mRNA_H-elongata_contig119572.1507.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig119572.1507.1
Unique NamemRNA_H-elongata_contig119572.1507.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8F0FAQ3_9PHAE (Protein translocase subunit SecA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAQ3_9PHAE)

HSP 1 Score: 563 bits (1452), Expect = 1.400e-193
Identity = 292/320 (91.25%), Postives = 301/320 (94.06%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKT+KLKVLAT N++LNK ILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPAL+NSLSG GVHIVTINDYLAKRDAEWVGQ+HRSLGLKVGLIQDETTS LRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKV+NIYSI+DPWIPYILNSLK+RYLF              IV EFTGR+M
Sbjct:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTKKLKVLATTNEALNKNILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALVNSLSGKGVHIVTINDYLAKRDAEWVGQVHRSLGLKVGLIQDETTSTLRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVDNIYSIEDPWIPYILNSLKARYLFFRDVHYILKDNNIIIVDEFTGRIM 320          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8F0F7N8_9PHAE (Protein translocase subunit SecA n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7N8_9PHAE)

HSP 1 Score: 480 bits (1235), Expect = 6.400e-161
Identity = 250/320 (78.12%), Postives = 272/320 (85.00%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI+LFPQAKTIWDEY   L+ IND E EL+ LSD ELKS+T KLK +A+    L+KK LAE FALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVST+PA+ N+LSGNGVHIVTINDYLAKRDAEW+GQIHR LGL+VGLIQDETT   RK NY RDITYVTNVDLVFDFLKDNM  N KELV +PFNFCIIDEVDSILIDEARTPLIISRES LLVEKYFKA+EV+KYLENKKHFEIDEKAK+ISLTEKGL+ TK LL   ++YSIQDPWIPYILNSLK+RYLF              I+ EFTGR+M
Sbjct:    1 MIKLFPQAKTIWDEYRLTLDYINDFENELISLSDNELKSRTSKLKYVASKEGILDKKTLAESFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTSPAVANALSGNGVHIVTINDYLAKRDAEWMGQIHRLLGLRVGLIQDETTIESRKINYSRDITYVTNVDLVFDFLKDNMVTNKKELVQKPFNFCIIDEVDSILIDEARTPLIISRESELLVEKYFKADEVSKYLENKKHFEIDEKAKKISLTEKGLDITKTLLNANDLYSIQDPWIPYILNSLKARYLFFRDIHYILKDNQIVIIDEFTGRIM 320          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A6G6D7G4_ECTSI (Protein translocase subunit SecA n=8 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7G4_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 9.890e-160
Identity = 244/320 (76.25%), Postives = 275/320 (85.94%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI+LFPQ KT+WDEY   LNSIND+E+EL+ LSD ELKSKT KLK LA+ +  L++K + EGFALTREASKRTINLRHYD+QL+GGLVLNDGKIAEMKTGEGKTLVST+PAL+N+LSG GVHIVTINDYLAKRDAEW+GQIHR LGLKVGLIQD   S  R+ NY RD+TYVTNVDLVFDFLKDNM  + KELV +PFNFCIIDEVDSILIDEARTPLIISRESNLLVEK+FKANE +KYLENKKHFEIDEKAK+ISLTE+GL+R KILL VE++YSIQDPWIPYILNSLK+ +LF              I+ EFTGR+M
Sbjct:    1 MIKLFPQIKTVWDEYRVTLNSINDIERELITLSDNELKSKTSKLKYLASQSKILDQKTIVEGFALTREASKRTINLRHYDIQLIGGLVLNDGKIAEMKTGEGKTLVSTSPALVNALSGKGVHIVTINDYLAKRDAEWMGQIHRLLGLKVGLIQDGMQSQSRQINYSRDLTYVTNVDLVFDFLKDNMVTDKKELVQKPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKFFKANEASKYLENKKHFEIDEKAKKISLTEQGLDRAKILLNVEDLYSIQDPWIPYILNSLKACHLFFRDIHYILKNNEVVIIDEFTGRIM 320          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8F0F9Y4_9PHAE (Protein translocase subunit SecA n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9Y4_9PHAE)

HSP 1 Score: 475 bits (1223), Expect = 4.050e-159
Identity = 250/320 (78.12%), Postives = 269/320 (84.06%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI+LFPQ KTIWDEY   LN+IND+EKEL+ LSD ELKS+T KLK  A+  D  +K ILAEGFALTREASKRTINLR YDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPAL NSLSG GVHIVTINDYLAKRDAEW+GQIHR LGLKVGLIQ E     RK NY RDI YVTN DLVFDFLKDNM  + KELV   FNFCIIDEVDSILIDEARTPLIISRES LLVEKYFKANEV+KYLE+KKHFEIDEKAKRISLTEKGL+RTK+LLKV++ YSIQDPWIPYILN+LK+RYLF              I+ EFTGR+M
Sbjct:    1 MIKLFPQGKTIWDEYKQTLNNINDIEKELISLSDSELKSRTLKLKYFASKEDKEDKNILAEGFALTREASKRTINLRQYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALFNSLSGRGVHIVTINDYLAKRDAEWMGQIHRLLGLKVGLIQSEMVPEERKINYSRDIIYVTNADLVFDFLKDNMVTDKKELVQNSFNFCIIDEVDSILIDEARTPLIISRESVLLVEKYFKANEVSKYLEDKKHFEIDEKAKRISLTEKGLDRTKLLLKVDDPYSIQDPWIPYILNALKARYLFFCDIHYIIKGKDIVIIDEFTGRIM 320          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A0S0GC47_COSCS (Protein translocase subunit SecA n=27 Tax=Laminariales TaxID=2886 RepID=A0A0S0GC47_COSCS)

HSP 1 Score: 474 bits (1219), Expect = 1.610e-158
Identity = 245/320 (76.56%), Postives = 273/320 (85.31%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI+LFP+  +IWDEY   LN INDLEKEL+ LSD ELKS+T KLK      D L+K+ LAE FALTREASKRTI+LRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVST+PAL+NSL+G GVHIVTINDYLAKRDAEW+GQIHR LGL+VGLIQ + +   RK NY RDITYVTNVDLVFDFLKDNM  + KELV RPFNFCIIDEVDSILIDEARTPLIISR+S+LLVEKYFKANE +KYLE+KKHFEIDEKAK+ISLTE+GL+RTKILLKV+N+YSIQDPWIPYILNSLK+RYLF              I+ EFTGR+M
Sbjct:    1 MIKLFPRINSIWDEYRPTLNYINDLEKELIPLSDTELKSRTSKLKYFTCKEDGLDKQTLAESFALTREASKRTIDLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTSPALVNSLAGKGVHIVTINDYLAKRDAEWMGQIHRLLGLEVGLIQSDMSIADRKINYSRDITYVTNVDLVFDFLKDNMVTDKKELVQRPFNFCIIDEVDSILIDEARTPLIISRDSDLLVEKYFKANEASKYLEDKKHFEIDEKAKKISLTEQGLKRTKILLKVDNLYSIQDPWIPYILNSLKARYLFFRDIHYILKDNQIVIIDEFTGRIM 320          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A2R4QPU1_9PHAE (Protein translocase subunit SecA n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPU1_9PHAE)

HSP 1 Score: 471 bits (1211), Expect = 2.560e-157
Identity = 240/320 (75.00%), Postives = 272/320 (85.00%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI+LF Q + +W++Y T LN IN++EK+L+E+SD ELKSKT KLK     N+ ++ K L+E FALTREASKRTINLRHYDVQ+LGGLVLNDG+IAEMKTGEGKTLVST+PA++NSLSGN VHIVTINDYLAKRDAEW+GQIHR LGLKVGLIQ E     R+ NYLRDI YVTNVDLVFDFLKDNM L+ K+LV RPFNFCIIDEVDSILIDEARTPLIISRESNL+ EKYFKANEV+KYLENK+HFEIDEKAK++SLTEKGL RTKILL V+NIYSIQDPWIPYILNSLK+RYLF              I+ EFTGR+M
Sbjct:    1 MIKLFSQIRNVWNKYQTTLNYINEIEKDLLEISDSELKSKTTKLKYFTCKNNYIDTKTLSEAFALTREASKRTINLRHYDVQILGGLVLNDGQIAEMKTGEGKTLVSTSPAVVNSLSGNSVHIVTINDYLAKRDAEWMGQIHRLLGLKVGLIQGEMPISERRTNYLRDIIYVTNVDLVFDFLKDNMVLDKKDLVQRPFNFCIIDEVDSILIDEARTPLIISRESNLMTEKYFKANEVSKYLENKRHFEIDEKAKKVSLTEKGLARTKILLNVDNIYSIQDPWIPYILNSLKARYLFFRDIHYILKNNQIVIIDEFTGRIM 320          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A6B7EYR5_9PHAE (Protein translocase subunit SecA n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYR5_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 5.850e-153
Identity = 234/322 (72.67%), Postives = 271/322 (84.16%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDS--LNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI+LFPQ KT+WDEY   LNSIN+LEKEL  LSD ELKSKT KLK LA+ +    L++K + EGFALTREASKRTINLRHYD+QL+GGL+LN+GKI EMKTGEGKTLV T+PAL+N+LSGNGVHIVTINDYLAKRD EW+GQI+R LGLKVGLIQD  +   R+KNY RD+TYVTN DLVFDFLKDNM ++ KELV RPFNFCIIDEVDSILIDEARTPLIISRE++LLVEKYFKANE +KYLENKKHFE+D+KAK+ISLTEKGL   K LL V+++Y++QDPWIPYILNSLK+R+LF              I+ EFTGR+M
Sbjct:    1 MIKLFPQIKTVWDEYKLTLNSINELEKELTTLSDNELKSKTSKLKYLASISKKVVLDEKTIIEGFALTREASKRTINLRHYDIQLIGGLLLNEGKIVEMKTGEGKTLVCTSPALVNALSGNGVHIVTINDYLAKRDVEWMGQIYRFLGLKVGLIQDGASIENRRKNYSRDLTYVTNTDLVFDFLKDNMVMDKKELVQRPFNFCIIDEVDSILIDEARTPLIISREADLLVEKYFKANEASKYLENKKHFEVDQKAKKISLTEKGLNLAKTLLNVDDLYNVQDPWIPYILNSLKARHLFFRDIHYILRNNEVIIIDEFTGRIM 322          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A0Y0JEU4_9PHAE (Protein translocase subunit SecA n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A0Y0JEU4_9PHAE)

HSP 1 Score: 456 bits (1174), Expect = 9.010e-152
Identity = 238/320 (74.38%), Postives = 269/320 (84.06%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI+LF Q + I +EY   L   N +E +LV+LSD ELKS+T KLK L   N+S N KI++E FALTRE SKRTINLRHYDVQ+LGGLVLNDGKIAEM+TGEGKTLVST+PA+IN+LSG+GVHIVTINDYLAKRDAEW+GQIHRSLGLKVGLIQ E ++  R+ NY RDITYVTNVDLVFDFLKDNM LN ++LV RPFNFCIIDEVDSILIDEARTPLIISRE NL+ EKYFKANEV+KYL+NK HFEIDEKAK+ISLTEKGL  TKILLKV+N+YSIQDPWIPYILNSLK+RYLF              I+ EFTGR+M
Sbjct:    1 MIKLFSQLQNILNEYQPTLEYTNTIENDLVQLSDSELKSRTAKLKYLIGRNNSSNIKIISEAFALTREVSKRTINLRHYDVQILGGLVLNDGKIAEMRTGEGKTLVSTSPAVINALSGSGVHIVTINDYLAKRDAEWMGQIHRSLGLKVGLIQSEMSNEERRLNYSRDITYVTNVDLVFDFLKDNMILNKRDLVQRPFNFCIIDEVDSILIDEARTPLIISRELNLMTEKYFKANEVSKYLQNKIHFEIDEKAKKISLTEKGLIYTKILLKVDNLYSIQDPWIPYILNSLKARYLFFRDIHYILKANQIIIIDEFTGRIM 320          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8F0F730_9PHAE (Protein translocase subunit SecA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F730_9PHAE)

HSP 1 Score: 455 bits (1171), Expect = 2.600e-151
Identity = 236/320 (73.75%), Postives = 264/320 (82.50%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI LF   KT+W++Y  IL  IN++E+EL+ELSD ELKS+T K+K  A     L+KK +AEGFALTREASKRT NLRHYDVQ+LGGLVLNDGKIAEMKTGEGKTLVST+PAL+NS  G GVHIVTINDYLAKRDAEW+GQI+R LGL+VGLIQ +     RK NYLRDITYVTNVDLVFDFLKDNM     +LV  PFNFCIIDEVDSILIDEARTPLIISRE NL VEKYFKANEV KYLENKKHF+IDEKAK+ISLT+KGLERTKILLKV N+YSIQDPWIPY+LN+LK++YLF              I+ EFTGRVM
Sbjct:    1 MINLFTNTKTVWNKYKEILTLINEIEQELLELSDTELKSRTLKIKYFAFEQKELDKKTIAEGFALTREASKRTTNLRHYDVQILGGLVLNDGKIAEMKTGEGKTLVSTSPALVNSFLGTGVHIVTINDYLAKRDAEWMGQIYRFLGLQVGLIQFDMEVSERKINYLRDITYVTNVDLVFDFLKDNMVTEQMDLVQTPFNFCIIDEVDSILIDEARTPLIISRECNLAVEKYFKANEVAKYLENKKHFDIDEKAKKISLTDKGLERTKILLKVNNLYSIQDPWIPYVLNALKAQYLFFKDVHYILKKKVIVIIDEFTGRVM 320          
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Match: A0A8E5XRH0_9PHAE (Protein translocase subunit SecA n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH0_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 2.850e-139
Identity = 218/320 (68.12%), Postives = 255/320 (79.69%), Query Frame = 1
Query:    1 MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATANDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVGLIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEIDEKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFXXXXXXXXXXXXXXIVYEFTGRVM 960
            MI++FP  K IW++Y  +LN+IN LEKEL  LSD+ELK +   LK  +     L+  +L + FAL REAS+RT +LRHYDVQLLGGLVL++GKI EMKTGEGKTLVST PAL+NSL G GVH+VTINDYLAKRDAEW+GQI+R LG +VGLIQ     + RK+NY RDITYVTN DLVFDFL+DNM+ + KELV +PFNFCIIDEVDSILIDEARTPLIISRESNL++EKYFKANEV+KYL+ K HF+IDEKAKRISLT KGL+RT +LL   NIY IQDPWIPYILN+LK+RYLF              I+ EFTGRVM
Sbjct:    1 MIKIFPTEKNIWNKYRPLLNAINSLEKELFVLSDQELKDQAINLKNYSYQVKKLDNNVLVKSFALVREASRRTTDLRHYDVQLLGGLVLHEGKIVEMKTGEGKTLVSTPPALVNSLFGEGVHVVTINDYLAKRDAEWMGQIYRFLGSRVGLIQSNMEYLERKQNYSRDITYVTNTDLVFDFLRDNMSTSLKELVQKPFNFCIIDEVDSILIDEARTPLIISRESNLVLEKYFKANEVSKYLKEKIHFDIDEKAKRISLTNKGLDRTSLLLNTTNIYDIQDPWIPYILNALKARYLFFKNIHYITKNNTVLIIDEFTGRVM 320          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119572.1507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FAQ3_9PHAE1.400e-19391.25Protein translocase subunit SecA n=1 Tax=Desmarest... [more]
A0A8F0F7N8_9PHAE6.400e-16178.13Protein translocase subunit SecA n=2 Tax=Laminaria... [more]
A0A6G6D7G4_ECTSI9.890e-16076.25Protein translocase subunit SecA n=8 Tax=Ectocarpa... [more]
A0A8F0F9Y4_9PHAE4.050e-15978.13Protein translocase subunit SecA n=1 Tax=Chorda as... [more]
A0A0S0GC47_COSCS1.610e-15876.56Protein translocase subunit SecA n=27 Tax=Laminari... [more]
A0A2R4QPU1_9PHAE2.560e-15775.00Protein translocase subunit SecA n=3 Tax=Fucaceae ... [more]
A0A6B7EYR5_9PHAE5.850e-15372.67Protein translocase subunit SecA n=1 Tax=Cladosiph... [more]
A0A0Y0JEU4_9PHAE9.010e-15274.38Protein translocase subunit SecA n=15 Tax=Sargassa... [more]
A0A8F0F730_9PHAE2.600e-15173.75Protein translocase subunit SecA n=1 Tax=Protohalo... [more]
A0A8E5XRH0_9PHAE2.850e-13968.13Protein translocase subunit SecA n=1 Tax=Ishige ok... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119572contigH-elongata_contig119572:3..962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score481.9
Seed ortholog evalue2.4e-133
Seed eggNOG ortholog2880.D1J779
Preferred namesecA
EggNOG free text desc.ATPase-coupled protein transmembrane transporter activity
EggNOG OGs2QS7I@2759,COG0653@1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size960
Cds size960
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929699.7179527-CDS-H-elongata_contig119572:2..9621622929699.7179527-CDS-H-elongata_contig119572:2..962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119572 3..962 -
1691679123.785129-CDS-H-elongata_contig119572:2..9621691679123.785129-CDS-H-elongata_contig119572:2..962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119572 3..962 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119572.1507.1prot_H-elongata_contig119572.1507.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig119572 3..962 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig119572.1507.1

>prot_H-elongata_contig119572.1507.1 ID=prot_H-elongata_contig119572.1507.1|Name=mRNA_H-elongata_contig119572.1507.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=320bp
MIRLFPQAKTIWDEYGTILNSINDLEKELVELSDEELKSKTRKLKVLATA
NDSLNKKILAEGFALTREASKRTINLRHYDVQLLGGLVLNDGKIAEMKTG
EGKTLVSTAPALINSLSGNGVHIVTINDYLAKRDAEWVGQIHRSLGLKVG
LIQDETTSILRKKNYLRDITYVTNVDLVFDFLKDNMALNTKELVHRPFNF
CIIDEVDSILIDEARTPLIISRESNLLVEKYFKANEVTKYLENKKHFEID
EKAKRISLTEKGLERTKILLKVENIYSIQDPWIPYILNSLKSRYLFFFFF
YYILKDNNIIIVYEFTGRVM
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mRNA from alignment at H-elongata_contig119572:3..962-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig119572.1507.1 ID=mRNA_H-elongata_contig119572.1507.1|Name=mRNA_H-elongata_contig119572.1507.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=960bp|location=Sequence derived from alignment at H-elongata_contig119572:3..962- (Himanthalia elongata Himel1 dioecious)
ATGATAAGACTATTTCCACAAGCAAAAACTATTTGGGATGAATATGGAAC AATATTAAATTCTATCAATGATTTAGAAAAAGAGTTAGTAGAGTTAAGTG ATGAAGAATTAAAAAGTAAAACTAGAAAGCTAAAAGTTCTTGCTACTGCA AATGACTCTTTAAATAAAAAAATATTGGCAGAAGGTTTTGCGTTAACTCG TGAAGCTTCTAAAAGAACTATTAATCTTCGACATTATGATGTACAATTAT TAGGAGGATTAGTATTAAATGATGGGAAAATTGCAGAAATGAAAACAGGT GAGGGTAAAACCTTAGTTTCAACAGCACCTGCATTGATTAATTCATTATC AGGTAATGGAGTTCATATCGTAACCATAAATGATTATTTAGCAAAAAGAG ACGCTGAATGGGTAGGTCAAATACATAGAAGTTTAGGTTTAAAAGTTGGG TTAATACAAGATGAAACAACAAGTATACTTCGCAAAAAAAACTATTTACG AGATATAACATATGTGACAAATGTAGATTTAGTTTTTGATTTTTTAAAAG ATAATATGGCCTTAAATACAAAAGAATTGGTACATCGGCCATTTAATTTT TGTATTATTGATGAGGTTGATTCAATTTTAATTGATGAGGCTAGGACTCC ACTAATTATATCTCGTGAATCTAATTTATTAGTAGAAAAATATTTTAAAG CAAATGAGGTTACCAAATATTTAGAGAATAAAAAACATTTTGAAATTGAT GAGAAAGCAAAAAGAATAAGTTTAACCGAAAAAGGTTTAGAACGAACAAA AATATTGTTAAAAGTAGAGAATATATATAGTATTCAGGATCCTTGGATAC CTTATATTTTAAACTCTTTAAAATCTCGATATCTTTTTTTTTTTTTTTTT TATTATATCTTAAAAGATAATAATATTATTATCGTTTATGAATTTACTGG TCGAGTGATG
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Coding sequence (CDS) from alignment at H-elongata_contig119572:3..962-

>mRNA_H-elongata_contig119572.1507.1 ID=mRNA_H-elongata_contig119572.1507.1|Name=mRNA_H-elongata_contig119572.1507.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1920bp|location=Sequence derived from alignment at H-elongata_contig119572:3..962- (Himanthalia elongata Himel1 dioecious)
ATGATAAGACTATTTCCACAAGCAAAAACTATTTGGGATGAATATGGAAC
AATATTAAATTCTATCAATGATTTAGAAAAAGAGTTAGTAGAGTTAAGTG
ATGAAGAATTAAAAAGTAAAACTAGAAAGCTAAAAGTTCTTGCTACTGCA
AATGACTCTTTAAATAAAAAAATATTGGCAGAAGGTTTTGCGTTAACTCG
TGAAGCTTCTAAAAGAACTATTAATCTTCGACATTATGATGTACAATTAT
TAGGAGGATTAGTATTAAATGATGGGAAAATTGCAGAAATGAAAACAGGT
GAGGGTAAAACCTTAGTTTCAACAGCACCTGCATTGATTAATTCATTATC
AGGTAATGGAGTTCATATCGTAACCATAAATGATTATTTAGCAAAAAGAG
ACGCTGAATGGGTAGGTCAAATACATAGAAGTTTAGGTTTAAAAGTTGGG
TTAATACAAGATGAAACAACAAGTATACTTCGCAAAAAAAACTATTTACG
AGATATAACATATGTGACAAATGTAGATTTAGTTTTTGATTTTTTAAAAG
ATAATATGGCCTTAAATACAAAAGAATTGGTACATCGGCCATTTAATTTT
TGTATTATTGATGAGGTTGATTCAATTTTAATTGATGAGGCTAGGACTCC
ACTAATTATATCTCGTGAATCTAATTTATTAGTAGAAAAATATTTTAAAG
CAAATGAGGTTACCAAATATTTAGAGAATAAAAAACATTTTGAAATTGAT
GAGAAAGCAAAAAGAATAAGTTTAACCGAAAAAGGTTTAGAACGAACAAA
AATATTGTTAAAAGTAGAGAATATATATAGTATTCAGGATCCTTGGATAC
CTTATATTTTAAACTCTTTAAAATCTCGATATCTTTTTTTTTTTTTTTTT
TATTATATCTTAAAAGATAATAATATTATTATCGTTTATGAATTTACTGG
TCGAGTGATGATGATAAGACTATTTCCACAAGCAAAAACTATTTGGGATG
AATATGGAACAATATTAAATTCTATCAATGATTTAGAAAAAGAGTTAGTA
GAGTTAAGTGATGAAGAATTAAAAAGTAAAACTAGAAAGCTAAAAGTTCT
TGCTACTGCAAATGACTCTTTAAATAAAAAAATATTGGCAGAAGGTTTTG
CGTTAACTCGTGAAGCTTCTAAAAGAACTATTAATCTTCGACATTATGAT
GTACAATTATTAGGAGGATTAGTATTAAATGATGGGAAAATTGCAGAAAT
GAAAACAGGTGAGGGTAAAACCTTAGTTTCAACAGCACCTGCATTGATTA
ATTCATTATCAGGTAATGGAGTTCATATCGTAACCATAAATGATTATTTA
GCAAAAAGAGACGCTGAATGGGTAGGTCAAATACATAGAAGTTTAGGTTT
AAAAGTTGGGTTAATACAAGATGAAACAACAAGTATACTTCGCAAAAAAA
ACTATTTACGAGATATAACATATGTGACAAATGTAGATTTAGTTTTTGAT
TTTTTAAAAGATAATATGGCCTTAAATACAAAAGAATTGGTACATCGGCC
ATTTAATTTTTGTATTATTGATGAGGTTGATTCAATTTTAATTGATGAGG
CTAGGACTCCACTAATTATATCTCGTGAATCTAATTTATTAGTAGAAAAA
TATTTTAAAGCAAATGAGGTTACCAAATATTTAGAGAATAAAAAACATTT
TGAAATTGATGAGAAAGCAAAAAGAATAAGTTTAACCGAAAAAGGTTTAG
AACGAACAAAAATATTGTTAAAAGTAGAGAATATATATAGTATTCAGGAT
CCTTGGATACCTTATATTTTAAACTCTTTAAAATCTCGATATCTTTTTTT
TTTTTTTTTTTATTATATCTTAAAAGATAATAATATTATTATCGTTTATG
AATTTACTGGTCGAGTGATG
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