mRNA_H-elongata_contig1194.1493.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 341 bits (874), Expect = 3.500e-97 Identity = 170/308 (55.19%), Postives = 236/308 (76.62%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKE-GREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSL 923
FT+VA+VTYP +YQ +D++DV NFDLSW++SAGC + ++FHG+LL+ T+ PI+ +LLL+ T+ AAR +R E L II +KHV+VVLL+ F YS SS +FR F C+ LD +K+YLRADY+IECN ++HR + +YAGFMI++Y +GIPA++A LLF++RDVL D++ RE V+ IS+LW+PY+P FYYE+IEC RR++L GV++ + ++AAQ+AVTL +AF F ++SEGLAPY S+ D W+ R+GH VV SMY ALLLKVDVS+E +SQ VFE +L A H M++ V+ EA V A+SL
Sbjct: 1185 FTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSL 1492
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 337 bits (864), Expect = 1.160e-96 Identity = 167/321 (52.02%), Postives = 232/321 (72.27%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKEG-REGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSLTRVQMENAWTRTR 962
FT+VA+VTYP +Y+ F+D +DV NFDLSW++SAGC +DFH +LL T+ P++ +L L+GT+ A +R E L++I +KHVS+VLL+ FL YS S+ +F+ F CE L+D NYLRADYTI+C+ +KH+A +YAGFM+++Y +GIPA++A+LLFR+R VL D RE SDLWKPY+P+ FYYE+IECGRR++L GV++ + ++AAQ+A+TL +AF F ++SEGLAP+ S+ DAW+ R GH VV SMY ALLLKVDVS E SQ V+E++L A HA M++ V+ E V +SL Q + TR R
Sbjct: 929 FTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFR 1249
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 339 bits (870), Expect = 2.290e-96 Identity = 169/309 (54.69%), Postives = 225/309 (72.82%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKE--GREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSL 923
FT VA+VTYP +YQ+F++ ++V NFDLSWM+SAGC + VDFH +LL+ T+GPI LLL T+ A R HR + E LE + HKHV +VLL+ F YS S+ +FR F CE L+D K YL ADY IEC+ +KH+ +YAGFM+LLY GIPA++++LLFR+RDVL +E G++ SDLWKPY+P+ FYYE++EC RR++L GV++ + +S+AQ+A+TL +AF F +ISEGLAPY S+ D W+ R+GH VVV+SMY ALLLKVDVS E +SQ VFE +L H VMVVV + E V A +L
Sbjct: 1284 FTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALAL 1592
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 325 bits (834), Expect = 9.180e-94 Identity = 164/308 (53.25%), Postives = 220/308 (71.43%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSL 923
FT+VA++ +P +YQ F+D +++ NFDL W++SAGC VDFH +LL+ T+ PI+ +L L+ + AAR S E L+ + HKHVS+VLL+ FL Y+ S+ +F+ F CE LDD KNYLRADY IEC+ KH A +YAGFMI+LY +GIPA++ LFR+ DVL D+ RE + P +DLWKPYRP+ FYYE+IEC RR++L GV++ + ++AAQ+AV L +A VF +ISE LAPY S+ D W+CR+GH VV SMY ALLLKVDVS+E +SQ VFE +L A H MV VV+ E + A SL
Sbjct: 650 FTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISL 957
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 332 bits (850), Expect = 1.740e-93 Identity = 174/351 (49.57%), Postives = 241/351 (68.66%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKEG-REGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSLTRVQMENAWTRTRSPIFWIPIWSMRAAPVVARSSRNRDEVEVT 1052
FT VA+VTYP +YQ F+D + V NFDLSW++SAGC +VVDFH +LL+ T+GPI+ +L L T+ A R +R + E L++I ++HVS+VLL+ YS SS +F+ F CE L D + YLRADY I C+ +KH+AL +YAG M+++Y +GIPA++ LLFR+RDVL RE V S+LWKPY+P+ FYYE+IECGRR++L GV++ + ++A Q+A+TL +AF F V+SEGLAPY S+ D W+ R+GH VV SMY ALLLKVDVSNE SQ VFEV+L A HA M++V++ E V +LT + + R FW ++ R + SS + EVE++
Sbjct: 1740 FTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALR-----FWKALFRSRQETIP--SSDDVSEVELS 2083
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 328 bits (842), Expect = 4.470e-93 Identity = 166/321 (51.71%), Postives = 228/321 (71.03%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSLTRVQMENAWTRTR 962
F + A+V YPG+YQ F+D + V FDL W++SAGC + + FHG+LL T+GPI +LLL+GT+ A R +R + E L II KHV V LL+ FL YS SS +F+ F C+ L+D KNYLR DY IEC+ +KH+ +YAGFMILLYPLGIP +++ LLF++R+VL DK R+ + V+ S+LW+PY+P+ FYYE+IECGRRI+LTG+++ + ++AAQ+A+TL +AF F ++SE ++PY S+ + WV R+GH VV SMY ALLLKVDVS+E SQSVFE +L HA M++ V+ E V A TR E+ R R
Sbjct: 1100 FASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLREDLPARFR 1420
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 323 bits (829), Expect = 4.660e-93 Identity = 160/300 (53.33%), Postives = 220/300 (73.33%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGE 899
FT+ A+VTYP +YQ F++ +DV NFD+SW++SAGC + +DFH +LLL T+GPIM +L L+ T+ +R +R + L+++ +HVS+VLL++FL YSG SS VF+ F C+ L+ YLRADY IEC+ +KH+ +YAGFMILLYP+GIPA + LL R+RDVL D +GRE V IS+LW+PYRP+ +YYE+IECGRRI+LTG+++ + ++AAQ+A+TL + VF V+SE L PY D WV R+ H VV S+Y ALLLKVDVSNE +SQ VFE +L A HA M++ V+ E
Sbjct: 690 FTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 989
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 321 bits (823), Expect = 2.360e-90 Identity = 160/305 (52.46%), Postives = 220/305 (72.13%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTA 914
F + A+V YPG+YQ F+D + V FDL W++S GC + +DFHG+LL T+GPI +LLL+GT+ A R +R + E L II KHV V LL+ FL YS SS +F+ F C+ L+D NYLR DY IEC+ +KH+ +YAGFMILLYPLGIP +++ LLFR+R+VL DK R + V+ S+LW+PY+P+ FYYE+IECGRR++LTG+I+ + ++AAQ+A+TL +AF F ++SE ++PY S+ + WV R+GH VV S+Y ALLLKVDVS+E SQSVFE +L HA M++ V+ E V A
Sbjct: 1160 FASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1463
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI) HSP 1 Score: 320 bits (821), Expect = 1.230e-89 Identity = 159/300 (53.00%), Postives = 219/300 (73.00%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGE 899
FT+ A+VTYP +YQ ++ +DV NFD+SW+ISAGC + +DFH +LLL T+GPIM +L L+ T+ +R +R + L+++ +HVS+VLL++F+ YS SS VF+ F C+ L+ YLRADY IEC+ +KH+ +YAGFMILLYP+GIPA + LLFR+RDVL D +GRE V IS+LW+PYRP+ +YYE+IECGRRI+LTG+++ + ++AAQ+A+TL + VF V+SE L PY D WV R+ H VV S+Y ALLLKVDVSNE +SQ VFE +L A HA M++ V+ E
Sbjct: 2428 FTSAANVTYPDVYQRLLNGLDVFNFDISWIISAGCVMNLDFHDRLLLSTIGPIMALLCLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 2727
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 317 bits (812), Expect = 1.380e-88 Identity = 164/308 (53.25%), Postives = 224/308 (72.73%), Query Frame = 3
Query: 3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKEG--REGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYS 920
F++VA+VTYP +YQ F+D V++LNFD+ W+ SAGC + VDFHG+LL+ T+GP++ + LL+ T+ A RR S+ L+ I HKH+S+VLL+ FL YS S+ VF+ F CE LDD+K YLRADY IEC+ ++H+A ++AG MIL+YP+GIP + YLL+++R VL ++ R+ + V+PISDLW PY+P RFYYE+IEC RR+ LTGV++ + ++AAQVAVTL +AF F V S LAPY S+ DA + +GH +V +SMY ALL KVDVS+E SQ VF +L A HA MVV V+ E V YS
Sbjct: 1448 FSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYS 1755 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1194.1493.1 >prot_H-elongata_contig1194.1493.1 ID=prot_H-elongata_contig1194.1493.1|Name=mRNA_H-elongata_contig1194.1493.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=332bp MISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIback to top mRNA from alignment at H-elongata_contig1194:9650..12029+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1194.1493.1 ID=mRNA_H-elongata_contig1194.1493.1|Name=mRNA_H-elongata_contig1194.1493.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2380bp|location=Sequence derived from alignment at H-elongata_contig1194:9650..12029+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1194:9650..12029+ >mRNA_H-elongata_contig1194.1493.1 ID=mRNA_H-elongata_contig1194.1493.1|Name=mRNA_H-elongata_contig1194.1493.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1992bp|location=Sequence derived from alignment at H-elongata_contig1194:9650..12029+ (Himanthalia elongata Himel1 dioecious)back to top |