCCATCGCCAGTGGACGGTGGTAGCTCTGCGGGCGATGTAGGCGTCG
GCCATGATGCTGTTGCTGAACATCCCTCAGATAAACCACCGACCGACAAT
GAGTAACCCCCTCCTCCAGCACCACGAAACCTGGGGAGTTCAACCGCCGT
CATCGCCCCGGTTGCTTCAAAACCCGCATCTAATCCATCGGTGCCCGTGG
CGCCGTTGAACTTCGTGAAGGAGCCGGGAGTGGTGCTAATGACAGGACCT
ACCCCCGGCGGCTCAGAATTCAGTAACGCGTCATTCGTGATTCCATCGCC
AGTGGACGGTGGTAGCTCTGCGGGCGATGTAGGCGTCGGCCATGATGCTG
TTGCTGAACATCCCTCAGATAAACCACCGACCGACAATGAGTAA
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