mRNA_H-elongata_contig119790.1524.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: D8LSZ5_ECTSI (Glycosyltransferase, family GT64 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSZ5_ECTSI) HSP 1 Score: 194 bits (493), Expect = 6.760e-57 Identity = 94/162 (58.02%), Postives = 115/162 (70.99%), Query Frame = 1
Query: 1 TPARSRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTA---EEKGHGGRWEYLYFWRVVWKLRYSMVLTKAAFVHAKYLELYSG----------VPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAMQM 447
T +RF+PP +L T+AVFVVDDDIAVPCEHLL+A+ TW++HP LVGF+PRSHS+QPPTA +E G G WEYLYFWRV+W + YS++LTKAAFVHAKYLELYS G W + V+AM +TRAYV+++RNCEDIAMQM
Sbjct: 185 TSINNRFMPPSDLMTEAVFVVDDDIAVPCEHLLSAFNTWQQHPDTLVGFFPRSHSYQPPTAAGVKEDGGNGNWEYLYFWRVLWSMEYSIILTKAAFVHAKYLELYSSGXXXXXXXXXXXXXXXXXXXXSAGSAWSEATVRAMVKTRAYVDSHRNCEDIAMQM 346
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: A0A7J7HVY6_CAMSI (Glyco_transf_64 domain-containing protein n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7HVY6_CAMSI) HSP 1 Score: 100 bits (249), Expect = 1.460e-22 Identity = 62/143 (43.36%), Postives = 74/143 (51.75%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLYFWRVVWKLRYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAM 441
+RF ++L TDAVF +DDDI PC + A+ W P A+VGF PR H + KG+ GR+ Y +W V W YSMVL+KAAF H KYL LY T E G R YV NRNCEDIAM
Sbjct: 146 NRFKEIKDLKTDAVFSIDDDIIFPCSSVEFAFSVWRSAPDAMVGFVPRMHW----IDQSKGNAGRYIYGGWWSVWWTGTYSMVLSKAAFFHKKYLSLY-----TYEMPGS-----------------IREYVTKNRNCEDIAM 262
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: A0A0J8BFZ1_BETVV (Glyco_transf_64 domain-containing protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8BFZ1_BETVV) HSP 1 Score: 100 bits (248), Expect = 2.640e-22 Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLYFWRVVWKLRYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAMQM 447
+RF P E+L TDA+F VDDD+ VPC L A+ W+ P A+VGF PR H E+K ++Y +W V W YSMVL+KAAF H KYL+LY+ + A R YV RNCEDIAM +
Sbjct: 165 NRFKPIEDLRTDAIFSVDDDVIVPCGALDFAFTVWQTAPSAMVGFVPRMHL----LDEKKDTHASYKYGGWWSVWWMGTYSMVLSKAAFFHRKYLDLYT----------------------YQMPASIRDYVTNERNCEDIAMSL 283
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: UPI0011D27F37 (glycosyltransferase family 64 protein C4 isoform X1 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D27F37) HSP 1 Score: 99.8 bits (247), Expect = 2.810e-22 Identity = 58/143 (40.56%), Postives = 73/143 (51.05%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLYFWRVVWKLRYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAM 441
+RF P +L TDAVF +DDD+ PC + A+ W P +VGF PR H ++KG R+ Y +W V W YSMVL+KAAF H KYL++Y+ S RE YV NRNCEDIAM
Sbjct: 146 NRFKPITDLKTDAVFSIDDDVIFPCSSVEFAFDVWRSAPDTMVGFVPRIH-----WIDQKGSADRYVYGGWWSVWWTGTYSMVLSKAAFFHKKYLDIYTNQMPASIRE----------------------YVSRNRNCEDIAM 261
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: A0A803M0N3_CHEQI (Glyco_transf_64 domain-containing protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803M0N3_CHEQI) HSP 1 Score: 97.1 bits (240), Expect = 2.880e-22 Identity = 56/145 (38.62%), Postives = 75/145 (51.72%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLYFWRVVWKLRYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAMQM 447
+RF P ++L TDA+F VDDD+ VPC+ L A+ W+ P +VGF PR H E+K ++Y +W V W YSMVL+KAAF H YL++Y+ + A R YV RNCEDIAM +
Sbjct: 72 NRFKPIKDLRTDAIFSVDDDVIVPCDALDFAFTVWQTAPSTMVGFVPRMHW----LGEKKNSHAYYDYGGWWSVWWTGTYSMVLSKAAFFHRNYLDMYTN----------------------QMPASIRDYVTRERNCEDIAMSL 190
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: A0A3B6SQS7_WHEAT (Glyco_transf_64 domain-containing protein n=6 Tax=Triticeae TaxID=147389 RepID=A0A3B6SQS7_WHEAT) HSP 1 Score: 99.8 bits (247), Expect = 3.140e-22 Identity = 58/143 (40.56%), Postives = 76/143 (53.15%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLYFWRVVWKLRYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAM 441
+RF P + L TDAVF VDDD+ VPC L A+G W+ P A+VGF PR H A+ +G+ + Y +W V YSMVL+KA+F+H +YL LY+ + + R YV NRNCEDIAM
Sbjct: 153 NRFRPIQGLRTDAVFSVDDDLVVPCSTLRFAFGVWQSAPSAMVGFVPRMHW----PADPRGNTEEYRYGSWWSVWRTGTYSMVLSKASFLHKRYLNLYTN----------------------RMLPSIRDYVTENRNCEDIAM 269
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: A0A175YN48_DAUCS (Glyco_transf_64 domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YN48_DAUCS) HSP 1 Score: 97.4 bits (241), Expect = 3.410e-22 Identity = 59/143 (41.26%), Postives = 73/143 (51.05%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLYFWRVVWKLRYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAM 441
+RF ++L DAVF +DDDI PC + AY W P A+VGF PR H + KG+ ++ Y +W V W RYSMVL+KAAF H KYL LY+ +S RE Y NRNCEDIAM
Sbjct: 42 NRFKEIKDLKADAVFSIDDDIIFPCSSVELAYSVWRSAPDAMVGFVPRIHW----IDQSKGNVNQYMYGGWWSVWWMGRYSMVLSKAAFFHKKYLSLYTNEMPSSIRE----------------------YTTKNRNCEDIAM 158
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: A0A0K9RR83_SPIOL (Glyco_transf_64 domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RR83_SPIOL) HSP 1 Score: 99.8 bits (247), Expect = 3.680e-22 Identity = 58/145 (40.00%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLYFWRVVWKLRYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAMQM 447
+RF P ++L TDA+F VDDD+ VPC+ L A+ TW+ P ++VGF PR H +E+K + Y +W V W YSMVL+KAAF H KYL++Y+ + A R YV RNCEDIAM +
Sbjct: 165 NRFKPIKDLRTDAIFSVDDDVIVPCDALDFAFTTWQTAPSSMVGFVPRMHW----LSEKKDTHASYYYGGWWSVWWTGSYSMVLSKAAFFHRKYLDMYTN----------------------QMPASIRDYVTRERNCEDIAMSL 283
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: A0A453SNF0_AEGTS (Glyco_transf_64 domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453SNF0_AEGTS) HSP 1 Score: 99.0 bits (245), Expect = 4.460e-22 Identity = 61/145 (42.07%), Postives = 74/145 (51.03%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLY-FWRVVWKL-RYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAM 441
+RF P + L TDAVF VDDD+ VPC L A+G W P A+VGF PR H P K EY Y W VW+ YSMVL+KA+F+H +YL+LY+ + R YV NRNCEDIAM
Sbjct: 131 NRFRPIQGLRTDAVFSVDDDLVVPCSTLRFAFGVWRSAPSAMVGFVPRIHWPADPRGNTK------EYRYGSWWSVWRTGTYSMVLSKASFLHKRYLDLYTN----------------------HMLPSIRDYVTENRNCEDIAM 247
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Match: A0A453SNC2_AEGTS (Glyco_transf_64 domain-containing protein n=5 Tax=Triticinae TaxID=1648030 RepID=A0A453SNC2_AEGTS) HSP 1 Score: 99.0 bits (245), Expect = 5.390e-22 Identity = 61/145 (42.07%), Postives = 74/145 (51.03%), Query Frame = 1
Query: 13 SRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYPRSHSHQPPTAEEKGHGGRWEYLY-FWRVVWKL-RYSMVLTKAAFVHAKYLELYSGVPGTSEREGDGHGGEQWKDNIVKAMARTRAYVEANRNCEDIAM 441
+RF P + L TDAVF VDDD+ VPC L A+G W P A+VGF PR H P K EY Y W VW+ YSMVL+KA+F+H +YL+LY+ + R YV NRNCEDIAM
Sbjct: 144 NRFRPIQGLRTDAVFSVDDDLVVPCSTLRFAFGVWRSAPSAMVGFVPRIHWPADPRGNTK------EYRYGSWWSVWRTGTYSMVLSKASFLHKRYLDLYTN----------------------HMLPSIRDYVTENRNCEDIAM 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119790.1524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig119790.1524.1 >prot_H-elongata_contig119790.1524.1 ID=prot_H-elongata_contig119790.1524.1|Name=mRNA_H-elongata_contig119790.1524.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp TPARSRFLPPENLATDAVFVVDDDIAVPCEHLLAAYGTWERHPRALVGFYback to top mRNA from alignment at H-elongata_contig119790:400..1809- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig119790.1524.1 ID=mRNA_H-elongata_contig119790.1524.1|Name=mRNA_H-elongata_contig119790.1524.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1410bp|location=Sequence derived from alignment at H-elongata_contig119790:400..1809- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig119790:400..1809- >mRNA_H-elongata_contig119790.1524.1 ID=mRNA_H-elongata_contig119790.1524.1|Name=mRNA_H-elongata_contig119790.1524.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=894bp|location=Sequence derived from alignment at H-elongata_contig119790:400..1809- (Himanthalia elongata Himel1 dioecious)back to top |