mRNA_H-elongata_contig119572.1507.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8F0FAQ3_9PHAE (Protein translocase subunit SecA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAQ3_9PHAE) HSP 1 Score: 563 bits (1452), Expect = 1.400e-193 Identity = 292/320 (91.25%), Postives = 301/320 (94.06%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKT+KLKVLAT N++LNK ILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPAL+NSLSG GVHIVTINDYLAKRDAEWVGQ+HRSLGLKVGLIQDETTS LRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKV+NIYSI+DPWIPYILNSLK+RYLF IV EFTGR+M
Sbjct: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTKKLKVLATTNEALNKNILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALVNSLSGKGVHIVTINDYLAKRDAEWVGQVHRSLGLKVGLIQDETTSTLRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVDNIYSIEDPWIPYILNSLKARYLFFRDVHYILKDNNIIIVDEFTGRIM 320
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8F0F7N8_9PHAE (Protein translocase subunit SecA n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7N8_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 6.400e-161 Identity = 250/320 (78.12%), Postives = 272/320 (85.00%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI+LFPQAKTIWDEY L+ IND E EL+ LSD ELKS+T KLK +A+ L+KK LAE FALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVST+PA+ N+LSGNGVHIVTINDYLAKRDAEW+GQIHR LGL+VGLIQDETT RK NY RDITYVTNVDLVFDFLKDNM N KELV +PFNFCIIDEVDSILIDEARTPLIISRES LLVEKYFKA+EV+KYLENKKHFEIDEKAK+ISLTEKGL+ TK LL ++YSIQDPWIPYILNSLK+RYLF I+ EFTGR+M
Sbjct: 1 MIKLFPQAKTIWDEYRLTLDYINDFENELISLSDNELKSRTSKLKYVASKEGILDKKTLAESFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTSPAVANALSGNGVHIVTINDYLAKRDAEWMGQIHRLLGLRVGLIQDETTIESRKINYSRDITYVTNVDLVFDFLKDNMVTNKKELVQKPFNFCIIDEVDSILIDEARTPLIISRESELLVEKYFKADEVSKYLENKKHFEIDEKAKKISLTEKGLDITKTLLNANDLYSIQDPWIPYILNSLKARYLFFRDIHYILKDNQIVIIDEFTGRIM 320
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A6G6D7G4_ECTSI (Protein translocase subunit SecA n=8 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7G4_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 9.890e-160 Identity = 244/320 (76.25%), Postives = 275/320 (85.94%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI+LFPQ KT+WDEY LNSIND+E+EL+ LSD ELKSKT KLK LA+ + L++K + EGFALTREASKRTINLRHYD+QL+GGLVLNDGKIAEMKTGEGKTLVST+PAL+N+LSG GVHIVTINDYLAKRDAEW+GQIHR LGLKVGLIQD S R+ NY RD+TYVTNVDLVFDFLKDNM + KELV +PFNFCIIDEVDSILIDEARTPLIISRESNLLVEK+FKANE +KYLENKKHFEIDEKAK+ISLTE+GL+R KILL VE++YSIQDPWIPYILNSLK+ +LF I+ EFTGR+M
Sbjct: 1 MIKLFPQIKTVWDEYRVTLNSINDIERELITLSDNELKSKTSKLKYLASQSKILDQKTIVEGFALTREASKRTINLRHYDIQLIGGLVLNDGKIAEMKTGEGKTLVSTSPALVNALSGKGVHIVTINDYLAKRDAEWMGQIHRLLGLKVGLIQDGMQSQSRQINYSRDLTYVTNVDLVFDFLKDNMVTDKKELVQKPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKFFKANEASKYLENKKHFEIDEKAKKISLTEQGLDRAKILLNVEDLYSIQDPWIPYILNSLKACHLFFRDIHYILKNNEVVIIDEFTGRIM 320
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8F0F9Y4_9PHAE (Protein translocase subunit SecA n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9Y4_9PHAE) HSP 1 Score: 475 bits (1223), Expect = 4.050e-159 Identity = 250/320 (78.12%), Postives = 269/320 (84.06%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI+LFPQ KTIWDEY LN+IND+EKEL+ LSD ELKS+T KLK A+ D +K ILAEGFALTREASKRTINLR YDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPAL NSLSG GVHIVTINDYLAKRDAEW+GQIHR LGLKVGLIQ E RK NY RDI YVTN DLVFDFLKDNM + KELV FNFCIIDEVDSILIDEARTPLIISRES LLVEKYFKANEV+KYLE+KKHFEIDEKAKRISLTEKGL+RTK+LLKV++ YSIQDPWIPYILN+LK+RYLF I+ EFTGR+M
Sbjct: 1 MIKLFPQGKTIWDEYKQTLNNINDIEKELISLSDSELKSRTLKLKYFASKEDKEDKNILAEGFALTREASKRTINLRQYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALFNSLSGRGVHIVTINDYLAKRDAEWMGQIHRLLGLKVGLIQSEMVPEERKINYSRDIIYVTNADLVFDFLKDNMVTDKKELVQNSFNFCIIDEVDSILIDEARTPLIISRESVLLVEKYFKANEVSKYLEDKKHFEIDEKAKRISLTEKGLDRTKLLLKVDDPYSIQDPWIPYILNALKARYLFFCDIHYIIKGKDIVIIDEFTGRIM 320
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A0S0GC47_COSCS (Protein translocase subunit SecA n=27 Tax=Laminariales TaxID=2886 RepID=A0A0S0GC47_COSCS) HSP 1 Score: 474 bits (1219), Expect = 1.610e-158 Identity = 245/320 (76.56%), Postives = 273/320 (85.31%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI+LFP+ +IWDEY LN INDLEKEL+ LSD ELKS+T KLK D L+K+ LAE FALTREASKRTI+LRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVST+PAL+NSL+G GVHIVTINDYLAKRDAEW+GQIHR LGL+VGLIQ + + RK NY RDITYVTNVDLVFDFLKDNM + KELV RPFNFCIIDEVDSILIDEARTPLIISR+S+LLVEKYFKANE +KYLE+KKHFEIDEKAK+ISLTE+GL+RTKILLKV+N+YSIQDPWIPYILNSLK+RYLF I+ EFTGR+M
Sbjct: 1 MIKLFPRINSIWDEYRPTLNYINDLEKELIPLSDTELKSRTSKLKYFTCKEDGLDKQTLAESFALTREASKRTIDLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTSPALVNSLAGKGVHIVTINDYLAKRDAEWMGQIHRLLGLEVGLIQSDMSIADRKINYSRDITYVTNVDLVFDFLKDNMVTDKKELVQRPFNFCIIDEVDSILIDEARTPLIISRDSDLLVEKYFKANEASKYLEDKKHFEIDEKAKKISLTEQGLKRTKILLKVDNLYSIQDPWIPYILNSLKARYLFFRDIHYILKDNQIVIIDEFTGRIM 320
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A2R4QPU1_9PHAE (Protein translocase subunit SecA n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPU1_9PHAE) HSP 1 Score: 471 bits (1211), Expect = 2.560e-157 Identity = 240/320 (75.00%), Postives = 272/320 (85.00%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI+LF Q + +W++Y T LN IN++EK+L+E+SD ELKSKT KLK N+ ++ K L+E FALTREASKRTINLRHYDVQ+LGGLVLNDG+IAEMKTGEGKTLVST+PA++NSLSGN VHIVTINDYLAKRDAEW+GQIHR LGLKVGLIQ E R+ NYLRDI YVTNVDLVFDFLKDNM L+ K+LV RPFNFCIIDEVDSILIDEARTPLIISRESNL+ EKYFKANEV+KYLENK+HFEIDEKAK++SLTEKGL RTKILL V+NIYSIQDPWIPYILNSLK+RYLF I+ EFTGR+M
Sbjct: 1 MIKLFSQIRNVWNKYQTTLNYINEIEKDLLEISDSELKSKTTKLKYFTCKNNYIDTKTLSEAFALTREASKRTINLRHYDVQILGGLVLNDGQIAEMKTGEGKTLVSTSPAVVNSLSGNSVHIVTINDYLAKRDAEWMGQIHRLLGLKVGLIQGEMPISERRTNYLRDIIYVTNVDLVFDFLKDNMVLDKKDLVQRPFNFCIIDEVDSILIDEARTPLIISRESNLMTEKYFKANEVSKYLENKRHFEIDEKAKKVSLTEKGLARTKILLNVDNIYSIQDPWIPYILNSLKARYLFFRDIHYILKNNQIVIIDEFTGRIM 320
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A6B7EYR5_9PHAE (Protein translocase subunit SecA n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYR5_9PHAE) HSP 1 Score: 459 bits (1182), Expect = 5.850e-153 Identity = 234/322 (72.67%), Postives = 271/322 (84.16%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDS--LNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI+LFPQ KT+WDEY LNSIN+LEKEL LSD ELKSKT KLK LA+ + L++K + EGFALTREASKRTINLRHYD+QL+GGL+LN+GKI EMKTGEGKTLV T+PAL+N+LSGNGVHIVTINDYLAKRD EW+GQI+R LGLKVGLIQD + R+KNY RD+TYVTN DLVFDFLKDNM ++ KELV RPFNFCIIDEVDSILIDEARTPLIISRE++LLVEKYFKANE +KYLENKKHFE+D+KAK+ISLTEKGL K LL V+++Y++QDPWIPYILNSLK+R+LF I+ EFTGR+M
Sbjct: 1 MIKLFPQIKTVWDEYKLTLNSINELEKELTTLSDNELKSKTSKLKYLASISKKVVLDEKTIIEGFALTREASKRTINLRHYDIQLIGGLLLNEGKIVEMKTGEGKTLVCTSPALVNALSGNGVHIVTINDYLAKRDVEWMGQIYRFLGLKVGLIQDGASIENRRKNYSRDLTYVTNTDLVFDFLKDNMVMDKKELVQRPFNFCIIDEVDSILIDEARTPLIISREADLLVEKYFKANEASKYLENKKHFEVDQKAKKISLTEKGLNLAKTLLNVDDLYNVQDPWIPYILNSLKARHLFFRDIHYILRNNEVIIIDEFTGRIM 322
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A0Y0JEU4_9PHAE (Protein translocase subunit SecA n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A0Y0JEU4_9PHAE) HSP 1 Score: 456 bits (1174), Expect = 9.010e-152 Identity = 238/320 (74.38%), Postives = 269/320 (84.06%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI+LF Q + I +EY L N +E +LV+LSD ELKS+T KLK L N+S N KI++E FALTRE SKRTINLRHYDVQ+LGGLVLNDGKIAEM+TGEGKTLVST+PA+IN+LSG+GVHIVTINDYLAKRDAEW+GQIHRSLGLKVGLIQ E ++ R+ NY RDITYVTNVDLVFDFLKDNM LN ++LV RPFNFCIIDEVDSILIDEARTPLIISRE NL+ EKYFKANEV+KYL+NK HFEIDEKAK+ISLTEKGL TKILLKV+N+YSIQDPWIPYILNSLK+RYLF I+ EFTGR+M
Sbjct: 1 MIKLFSQLQNILNEYQPTLEYTNTIENDLVQLSDSELKSRTAKLKYLIGRNNSSNIKIISEAFALTREVSKRTINLRHYDVQILGGLVLNDGKIAEMRTGEGKTLVSTSPAVINALSGSGVHIVTINDYLAKRDAEWMGQIHRSLGLKVGLIQSEMSNEERRLNYSRDITYVTNVDLVFDFLKDNMILNKRDLVQRPFNFCIIDEVDSILIDEARTPLIISRELNLMTEKYFKANEVSKYLQNKIHFEIDEKAKKISLTEKGLIYTKILLKVDNLYSIQDPWIPYILNSLKARYLFFRDIHYILKANQIIIIDEFTGRIM 320
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8F0F730_9PHAE (Protein translocase subunit SecA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F730_9PHAE) HSP 1 Score: 455 bits (1171), Expect = 2.600e-151 Identity = 236/320 (73.75%), Postives = 264/320 (82.50%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI LF KT+W++Y IL IN++E+EL+ELSD ELKS+T K+K A L+KK +AEGFALTREASKRT NLRHYDVQ+LGGLVLNDGKIAEMKTGEGKTLVST+PAL+NS G GVHIVTINDYLAKRDAEW+GQI+R LGL+VGLIQ + RK NYLRDITYVTNVDLVFDFLKDNM +LV PFNFCIIDEVDSILIDEARTPLIISRE NL VEKYFKANEV KYLENKKHF+IDEKAK+ISLT+KGLERTKILLKV N+YSIQDPWIPY+LN+LK++YLF I+ EFTGRVM
Sbjct: 1 MINLFTNTKTVWNKYKEILTLINEIEQELLELSDTELKSRTLKIKYFAFEQKELDKKTIAEGFALTREASKRTTNLRHYDVQILGGLVLNDGKIAEMKTGEGKTLVSTSPALVNSFLGTGVHIVTINDYLAKRDAEWMGQIYRFLGLQVGLIQFDMEVSERKINYLRDITYVTNVDLVFDFLKDNMVTEQMDLVQTPFNFCIIDEVDSILIDEARTPLIISRECNLAVEKYFKANEVAKYLENKKHFDIDEKAKKISLTDKGLERTKILLKVNNLYSIQDPWIPYVLNALKAQYLFFKDVHYILKKKVIVIIDEFTGRVM 320
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8E5XRH0_9PHAE (Protein translocase subunit SecA n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH0_9PHAE) HSP 1 Score: 424 bits (1090), Expect = 2.850e-139 Identity = 218/320 (68.12%), Postives = 255/320 (79.69%), Query Frame = 1
Query: 1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
MI++FP K IW++Y +LN+IN LEKEL LSD+ELK + LK + L+ +L + FAL REAS+RT +LRHYDVQLLGGLVL++GKI EMKTGEGKTLVST PAL+NSL G GVH+VTINDYLAKRDAEW+GQI+R LG +VGLIQ + RK+NY RDITYVTN DLVFDFL+DNM+ + KELV +PFNFCIIDEVDSILIDEARTPLIISRESNL++EKYFKANEV+KYL+ K HF+IDEKAKRISLT KGL+RT +LL NIY IQDPWIPYILN+LK+RYLF I+ EFTGRVM
Sbjct: 1 MIKIFPTEKNIWNKYRPLLNAINSLEKELFVLSDQELKDQAINLKNYSYQVKKLDNNVLVKSFALVREASRRTTDLRHYDVQLLGGLVLHEGKIVEMKTGEGKTLVSTPPALVNSLFGEGVHVVTINDYLAKRDAEWMGQIYRFLGSRVGLIQSNMEYLERKQNYSRDITYVTNTDLVFDFLRDNMSTSLKELVQKPFNFCIIDEVDSILIDEARTPLIISRESNLVLEKYFKANEVSKYLKEKIHFDIDEKAKRISLTNKGLDRTSLLLNTTNIYDIQDPWIPYILNALKARYLFFKNIHYITKNNTVLIIDEFTGRVM 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig119572.1507.1 >prot_H-elongata_contig119572.1507.1 ID=prot_H-elongata_contig119572.1507.1|Name=mRNA_H-elongata_contig119572.1507.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=320bp MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATAback to top mRNA from alignment at H-elongata_contig119572:3..962- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig119572.1507.1 ID=mRNA_H-elongata_contig119572.1507.1|Name=mRNA_H-elongata_contig119572.1507.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=960bp|location=Sequence derived from alignment at H-elongata_contig119572:3..962- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig119572:3..962- >mRNA_H-elongata_contig119572.1507.1 ID=mRNA_H-elongata_contig119572.1507.1|Name=mRNA_H-elongata_contig119572.1507.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1920bp|location=Sequence derived from alignment at H-elongata_contig119572:3..962- (Himanthalia elongata Himel1 dioecious)back to top |