mRNA_H-elongata_contig12037.1570.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: D7FSC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC3_ECTSI) HSP 1 Score: 1322 bits (3422), Expect = 0.000e+0 Identity = 639/757 (84.41%), Postives = 699/757 (92.34%), Query Frame = 1
Query: 1 AGAQETRLFPSAYLVRILAFANVCLGCLYLHWRWTETFPD-IGRWEYTHWQFYWWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMNVTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFRMELANDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQQPDGKVVDDPKDLSLVGKKLGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVAVAGGVYWVIEYGFVLWYANFFSIIVVAGLAMHALWPMVSQSLGWSIPSFYYIKLFLWIFLGFSAVVLAN 2268
A QE RLFPSA+LVR+LA AN LG LYLHWR+T TFP +GRW+Y W+ YWWW FF AE FLAIAVW+GLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVG++SQRLWDSGLP QTLRV+VLDEKRR+EVYRV AG+HRIG LLAGRR+QQILMAEGVTELT KGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPIT+AAWNAA++ K+N+ +VE +A+++D+ARSEAEAKMLGASAMN+TPGF+E++G+ + K+VQKGLPTL+YYSRK AG+PKISPKAGNMN+AIFP+DDP PL G++TIVVVNDARHQLE NFLQRTVPYFFEL GG PTVASGGRYRWAKVAFVQTPQRFRMEL+NDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQ+PDGK+VDDP +L LVGKKLGFRSEMLIEDTHTS++LFRQGWRSVYVNEPGEVLAWCTHQP+SLTWRIKQVLRWHQGAVQLLLFKG+RYTS GG++PT+WHRLYAFD ATYYLQA+PGYVLL+MPIVYGVTG PPF+T LKDYF YFTPFIVTALLPTAISSQWRK DSHRLTRDEQTWLSTTYVQI+AFLQV+WT +TRKS ENAWVAKVPTWPL VFLGQ+ AVAGGVYWV++ GFV+WYANFFSI+VVAGLAMHALWPMVS SLGWSIPSFYYIKLFLW+FLGFSAVVL N
Sbjct: 255 ANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLRVIVLDEKRRLEVYRVAAGVHRIGELLAGRRIQQILMAEGVTELTQKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITAAAWNAAAQAQKSNKPSVEAMAEMSDAARSEAEAKMLGASAMNITPGFFEVYGTHLDPDNMETSKEVQKGLPTLIYYSRKNAGTPKISPKAGNMNAAIFPVDDPTMTPLTGESTIVVVNDARHQLEGNFLQRTVPYFFELAGGHPTVASGGRYRWAKVAFVQTPQRFRMELSNDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQRPDGKIVDDPTELDLVGKKLGFRSEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPSSLTWRIKQVLRWHQGAVQLLLFKGIRYTSFGGHFPTMWHRLYAFDQATYYLQAIPGYVLLIMPIVYGVTGTPPFVTSLKDYFQYFTPFIVTALLPTAISSQWRKIDSHRLTRDEQTWLSTTYVQIYAFLQVVWTGLTRKSPENAWVAKVPTWPLTFVFLGQVFAVAGGVYWVVQKGFVIWYANFFSIVVVAGLAMHALWPMVSLSLGWSIPSFYYIKLFLWVFLGFSAVVLTN 1011
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: D7FSC4_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC4_ECTSI) HSP 1 Score: 805 bits (2080), Expect = 1.520e-270 Identity = 417/760 (54.87%), Postives = 524/760 (68.95%), Query Frame = 1
Query: 10 QETRLFPSAYLVRILAFANVCLGCLYLHWRW--TETFPDIGRWEYTHWQFYWWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSG----LPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMNVTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFRMELANDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQQPDGKVVDDPKDLSLVGKKLGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVAVAGGVYWVIEYGFVLWYANFFSIIVVAGLAMHALWPMVSQSLGWSIPSFYYIKLFLWIFLGFSAVVLANL 2271
Q F S++L+R + NV G Y+ WR+ T+ P +W FF+ E+FL A+W+G +QRLF VQRI+ TMD I S+D VG NA V ILLPTAGE L+VV K L+G+ SQR W S + LRV+VLDEKRR EVY + +G+H + + ++IL AEGV LTP F +WC G+ + H++ D L+ AV ++R +D + + D + L+ S +SK+ E + + +L +L ++++TPGF+++F + K ++YYSRK+AG+P+ISPKAGNMN+A+FP+DDP S PL+G +TIVVVNDARHQL+ FLQRT PYFF++ A +Y+WAKVAFVQTPQRFR +L +DPLGNHA SQYDVIN GKDGIGAVSSSGQGSLWRVEALKG+ PDGK DPKDL LVGKKLGFR+EMLIEDTHTS++LFRQGWRSVYVNEPGEVLAWCTHQPT+LTWRIKQVLRWHQGAVQLL KGLRYTS GG +PT++HR+YAFD ATYYLQA+PGYVLL+MP+VYGVTG+PPF T + YF YF PFIVTA+LPT IS+QWR DSHRLTRDEQTWLSTTYVQI+AFLQV WT + R + ++AWVA+VPTWPL +VF Q VA+AG VYW + GF +Y N SI A L M LWPM++ +G PSF++ KL ++ LG S V+L ++
Sbjct: 82 QTKESFSSSFLIRGVVVLNVASGFTYMVWRFLKTQDVPPEYKWXXX--------VFFMVEVFLLFAIWLGHSQRLFAVQRIRTTMDQIVSIDPAVGANAVVAILLPTAGERLDVVLKCLLGASSQRSWPSSSAAKMGRGDGLRVIVLDEKRRKEVYMLTSGVHALSTQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDVGLSRAVAMVRQMDDLVTGDDGGDLYRLDRNQSFLNQGLDED--------ISKSKEG--DEVEELTHG------VSLLADESVHITPGFFQVF------------RGQAKQAACMIYYSRKDAGTPRISPKAGNMNAAMFPIDDPTSPPLIGPSTIVVVNDARHQLQPEFLQRTTPYFFDVD------AITQQYKWAKVAFVQTPQRFRKDLPDDPLGNHAASQYDVINIGKDGIGAVSSSGQGSLWRVEALKGRSPDGKTGVDPKDLGLVGKKLGFRAEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRIKQVLRWHQGAVQLLYTKGLRYTSFGGSFPTVFHRMYAFDQATYYLQAIPGYVLLLMPVVYGVTGQPPFNTDITSYFSYFVPFIVTAVLPTVISAQWRSIDSHRLTRDEQTWLSTTYVQIYAFLQVSWTRLIRGNPDHAWVARVPTWPLTLVFAAQFVAIAGAVYWTLHNGFDTYYKNTLSICAGAFLGMFYLWPMMALQVGLGRPSFWFFKLGAYVVLGVSMVILGSI 799
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: A0A836CP13_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP13_9STRA) HSP 1 Score: 780 bits (2013), Expect = 6.220e-257 Identity = 404/751 (53.79%), Postives = 503/751 (66.98%), Query Frame = 1
Query: 28 PSAYLVRILAFANVCLGCLYLHWRWTETFPDIGRWEYTHWQFY----WWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLT-DAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMNVTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFRMEL-ANDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQQPDGKVVDDPKDLSLVGKKLGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVAVAGGVYWVIEYGFVLWYANFFSIIVVAGLAMHALWPMVSQSLGWSIPSFYYIKLFLWIFLGFSAVVL 2262
PSA+++R + N+C+ C YL WR T T I + + F W W F+ EI L IA+WIG QRLF VQR+++TMDDI DD VGYN+RV ILLPT GE L+VV KAL+G +S R WD+ + +C RVVVLDEKRR V + A ++ + ++ V IL AEGV +T KGF +W + G GY RKHLY+D LN+A ++L ++ + F LE P A V + ++ T + SA S +A +G + + PG+ + F + LPTL+YY+R++AG+PK+SPKAGNMNSA+F LD P PL+G +TIVVVND RHQL+ FLQRTVPYFFEL A G RYRWAKVAFVQTPQRF + A+DPLGNHA QYDVINHGKDGIGAVSSSGQGSLWRV ALKG DG D K+ LVG +LGFRSEMLIEDTHTS+++FR GW S YVNEPGE L+ CTHQP S+ WRIKQVLRWHQGAVQLL FKG+ +T GG +PTI+HR+YAFD ATYYLQA+PGY+LL+MPI+YGV G+PPF T + ++F++FTPFIVTA+LPT IS WR DSHRLTRDEQ WLSTTYVQI+AFL + W I K +AW + PTWPL VF G+ A+ G + WV + GF W AN +IV A LA+HALWPMVS +GW +PS YY+KL W+ +G V++
Sbjct: 343 PSAFVIRAIVVLNICVSCAYLWWRVTRTIFQIDDYFFGI-PFLPVQGWAWAFYAVEICLTIAIWIGHTQRLFAVQRVRLTMDDIVREDDSVGYNSRVAILLPTNGEKLDVVMKALLGVVSLRGWDTSVEKCAAQRVVVLDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVHAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEASTEAVAMSVFGLEELP----------AGVKGKQDVKRNSKKTTQA------SANSMLQAMNVGN--VTIEPGYVQTF-------------NTNVALPTLIYYTRRDAGTPKVSPKAGNMNSALFALDYPDMPPLIGSSTIVVVNDCRHQLQPEFLQRTVPYFFELD------ADGQRYRWAKVAFVQTPQRFTNNVQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGNSYADVKERGLVGHRLGFRSEMLIEDTHTSIEMFRAGWSSRYVNEPGEHLSICTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTVWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVCGQPPFNTTVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTADAWAVRAPTWPLFAVFAGEFGAIIGALVWVSQEGFERWAANLICVIVSASLAIHALWPMVSLQMGWQVPSLYYLKLLAWLLIGIFIVLI 1055
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: A0A835YSM9_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM9_9STRA) HSP 1 Score: 745 bits (1924), Expect = 2.330e-247 Identity = 384/747 (51.41%), Postives = 491/747 (65.73%), Query Frame = 1
Query: 28 PSAYLVRILAFANVCLGCLYLHWRWTETFPDIGRWEYTHWQFYWWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLT-DAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMNVTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFRM-ELANDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQQPDGKVVDDPKDLSLVGKKLGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVAVAGGVYWVIEYGFVLWYANFFSIIVVAGLAMHALWPMVSQSLGWSIPSFYYIKLFLWIFLGFSAVVL 2262
PSA ++R + N+ + YL+WR T T +I +F +L + RIK+TMD++ DD VGYN+RV ILLPT GENL+VV KA++G IS R WD+ + +C + RVV+LDEKRR V + A ++ + ++ V IL AEGV +T KGF +W + G GY RKHLY+D LN+A ++L ++ + F LE P A V + ++ T + A+ + L + + PG+ + F + LPT +YY+R++AG+PK+SPKAGNMN+A+F LD P PL+G++TIVVVND RHQL+ FLQRT+PYFFEL A G RYRWAKVAFVQTPQRF+ + A+DPLGNHA QYDVINHGKDGIGAVSSSGQGSLWRV ALKG DG+ D + SL+G +LGFRSEMLIEDTHTS+++FR GW S YVNEPGE L+ CTHQP S+ WRIKQVLRWHQGAVQLL FKG+ +T GG +PTI+HR+YAFD ATYYLQA+PGY+LL+MPI+YGVTG+PPF T++ ++F++FTPFIVTA+LPT IS WR DSHRLTRDEQ WLSTTYVQI+AFL + W I K ++AW + PTWPL VVF G+ A+ G + WV + GF W AN SIIV A LA+HALWPMVS +GW +PS YY+KL W+ +G VV+
Sbjct: 118 PSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDS-------------YFFGITWLPV--------------RIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELP----------AGVKGKQDVKRNSKKTTQATAN--------HMLQALNVGNVTIEPGYVQTF-------------NTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELD------ADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVI 800
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: A0A835ZCE1_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE1_9STRA) HSP 1 Score: 746 bits (1926), Expect = 1.870e-245 Identity = 395/770 (51.30%), Postives = 500/770 (64.94%), Query Frame = 1
Query: 31 SAYLVRILAFANVCLGCLYLHWRWTETFPDIGRWEYTHWQF---YWWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSG-LPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMN------------------VTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFRME--LANDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQQPDGKVVDDPKDLSLVGKKLGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVAVAGGVYWVIEYGFVLWYANFFSIIVVAGLAMHALWPMVSQSLGWSIPSFYYIKLFLWIFLGFSAVVLAN 2268
S L+R++ ANV LYL+WR T T I + Y F W W F+ EI L I + IG QR+FP++R V M+D+ DD VGYNARV ILLP+AGE L++V AL+G++SQ W G Q LR+++LDEKRR V + A ++ +G L+ V IL AEG+ KGF DW + G GY RKHLY+D LN+A +L ++ D+ L + PI +AA + A+ K D+ + ARS +A + + + V G+ F S + LPTL+YY+RK+AG+P++SPKAGN+N+AIF +D P+ +PL+GDATIVVVND RHQL FLQRTVPYFFEL A G Y WA+VAFVQTPQRF+ + +DPLGNHA QYDVIN GKDGIGAVSSSG GSLWRVEAL+G DG+ DP + +GK LGFRS+MLIEDTHTS+D+FR GW S YVNEPGE L+ CTHQP S+ WRIKQVLRWHQGAVQLL +KG+ YTS GG +PT+WHR+YAFD ATYYLQA+PGY+LL+MPI+YG+TG PF TR+ D+F+YFTP+IVT +LPT IS W D+++L RDEQ WLSTTYVQI+AFL ++WT++ + HENAW K PTWPL VF GQ+ A+ GG++WV +YGF W N S+ A L MHALWPMVS +GW IPS Y IK+ +W LG +VL N
Sbjct: 218 STPLLRLIMAANVGFSALYLYWRATSTITTIDTYFYNIKYFPVQIWAWVFYGVEICLTIGILIGHTQRMFPIKRAIVAMEDLVREDDCVGYNARVAILLPSAGERLDIVMLALLGAMSQSTWRGGNRTTSQMLRIIILDEKRRKGVLNMTAAVYALGTLIRNPEVVTILQAEGIDAENVKGFYDWWKFGGGYARKHLYNDPWLNKACLLLEYMEKHAGNGEDADSIFL------LSDMPIDAAAGSKAALHGK----------DVEEFARSMLQALNIPTPSPDAGXXXXXXXXXXXXXXXXVDAGYVHQFSSNPD-------------LPTLLYYTRKDAGTPRVSPKAGNLNAAIFAVDYPEDDPLIGDATIVVVNDCRHQLNPTFLQRTVPYFFELD------AEGQHYGWARVAFVQTPQRFKPDQMTLDDPLGNHAAVQYDVINRGKDGIGAVSSSGHGSLWRVEALRGADVDGRRYADPTVVDNIGKTLGFRSQMLIEDTHTSIDMFRHGWTSRYVNEPGEHLSICTHQPNSIAWRIKQVLRWHQGAVQLLFYKGISYTSFGGRFPTLWHRIYAFDQATYYLQAIPGYILLLMPIIYGLTGNSPFETRVADFFLYFTPYIVTGMLPTVISGSWGDVDANKLQRDEQVWLSTTYVQIYAFLSMLWTSLRCQKHENAWAIKAPTWPLFTVFFGQVAALGGGLFWVGKYGFRAWAQNLISVFASALLCMHALWPMVSLQMGWKIPSMYIIKILVWALLG-GFIVLIN 951
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: A0A835YVP7_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP7_9STRA) HSP 1 Score: 719 bits (1855), Expect = 7.630e-238 Identity = 375/758 (49.47%), Postives = 481/758 (63.46%), Query Frame = 1
Query: 10 QETRLFPSAYLVRILAFANVCLGCLYLHWRWTETFPDIGRWEYTHWQFY---------WWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPECQTL-RVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLT-DAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMNVTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFR--MELANDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQQPDGKVVDDPKDLSLVGKKLGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVAVAGGVYWVIEYGFVLWYANFFSIIVVAGLAMHALWPMVSQSLGWSIPSFYYIKLFLWIFLG 2244
Q T S L+R + AN+ LYL WR T T I F+ W W F+ EI L I +WIG +QRLF V YNARVCILLPTAGE L++V AL+G ISQR+W G + +V+VLDEKRR V ++CA ++ + L + QIL AE + KG +W R+G G+ R+HLY+D LN A Q+L + + L G + F L P +P + ++ VE + +A + A + P F + F + GA LPTLVYY+R++ G+P++SPKAGNMNSA+FP+D P E LVGD+TI+ VND RHQL+ NFLQRTVPYFF+L SG Y W +VAFVQTPQRF M +DPLGN+A QYD+INHGKDGIGAVSSSG GSLWRVEALKG DG DP + +L+G ++GFRSEMLIEDTHTS+D+FR GW S YVNEPGE L+ CTHQP S+ WRIKQVLRWHQGAVQLL +KG+ +TS GG +PTIWHR+YAFD ATYYLQA+PGY+LL+MPI+YG+TG+ PF T + ++F++FTP+IV+A+LPT IS WR D+++L RDEQ WLSTTYVQ++AFL ++ TA+ + HENAW K PTWPL VF G+ A+ G ++WV YGF W N S++ A LA+ ALWPMV+ +GW IPS Y++K+ +W LG
Sbjct: 12 QRTTPMSSHLLIRCVILANLAFSVLYLWWRVTSTITTINS------YFFGIKALPVQAWGWTFYAVEICLTIGIWIGHSQRLFAVS----------------SYNARVCILLPTAGERLDIVMLALLGCISQRMWACGRKSKSAMFKVIVLDEKRRKAVLQMCAAVYALATLARSPSIVQILQAENAASIDAKGLYEWWRDGGGHARRHLYNDSHLNRACQLLEFMLRLSLCEGNEGNLFNLTEMPEDQLQSP---------DQKKRSARHLVEGL----------LQALNIPQGAAKIPPAFMQSFST------NGA-------LPTLVYYTRRDPGTPRVSPKAGNMNSALFPIDYPDDESLVGDSTIIAVNDCRHQLQPNFLQRTVPYFFKLQQSAND-GSGLEYTWDRVAFVQTPQRFPKDMNAEDDPLGNNAAVQYDIINHGKDGIGAVSSSGHGSLWRVEALKGLAADGTRYADPTNRALIGSEVGFRSEMLIEDTHTSIDMFRHGWTSRYVNEPGEHLSTCTHQPDSIAWRIKQVLRWHQGAVQLLFYKGITFTSFGGKFPTIWHRVYAFDQATYYLQAIPGYILLLMPIIYGITGESPFNTEVAEFFLFFTPYIVSAMLPTLISGSWRGVDANKLQRDEQVWLSTTYVQVYAFLSMLATALRCQKHENAWAVKAPTWPLFAVFFGEFCAIGGALFWVARYGFDRWSQNLLSVLASAALAVFALWPMVAMQMGWRIPSAYHLKVLVWATLG 714
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: A0A835YHN4_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHN4_9STRA) HSP 1 Score: 621 bits (1601), Expect = 5.080e-199 Identity = 355/821 (43.24%), Postives = 463/821 (56.39%), Query Frame = 1
Query: 10 QETRLFPSAYLVRILAFANVCLGCLYLHWRWTE-TFPDI------GRWEYTH----WQFYWWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCL-ANGLTDAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMNVTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFRMELA-NDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQQPDGKVVDDPKDLSLVGKKLGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIG--GYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVAVAGGVYWVIEYGF-------------------------------------------------------------VLWYANFFSIIVVAGLAMHALWPMVSQSLGWSIPSFYYIKLFLWIFLG 2244
Q R YL+ N+ YL+WR T + DI +W + W + W FF +E L I + IG +QRLF VQR V MDD+ VD + YNARV + LPTAGE +VV KAL+G ++QR W + + +R++VLDEK+R V + A +++ + +Q+IL EGV L W + G G+ R+ L+D L E ++ L+D + NG W SK +E + D + ++ A + + + + PG+ + + S D+ LP ++YYSRKE G+PK+SPKAGNMN+AIFP+D P+ PL+GD+TIVVV+D RHQL+ +FLQRTVPYFFEL T Y WAKVAFVQTPQRF + +DPLGNHA QYDVINHGKDGIGAV SSG GSLWRV AL+G +G+ DP +L LVG KLGFRSEMLIEDTHTS+++FR GWRSVY+NEP E L+ CTHQP ++ WRIKQVLRWHQGAVQLL FKG YT+ YPT+WHRLY FD TYY+QA+PGY+LLVMPIVYGVTG+ PF + D+F+ F PFIVTA+LPT I D RL+RDEQ WLSTTY+Q++AF + W T +AW K PTWPL V F G+ +A+ GG++W+I F + W+ NF S++ A +A+ ALWPMV+ GW S Y KL ++ +G
Sbjct: 44 QGKRFLRREYLIWATVLLNLATAAYYLYWRVTGGSITDIQNGMPGDQWVPDNPGPIWVRIYAWLFFASEACLIIGIMIGHSQRLFAVQRTVVNMDDLALVDSNITYNARVSVFLPTAGEKPDVVLKALLGCMAQRGWGAA-SKLSYMRIIVLDEKKRKGVLALTAAAYKLAECMLNPELQRILQFEGVLSLNAIDVFAWWKTGGGHARQFLHDHDLLYEICAIMELMDDIAKNENG-------------------GKGTWGKPKDPSKVRHFNLE-VGDKSYFEKNRATLEDIIMPNVTIDPGYIKTYES----------SDL---LPRVIYYSRKEPGTPKVSPKAGNMNAAIFPIDYPEQVPLIGDSTIVVVDDCRHQLQPDFLQRTVPYFFELHKPSNT------YTWAKVAFVQTPQRFPFQKEKDDPLGNHAAMQYDVINHGKDGIGAVGSSGHGSLWRVAALRGLDANGRCYADPSNLRLVGHKLGFRSEMLIEDTHTSLEMFRAGWRSVYINEPNENLSVCTHQPDNIAWRIKQVLRWHQGAVQLLWFKGPWYTTFSPCAQYPTMWHRLYGFDQCTYYMQAIPGYMLLVMPIVYGVTGQAPFSATIFDFFVRFIPFIVTAVLPTVILGNRPGVDMDRLSRDEQVWLSTTYIQMYAFFSMTWQIFTCAKAGDAWTVKAPTWPLFVAFYGEFLAILGGLFWLIYNNFQNNRIQNNSSNAAEAFNINSNKEQIRINNLRPDLINEATKNSTQLRMTNEFIISNLIGYPQIQWFLNFISVVASAAMAIFALWPMVAMQKGWKPLSLYQSKLVAYVIVG 824
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: D7FIF6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF6_ECTSI) HSP 1 Score: 512 bits (1318), Expect = 2.960e-148 Identity = 301/753 (39.97%), Postives = 432/753 (57.37%), Query Frame = 1
Query: 10 QETRLFPSAYLVRILAFANVCLGCLYLHWRWTETFPDIGRWEYTHWQFYWWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMNVTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRF--RMELAN-DPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALK-GQQPDG-KVVDDPKDLSLVGKK--LGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVAVAGGVYWVIEYGFVLWYANFF-------SIIVVAGLAMHALWPMVSQSLGWSIPSFYYIKLF 2226
Q T PSA+ +R + N+ YL WR T + + ++ W F F AE +AI + +G + R FP R KV MDD+T +D+ +G +V +L+PT GE V+ KAL G++ RLW S TLR++VLDEKRR EV+++ + ++ + ++ + V++ILM EGV ++ KGF + NG +R +YDD ++V+ +D + N + + ++P A SR+ E + + PG +++ + K +PT+VYYSR +AG P+ISPKAGNMN AIF + PQ EPL+G+A ++V+ND RH+L FLQRTVPYFF T P Y+WA +AF+QTPQRF R + + DPLGN A +Q+D++N G+DG G S GQGS+WRV+ L+ G +PDG K V VG++ LGFR+E+LIEDTHTS+DLFRQGW+SVYVN P E LA CT P ++ WR KQVLRWHQGAVQL ++KG Y +G + T + +++AFD +Y+LQA G +LL+ PIVYG T PF T ++ +YF PFI+T +LPT + W+K+ S ++ RDEQ W +T++VQI+A + +W ITRK NAW K P WPL + F+ +AV + W A + S I A A+H+LWP+VS LG ++P +Y ++F
Sbjct: 1320 QHTESAPSAWWIRTIGVINLLCMAAYLWWRITRSLKGV---DHIIWAF----IFLSAECIMAIGMIVGHSSRSFPAHREKVYMDDLTDIDEAIGA-LKVAVLIPTCGEKTAVMLKALFGNLQLRLWKSKNARRDTLRILVLDEKRREEVHKLVSLVYTLSEVVLDKTVREILMREGVAPISAKGFYEHFANGEHGQR--MYDDVNFIRGIEVVSEIDKLIAEND----------DNISRFSPSV-----AISRIK-------------------ERARRASCFDRKEIQPGQKKVW-------------NRNKYIPTIVYYSRIDAGQPRISPKAGNMNRAIFSFN-PQEEPLIGEAAVIVINDVRHELYPEFLQRTVPYFF--TFDKPRRC----YKWANIAFIQTPQRFHDRTDWNDPDPLGNQAATQFDIVNSGRDGAGGALSCGQGSVWRVQVLRDGIRPDGTKFVKKGMPEDQVGQQGGLGFRAEVLIEDTHTSIDLFRQGWKSVYVNFPNERLACCTLPPDTVKWRWKQVLRWHQGAVQLAMWKGWGYAVLGENWGTTFQKVFAFDAVSYFLQAFAGEILLIFPIVYGFTNSAPFNTWNIEFALYFFPFIITGVLPTVAALGWQKTPSAKVMRDEQIWFATSFVQIYAVMHAVWGTITRKDPSNAWECKCPVWPLYLHFVAITIAVC--------FNTADWAARSYEEPWVWVSCIGSALFALHSLWPVVSFGLGVTMPEAFYTRVF 2000
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: A0A835YIK8_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK8_9STRA) HSP 1 Score: 471 bits (1212), Expect = 1.060e-144 Identity = 296/710 (41.69%), Postives = 399/710 (56.20%), Query Frame = 1
Query: 157 WWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSGYERKHLYDDKKLN--EAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAMN-VTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGDATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFR--MELAN-DPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALK-GQQPDG-KVVDDPKDLS-LVGKK--LGFRSEMLIEDTHTSVDLFRQGWRSVYVNEP----GEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIVA-VAGGVYWVIEYGFV---LWYANFFSIIVVAGL-AMHALWPMVSQSLGWSIPSFYYIKLF 2226
W + FF AE+ L + + + R FP+ R +VTMD++ D Q G + +V ILLPTAGE L+V+ +AL G + RLW S C TLRV++LDEKRR +V ++ + ++ + ++ + V+ IL E V T + F + +G R+H + L V ++ +D + L + L+ +++ P A+ N ++PGF + + + LPTLVY+SR +AG P++SPKAGNMN AIF D + E L+ A ++VVNDARH L+ FLQR +PYFF G Y WA VAFVQTPQRF + A+ DPLGN A +Q+D++N G+DG V S GQGSLWRV AL+ G +PDG K +D D L+G+ LGFRSE+LIEDTHTS+DL RQGWRSVYV P GEVLA CT P S+TWR+KQVLRWHQGAVQL L G Y G++ + W R++A D TY LQA G +LLV PIVYG T + PF + YF PF++TA LPT + W K+ S R+ RDEQ W +TTYVQ+ A VIW + R+ +AW A P WPL FL A VA YW I+ GF +W + + AGL A+H+LWP+VS LG ++P YY ++F
Sbjct: 27 WGYIFFGAEVLLIVGLLVSHVSRAFPIHRERVTMDELVDSDPQTG-DLKVAILLPTAGEKLQVMLQALFGVLQLRLWSSSRARCDTLRVIILDEKRRWQVQQLASLVYTLAEVVLDKGVRDILRREEVPASTARAFYELFSDGL---RRHTMNTDNLMFVRGVAIVDEIDKL-LHDSDGSVHRLDGTATTSLAPPX-------------------XXXXXXXXXXXXXVRARRASCFVQNTISPGFTKTWAKNAR-------------LPTLVYHSRTDAGMPRVSPKAGNMNCAIFRKDG-KGETLIAGAAVIVVNDARHALQPEFLQRALPYFFTRDA-----RRAGAYVWADVAFVQTPQRFDDVPQWADPDPLGNQAATQFDIVNPGRDGASGVLSCGQGSLWRVAALRDGIRPDGSKYIDTKADREGLIGRTGGLGFRSEVLIEDTHTSLDLLRQGWRSVYVVSPASSKGEVLARCTLPPDSVTWRVKQVLRWHQGAVQLALSHGFAYVFGSGHWASPWQRVFALDAITYVLQAFAGQILLVFPIVYGFTNQSPFNALNLQFATYFFPFLITAALPTMAALGWLKTSSDRVMRDEQVWFATTYVQLQAVCNVIWCKLLRRDPADAWTATCPVWPLYAQFLAIAAAMVANTGYW-IQRGFTSPWVWVSC-----MGAGLFALHSLWPLVSFGLGVTLPPAYYNRVF 687
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Match: D8LMC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMC3_ECTSI) HSP 1 Score: 464 bits (1194), Expect = 5.400e-134 Identity = 299/762 (39.24%), Postives = 424/762 (55.64%), Query Frame = 1
Query: 28 PSAYLVRILAFANVCLGCLYLHWRWTETFPDIGRWEYTHWQFYWWWCFFLAEIFLAIAVWIGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPECQTLRVVVLDEKRRVEVYRVCAGLHRIGVLLAGRRVQQILMAEGVTELTPKGFIDWCRNGSG--YERKHL--YDDKKLNEAV--QVLRLLDAMCLANGLTDAFALEARPSSATYNPITSAAWNAASRVSKANETTVETIADLNDSARSEAEAKMLGASAM-NVTPGFYEIFGSGSNSGETGAGKDVQKGLPTLVYYSRKEAGSPKISPKAGNMNSAIFPLDDPQSEPLVGD-ATIVVVNDARHQLEANFLQRTVPYFFELTGGLPTVASGGRYRWAKVAFVQTPQRFRMELANDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQQPDGK-VVDDPKDLSLVGKKLGFRSEMLIEDTHTSVDLFRQGWRSVYVNEPGEVLAWCTHQPTSLTWRIKQVLRWHQGAVQLLLFKGLRYTSIGGYYPTIWHRLYAFDLATYYLQALPGYVLLVMPIVYGVTGKPPFITRLKDYFMYFTPFIVTALLPTAISSQWRKSDSHRLTRDEQTWLSTTYVQIFAFLQVIWTAITRKSHENAWVAKVPTWPLVVVFLGQIV-AVAGGVYWVI-----EYGFVLWYANFFSIIVVAGLAMHALWPMVSQSL-GW-SIPSFYYIKL-FLWIFLGFSAVV 2259
P+++ +++ A NV G Y+ WR T + PD + W W FF E+ L VW QR FP R +MDD+ +D V A VCI++PTAGE ++ + L+G+ SQRLW S LP LR+ VLDEK R EV + L+A + M E + + + W R S Y R +D+ + + +DA+ D + + P A++ A R+ N T +A + S S K A A+ + GF ++F S N +P+++Y +R G+PK+SPKAGNMN+AIFP + P EP++GD A +VVVNDARH+L+ FLQRTVPYFF+L +G +Y WA V FVQTPQRF DPLGNHA+ + V N KDG+G V+S GQGSLWRV+AL+G DGK VVD +VG GFR+E+LIEDTHTS++ F+Q WRS YV E GE LA C QP ++ WR+KQV RWH GAVQLLL G+ + PT H+++ D TYY+QA+ G+ +++MPI++ + + PF T ++ +F P+I+TA +PT ++ W+ + +R+ DEQ WLST YVQI+AF +W IT + +NAW P WPL ++F IV A+ VYW E G ++ A+F + IVV M+++WPMV GW S+PS Y+ K ++ IF+ ++V+
Sbjct: 833 PTSFWIKLSAVLNVVAGAAYIWWRATRSMPDNPK------SVVWNWLFFAGEVILTFGVWTSHLQRSFPSVRDVCSMDDLVEIDSNVSNEATVCIMVPTAGEKMKNLKHVLLGAYSQRLWVSRLPTSSQLRIAVLDEKGRREV--------SVTTLVA-----RGAMGERKSATSWRRCTVWPRPSSSPPYSRSCAPSFDEPFITPKIFMDYFNQMDAL-------DQY---------VFGPECHPAFDMAVRME--NYTGQAKLARASSS--SGVPGKKKAAKALPRLEEGFKKLFRSSPN-------------IPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGDPARVVVVNDARHRLKTEFLQRTVPYFFKLDR-----RTGKKYEWADVGFVQTPQRFEDLGDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGKQVVDSVAKPDIVGHDCGFRAEVLIEDTHTSLEFFKQQWRSAYVCEAGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVGFLCTSRM-PTPLHKMFGLDSLTYYIQAVGGFFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTILAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGVWNRITCANPDNAWNLVCPVWPLGLLFGLLIVSAINTTVYWAFYLSFDEDGIWIFLASFGACIVV----MYSIWPMVKLWWPGWVSLPSAYHQKFCYILIFIALTSVL 1531 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12037.1570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12037.1570.1 >prot_H-elongata_contig12037.1570.1 ID=prot_H-elongata_contig12037.1570.1|Name=mRNA_H-elongata_contig12037.1570.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=675bp MDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGSISQRLWDSGLPEback to top mRNA from alignment at H-elongata_contig12037:156..8631+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12037.1570.1 ID=mRNA_H-elongata_contig12037.1570.1|Name=mRNA_H-elongata_contig12037.1570.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8476bp|location=Sequence derived from alignment at H-elongata_contig12037:156..8631+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12037:156..8631+ >mRNA_H-elongata_contig12037.1570.1 ID=mRNA_H-elongata_contig12037.1570.1|Name=mRNA_H-elongata_contig12037.1570.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4050bp|location=Sequence derived from alignment at H-elongata_contig12037:156..8631+ (Himanthalia elongata Himel1 dioecious)back to top |