mRNA_H-elongata_contig120557.1577.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A0A7S0T3W6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T3W6_9CHLO) HSP 1 Score: 195 bits (495), Expect = 1.550e-59 Identity = 91/141 (64.54%), Postives = 112/141 (79.43%), Query Frame = 1
Query: 4 LPEDFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKRRE--GKYSHDLV 420
+ ED VD+LN +WTP+HATAE+ R L AAG++ L E + ++++EPGGKY+FTRNMS+I AFAVG Y PG+GF I+GAHTDSPCPKLKPVS K GFL VG Q YGGGLWHTWFDRDL VAGR +++R + G+ SH LV
Sbjct: 108 VAEDLVDYLNNSWTPFHATAESARMLAAAGYKRLSE-RDEWKLEPGGKYYFTRNMSSIVAFAVGDKYQPGNGFNIIGAHTDSPCPKLKPVSAVTKGGFLTVGVQTYGGGLWHTWFDRDLSVAGRVLLRRGKDGGRLSHQLV 247
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: C1MGY0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MGY0_MICPC) HSP 1 Score: 192 bits (488), Expect = 1.240e-56 Identity = 90/143 (62.94%), Postives = 111/143 (77.62%), Query Frame = 1
Query: 1 ALPEDFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKRR--EGKYSHDLVR 423
A+ + VD+LN +WT +HAT+E+ R L AAGFE L E + + ++PGGKYFFTRNMS+I AFAVG YAPG+GF I+GAHTDSPCPKLKPVS K GFL VG Q YGGGLWHTWFDRDL V G+ +++R +G+ SH+LVR
Sbjct: 11 AIATELVDYLNASWTSFHATSESSRMLAAAGFERLSEKE-SWDLKPGGKYFFTRNMSSIVAFAVGEKYAPGNGFNIIGAHTDSPCPKLKPVSAIKKGGFLSVGVQTYGGGLWHTWFDRDLSVGGKVLLRRASAKGRLSHELVR 152
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A0A7I4E618_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E618_PHYPA) HSP 1 Score: 194 bits (492), Expect = 2.160e-56 Identity = 87/141 (61.70%), Postives = 114/141 (80.85%), Query Frame = 1
Query: 1 ALPEDFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKRREGKYSHDLVR 423
++ D ++FLNE+WTP+HATAEA+R+LL AGF++L+E Q ++ V+PGG+YFFTRNMS+I AFA+G Y G+GF I+ AHTDSPCPKLKPVS A K+GFL VG Q YGGGLWHTWFDRDL VAGR +++++ G L++
Sbjct: 105 SIVTDMLNFLNESWTPFHATAEAKRQLLKAGFQQLNEEQ-EWTVQPGGRYFFTRNMSSIFAFAIGQKYEAGNGFNIVAAHTDSPCPKLKPVSAASKAGFLNVGVQTYGGGLWHTWFDRDLSVAGRVLLRKKNGTIVQGLIK 244
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A0A7S3FJN7_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FJN7_9VIRI) HSP 1 Score: 186 bits (471), Expect = 2.390e-56 Identity = 90/143 (62.94%), Postives = 107/143 (74.83%), Query Frame = 1
Query: 1 ALPEDFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQP-KYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVK-RREGKYSHDLVR 423
A ++FV FLNEAWTP+HA A A R L AAG+E LDE + + PGGKY+FTRN SAI AFAVG Y PG GF I+GAHTDSPCPK+KP+SKA G+LQVG PYGGGLWHTWFDRDL +AGRA+V+ + G + LV+
Sbjct: 48 ATADEFVAFLNEAWTPFHAVAVAVRMLSAAGYERLDEMGSWQAALRPGGKYYFTRNGSAIVAFAVGSSYQPGGGFNIIGAHTDSPCPKIKPLSKASAHGYLQVGVAPYGGGLWHTWFDRDLSIAGRALVRDAKSGSVTPRLVK 190
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A0A2P2LC87_RHIMU (Uncharacterized protein MANES_10G058500 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LC87_RHIMU) HSP 1 Score: 184 bits (466), Expect = 5.800e-56 Identity = 84/139 (60.43%), Postives = 107/139 (76.98%), Query Frame = 1
Query: 13 DFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKRREGKYSHDLVRNK 429
D +DFLNE+WT +HATAEA+R+L+AAGFE L+E ++++PGG+YFFTRNMS + AFA+G Y G+GF ++ AHTDSPC KLKP S + KS +L V Q YG GLWHTWFDRDL VAGR IV+ R+G + H LV+ K
Sbjct: 80 DLLDFLNESWTQFHATAEAKRQLIAAGFELLNEKDV-WELKPGGRYFFTRNMSCLVAFAIGEKYVAGNGFYVIAAHTDSPCLKLKPKSASSKSSYLMVNVQTYGSGLWHTWFDRDLSVAGRVIVRSRDGSFLHRLVKVK 217
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A0A1Y1HZQ4_KLENI (Zn-dependent aspartyl aminopeptidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZQ4_KLENI) HSP 1 Score: 190 bits (483), Expect = 8.240e-56 Identity = 85/139 (61.15%), Postives = 110/139 (79.14%), Query Frame = 1
Query: 4 LPEDFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKRREGKYSHDLV 420
+ +D VD+LN +WT +HATA ++ L+ AGFE+L E + ++ V+PGGKYFFTRN SA+ AF VGG Y G+GF I+ AHTDSPCPKLKPVS + K GFL VG Q YGGGLW+TWFDRDL VAGR +++R++G+ SH+LV
Sbjct: 19 IAQDLVDYLNASWTSFHATAVSKEMLVKAGFEQLSE-EAEWVVKPGGKYFFTRNASAVIAFTVGGAYKAGNGFNIIAAHTDSPCPKLKPVSLSSKHGFLNVGVQTYGGGLWYTWFDRDLSVAGRVLLRRKDGRLSHELV 156
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A0A7S0GQF4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GQF4_MICPS) HSP 1 Score: 188 bits (477), Expect = 1.240e-55 Identity = 89/140 (63.57%), Postives = 109/140 (77.86%), Query Frame = 1
Query: 10 EDFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKR--REGKYSHDLVR 423
E+ VD+LN +WT +HATAE+ R L AGF L E + ++ ++PGG+YFFTRNMS+I AFAVG Y PG+GF I+GAHTDSPCPKLKPVS K GFL VG Q YGGGLWHTWFDRDL VAGR +++R +G+ SH+LVR
Sbjct: 103 EELVDYLNNSWTSFHATAESARMLTEAGFTRLSE-RDEWALKPGGRYFFTRNMSSIVAFAVGEKYEPGNGFNIIGAHTDSPCPKLKPVSAVKKGGFLGVGVQTYGGGLWHTWFDRDLSVAGRVLLRRGKNKGRTSHELVR 241
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A5C4F0_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5C4F0_VITVI) HSP 1 Score: 182 bits (461), Expect = 4.330e-55 Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 1
Query: 13 DFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKRREGKYSHDLVRNK 429
D +D+LNE+WT +HATAEA+R+L+AAGF+ L+E+ ++ + PGG+Y FTRNMS++ AFA+G Y+ G+GF ++ AHTDSPC KLKP S A KSG+L V Q YGGGLWHTWFDRDL VAGR I K +G + H LV+ K
Sbjct: 77 DLLDYLNESWTQFHATAEAKRQLIAAGFQLLNEND-EWDLRPGGRYLFTRNMSSLVAFAIGEKYSVGNGFHVIAAHTDSPCLKLKPKSAASKSGYLMVNVQTYGGGLWHTWFDRDLSVAGRVIXKGSDGSFLHKLVKVK 214
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A0A7J7NFL5_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NFL5_9MAGN) HSP 1 Score: 181 bits (459), Expect = 4.790e-55 Identity = 82/139 (58.99%), Postives = 109/139 (78.42%), Query Frame = 1
Query: 13 DFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKRREGKYSHDLVRNK 429
D +++LNE+WT +HATAEA+R+LLAAGF L+E+ + ++PGG+YFFTRNMS + AF++G Y+ G+GF ++ AHTDSPC KLKP S + K+G+L V Q YGGGLWHTWFDRDL VAGR IVK +G ++H LV+ K
Sbjct: 66 DLLEYLNESWTQFHATAEAKRQLLAAGFHLLNENDD-WDLKPGGRYFFTRNMSCLIAFSIGEKYSVGNGFHVIAAHTDSPCLKLKPKSASSKAGYLMVNVQTYGGGLWHTWFDRDLSVAGRVIVKTGDGSFAHKLVKVK 203
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Match: A0A2K1K2L2_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K2L2_PHYPA) HSP 1 Score: 187 bits (475), Expect = 1.050e-54 Identity = 87/144 (60.42%), Postives = 112/144 (77.78%), Query Frame = 1
Query: 1 ALPEDFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYFFTRNMSAIAAFAVGGGYAPGDGFVILGAHTDSPCPKLKPVSKAGKSGFLQVGTQPYGGGLWHTWFDRDLGVAGRAIVKRREGK---YSHDLVR 423
++ ++ VDFLN + TP+HA E++ RLL AG+++L E + + +E GG+YFFTRN S I AFAVG Y PG+GF+I+GAHTDSPCPKLKP +K KSGFL+VG YGGGLWHTWFDRDL VAGR ++KR+ G+ YSH+LVR
Sbjct: 4 SVAQELVDFLNASPTPFHAVQESKNRLLKAGYQQLSE-RASWTLEAGGRYFFTRNYSTIVAFAVGKKYVPGNGFLIIGAHTDSPCPKLKPTTKVIKSGFLEVGVSTYGGGLWHTWFDRDLTVAGRVVLKRKNGEKSSYSHELVR 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120557.1577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig120557.1577.1 >prot_H-elongata_contig120557.1577.1 ID=prot_H-elongata_contig120557.1577.1|Name=mRNA_H-elongata_contig120557.1577.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp ALPEDFVDFLNEAWTPYHATAEARRRLLAAGFEELDESQPKYQVEPGGKYback to top mRNA from alignment at H-elongata_contig120557:531..1722+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig120557.1577.1 ID=mRNA_H-elongata_contig120557.1577.1|Name=mRNA_H-elongata_contig120557.1577.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1192bp|location=Sequence derived from alignment at H-elongata_contig120557:531..1722+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig120557:531..1722+ >mRNA_H-elongata_contig120557.1577.1 ID=mRNA_H-elongata_contig120557.1577.1|Name=mRNA_H-elongata_contig120557.1577.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=858bp|location=Sequence derived from alignment at H-elongata_contig120557:531..1722+ (Himanthalia elongata Himel1 dioecious)back to top |