mRNA_H-elongata_contig1194.1493.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1194.1493.1
Unique NamemRNA_H-elongata_contig1194.1493.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 3.500e-97
Identity = 170/308 (55.19%), Postives = 236/308 (76.62%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKE-GREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSL 923
            FT+VA+VTYP +YQ  +D++DV NFDLSW++SAGC + ++FHG+LL+ T+ PI+ +LLL+ T+  AAR +R   E L II +KHV+VVLL+ F  YS  SS +FR F C+ LD +K+YLRADY+IECN ++HR + +YAGFMI++Y +GIPA++A LLF++RDVL D++  RE    V+ IS+LW+PY+P  FYYE+IEC RR++L GV++ +  ++AAQ+AVTL +AF F ++SEGLAPY S+ D W+ R+GH VV  SMY ALLLKVDVS+E  +SQ VFE +L A H  M++ V+ EA V A+SL
Sbjct: 1185 FTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSL 1492          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 1.160e-96
Identity = 167/321 (52.02%), Postives = 232/321 (72.27%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKEG-REGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSLTRVQMENAWTRTR 962
            FT+VA+VTYP +Y+ F+D +DV NFDLSW++SAGC   +DFH +LL  T+ P++ +L L+GT+  A   +R   E L++I +KHVS+VLL+ FL YS  S+ +F+ F CE L+D  NYLRADYTI+C+ +KH+A  +YAGFM+++Y +GIPA++A+LLFR+R VL D    RE        SDLWKPY+P+ FYYE+IECGRR++L GV++ +  ++AAQ+A+TL +AF F ++SEGLAP+ S+ DAW+ R GH VV  SMY ALLLKVDVS E   SQ V+E++L A HA M++ V+ E  V  +SL   Q +   TR R
Sbjct:  929 FTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFR 1249          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 2.290e-96
Identity = 169/309 (54.69%), Postives = 225/309 (72.82%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKE--GREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSL 923
            FT VA+VTYP +YQ+F++ ++V NFDLSWM+SAGC + VDFH +LL+ T+GPI   LLL  T+  A R HR + E LE + HKHV +VLL+ F  YS  S+ +FR F CE L+D K YL ADY IEC+ +KH+   +YAGFM+LLY  GIPA++++LLFR+RDVL  +E  G++        SDLWKPY+P+ FYYE++EC RR++L GV++ +  +S+AQ+A+TL +AF F +ISEGLAPY S+ D W+ R+GH VVV+SMY ALLLKVDVS E  +SQ VFE +L   H VMVVV + E  V A +L
Sbjct: 1284 FTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALAL 1592          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 9.180e-94
Identity = 164/308 (53.25%), Postives = 220/308 (71.43%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSL 923
            FT+VA++ +P +YQ F+D +++ NFDL W++SAGC   VDFH +LL+ T+ PI+ +L L+  +  AAR    S E L+ + HKHVS+VLL+ FL Y+  S+ +F+ F CE LDD KNYLRADY IEC+  KH A  +YAGFMI+LY +GIPA++   LFR+ DVL  D+  RE    + P +DLWKPYRP+ FYYE+IEC RR++L GV++ +  ++AAQ+AV L +A VF +ISE LAPY S+ D W+CR+GH VV  SMY ALLLKVDVS+E  +SQ VFE +L A H  MV VV+ E  + A SL
Sbjct:  650 FTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISL 957          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 1.740e-93
Identity = 174/351 (49.57%), Postives = 241/351 (68.66%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKEG-REGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSLTRVQMENAWTRTRSPIFWIPIWSMRAAPVVARSSRNRDEVEVT 1052
            FT VA+VTYP +YQ F+D + V NFDLSW++SAGC +VVDFH +LL+ T+GPI+ +L L  T+  A R +R + E L++I ++HVS+VLL+    YS  SS +F+ F CE L D + YLRADY I C+ +KH+AL +YAG M+++Y +GIPA++  LLFR+RDVL      RE    V   S+LWKPY+P+ FYYE+IECGRR++L GV++ +  ++A Q+A+TL +AF F V+SEGLAPY S+ D W+ R+GH VV  SMY ALLLKVDVSNE   SQ VFEV+L A HA M++V++ E  V   +LT  + +    R     FW  ++  R   +   SS +  EVE++
Sbjct: 1740 FTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALR-----FWKALFRSRQETIP--SSDDVSEVELS 2083          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 4.470e-93
Identity = 166/321 (51.71%), Postives = 228/321 (71.03%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYSLTRVQMENAWTRTR 962
            F + A+V YPG+YQ F+D + V  FDL W++SAGC + + FHG+LL  T+GPI  +LLL+GT+  A R +R + E L II  KHV V LL+ FL YS  SS +F+ F C+ L+D KNYLR DY IEC+ +KH+   +YAGFMILLYPLGIP +++ LLF++R+VL  DK  R+ +  V+  S+LW+PY+P+ FYYE+IECGRRI+LTG+++ +  ++AAQ+A+TL +AF F ++SE ++PY S+ + WV R+GH VV  SMY ALLLKVDVS+E   SQSVFE +L   HA M++ V+ E  V A   TR   E+   R R
Sbjct: 1100 FASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLREDLPARFR 1420          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 4.660e-93
Identity = 160/300 (53.33%), Postives = 220/300 (73.33%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGE 899
            FT+ A+VTYP +YQ F++ +DV NFD+SW++SAGC + +DFH +LLL T+GPIM +L L+ T+   +R +R +   L+++  +HVS+VLL++FL YSG SS VF+ F C+ L+    YLRADY IEC+ +KH+   +YAGFMILLYP+GIPA +  LL R+RDVL  D +GRE    V  IS+LW+PYRP+ +YYE+IECGRRI+LTG+++ +  ++AAQ+A+TL +  VF V+SE L PY    D WV R+ H VV  S+Y ALLLKVDVSNE  +SQ VFE +L A HA M++ V+ E
Sbjct:  690 FTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 989          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 2.360e-90
Identity = 160/305 (52.46%), Postives = 220/305 (72.13%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTA 914
            F + A+V YPG+YQ F+D + V  FDL W++S GC + +DFHG+LL  T+GPI  +LLL+GT+  A R +R + E L II  KHV V LL+ FL YS  SS +F+ F C+ L+D  NYLR DY IEC+ +KH+   +YAGFMILLYPLGIP +++ LLFR+R+VL  DK  R  +  V+  S+LW+PY+P+ FYYE+IECGRR++LTG+I+ +  ++AAQ+A+TL +AF F ++SE ++PY S+ + WV R+GH VV  S+Y ALLLKVDVS+E   SQSVFE +L   HA M++ V+ E  V A
Sbjct: 1160 FASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1463          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.230e-89
Identity = 159/300 (53.00%), Postives = 219/300 (73.00%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLT-DKEGREGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGE 899
            FT+ A+VTYP +YQ  ++ +DV NFD+SW+ISAGC + +DFH +LLL T+GPIM +L L+ T+   +R +R +   L+++  +HVS+VLL++F+ YS  SS VF+ F C+ L+    YLRADY IEC+ +KH+   +YAGFMILLYP+GIPA +  LLFR+RDVL  D +GRE    V  IS+LW+PYRP+ +YYE+IECGRRI+LTG+++ +  ++AAQ+A+TL +  VF V+SE L PY    D WV R+ H VV  S+Y ALLLKVDVSNE  +SQ VFE +L A HA M++ V+ E
Sbjct: 2428 FTSAANVTYPDVYQRLLNGLDVFNFDISWIISAGCVMNLDFHDRLLLSTIGPIMALLCLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 2727          
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 1.380e-88
Identity = 164/308 (53.25%), Postives = 224/308 (72.73%), Query Frame = 3
Query:    3 FTTVADVTYPGIYQSFVDIVDVLNFDLSWMISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEIIGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNGTKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKEG--REGALSVRPISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFVFTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQSVFEVILFATHAVMVVVVIGEATVTAYS 920
            F++VA+VTYP +YQ F+D V++LNFD+ W+ SAGC + VDFHG+LL+ T+GP++ + LL+ T+  A RR   S+  L+ I HKH+S+VLL+ FL YS  S+ VF+ F CE LDD+K YLRADY IEC+ ++H+A  ++AG MIL+YP+GIP  + YLL+++R VL  ++   R+ +  V+PISDLW PY+P RFYYE+IEC RR+ LTGV++ +  ++AAQVAVTL +AF F V S  LAPY S+ DA +  +GH +V +SMY ALL KVDVS+E   SQ VF  +L A HA MVV V+ E  V  YS
Sbjct: 1448 FSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYS 1755          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1194.1493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0E9_9PHAE3.500e-9755.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G301_ECTSI1.160e-9652.02Polymorphic Outer membrane protein G/I family n=1 ... [more]
D8LSC0_ECTSI2.290e-9654.69Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G2Z8_ECTSI9.180e-9453.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI1.740e-9349.57Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI4.470e-9351.71Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FHH1_ECTSI4.660e-9353.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z1_9PHAE2.360e-9052.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG7_ECTSI1.230e-8953.00LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JY65_9PHAE1.380e-8853.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1194contigH-elongata_contig1194:9650..12029 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.1
Seed ortholog evalue4.1e-80
Seed eggNOG ortholog2880.D8LSC0
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Exons1
Model size2380
Cds size996
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1194.1493.1prot_H-elongata_contig1194.1493.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1194 9739..10734 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929698.620127-UTR-H-elongata_contig1194:9649..97381622929698.620127-UTR-H-elongata_contig1194:9649..9738Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1194 9650..9738 +
1691679123.3548667-UTR-H-elongata_contig1194:9649..97381691679123.3548667-UTR-H-elongata_contig1194:9649..9738Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1194 9650..9738 +
1622929698.6486356-UTR-H-elongata_contig1194:10734..120291622929698.6486356-UTR-H-elongata_contig1194:10734..12029Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1194 10735..12029 +
1691679123.375769-UTR-H-elongata_contig1194:10734..120291691679123.375769-UTR-H-elongata_contig1194:10734..12029Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1194 10735..12029 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929698.6358974-CDS-H-elongata_contig1194:9738..107341622929698.6358974-CDS-H-elongata_contig1194:9738..10734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1194 9739..10734 +
1691679123.3665419-CDS-H-elongata_contig1194:9738..107341691679123.3665419-CDS-H-elongata_contig1194:9738..10734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1194 9739..10734 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1194.1493.1

>prot_H-elongata_contig1194.1493.1 ID=prot_H-elongata_contig1194.1493.1|Name=mRNA_H-elongata_contig1194.1493.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=332bp
MISAGCFIVVDFHGKLLLLTLGPIMIILLLSGTFIYAARRHRASKECLEI
IGHKHVSVVLLVMFLFYSGASSAVFRMFDCEVLDDNKNYLRADYTIECNG
TKHRALMIYAGFMILLYPLGIPAVFAYLLFRNRDVLTDKEGREGALSVRP
ISDLWKPYRPTRFYYELIECGRRIVLTGVILIVDDDSAAQVAVTLFLAFV
FTVISEGLAPYESQTDAWVCRLGHGVVVSSMYYALLLKVDVSNETQTSQS
VFEVILFATHAVMVVVVIGEATVTAYSLTRVQMENAWTRTRSPIFWIPIW
SMRAAPVVARSSRNRDEVEVTSTLNNDATMI*
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mRNA from alignment at H-elongata_contig1194:9650..12029+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1194.1493.1 ID=mRNA_H-elongata_contig1194.1493.1|Name=mRNA_H-elongata_contig1194.1493.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2380bp|location=Sequence derived from alignment at H-elongata_contig1194:9650..12029+ (Himanthalia elongata Himel1 dioecious)
AGTTCACTACTGTGGCGGATGTTACATATCCGGGGATATACCAGAGCTTC GTGGACATCGTGGACGTGCTCAATTTTGACCTTTCGTGGATGATATCGGC GGGGTGCTTTATAGTCGTGGACTTCCACGGCAAGCTTTTACTATTAACAC TCGGGCCCATCATGATCATCTTGTTGCTGAGTGGCACATTCATCTACGCC GCTCGAAGACATCGCGCTTCAAAGGAGTGTTTGGAGATAATCGGGCACAA GCATGTGTCCGTAGTGCTCTTGGTAATGTTTCTTTTCTACTCGGGTGCTA GCTCTGCTGTTTTCCGAATGTTCGACTGCGAAGTCCTCGACGATAATAAA AATTACCTTCGCGCAGACTACACCATCGAATGTAATGGGACGAAGCACAG AGCCCTGATGATATACGCAGGGTTCATGATCTTGCTATATCCACTGGGGA TTCCGGCAGTTTTCGCATACCTCCTGTTTCGAAATCGAGACGTCTTGACG GACAAAGAAGGCCGTGAAGGTGCCTTGAGCGTGAGGCCGATATCAGACCT ATGGAAACCGTACAGGCCGACGCGGTTTTACTACGAGCTAATTGAGTGTG GTCGTCGAATCGTGCTCACGGGGGTGATCCTGATTGTTGATGATGATTCT GCTGCTCAAGTTGCGGTGACGCTTTTCCTCGCGTTTGTCTTCACCGTCAT TTCAGAAGGGTTAGCACCATACGAATCGCAAACCGATGCCTGGGTATGCC GGTTGGGGCATGGTGTGGTGGTTTCCAGCATGTACTATGCTTTGTTGCTA AAGGTTGATGTCTCTAACGAAACGCAAACCAGTCAGAGTGTGTTCGAGGT TATTTTGTTTGCCACGCACGCTGTAATGGTAGTTGTGGTGATCGGTGAGG CTACTGTGACGGCGTATTCGCTTACAAGGGTGCAGATGGAAAACGCATGG ACGAGAACTCGGTCACCAATATTTTGGATACCCATCTGGTCCATGCGTGC GGCACCTGTAGTAGCTCGGAGTTCAAGAAACCGCGATGAGGTAGAAGTGA CTTCAACACTAAATAACGACGCCACTATGATATAGTTTTATATTAGTAGA CGGGATAAACGTCTTCGGTCAATTCTTGCTTATTTATACTTGCTTCTTGC GCTGGTTATAGACGTAAGCTGTCGAGCGGTGTCAAGAGTGGAGCTGCTGC GACGGGGTTCAATGTATGCTATTTCTTCTTCTAGTTGAATATAAAGCTTA CGAATTCGGTTCCGCAAAGATGATCGCTTTTTATGCCTGTTAGTAGTTTT TTATTTCCGTCAGGCGAATTTGTTTTGTAAGTTACCTATATATGATTACG TCCCGAGAGGTATGCTATAAGCTGGTAGAGAGCAAGAAGCCGACCGCGAA AAAACGCGATTATTGTTTCTTCATCATGCTTGATACACGCAAGGTGTTTC TATACGACATCAATGTTTCTAGTTACCATTCCGTCTTCAGGAATTTATCG AAAATGATGAGAAATTCTGTGTACATTTGTTCAAGAGACATTACGCGTTG CTTATAAGGTAACACTCGAGAAGGATTTGAGCTTCGACATTACGGAAAGG GTGTTCGTGGGCTAGATAAGAATTTGCGATGATATATGAGGAGATGCAGG TACTCCTGTCAGATCTCCAGGCATTTGATGTGTTGCTGGCTCTCCAGAAT AGGTAACTAACTCAAATATCTGGAGGTTCGATTTCAGGCTTGTATTTTCT TAATAGTTTACCCCGTAGTTGGTACATCGCACCATGTAGCGTTATCGACA GGAAAAATGTATTTTGGACAAGAAAACGAAGAGGGAGAAACCTGTATCCG CTAAAGACATATATCGGTACGTGCAGAGAAACGCGAGGCGTAATAGTCTA TGGACGTTCCAGGGATAATGATATGGAGCTGTGCGCGGTACAGTGCGGCG TTGGTTGTGGATTATTTCGGGTTCCTCCTGCCACTTCTAAATAAGTGCTG CAAAAGCAGGTGAACGGTATGATGCCTATCGAACCCAGGGATGAGAAACT GAGGGCGGCGATGGGCCAGGGGATGGTATCGAGAGTAATATATGGATTTG TTCCCTCAGCACCCCTGGATCGAACCTGTACAGGGTGAATGTTTACCCTA TGGAAGGTTGTACGGGCCTGTGATGGCCTTGTCAGCCGGTCGTAGAAGGT AGCATTTTCCATGGACAGGGTGTTGGGTAACCTTGTATGCGCCCCGTGCG GACCCTGTAAAGGATGTAAGATTCACTATGGGAATCCGATAAAGAGTGCT GGCCGCCCCGTGTGGACGCTGAACAGGTCACTTGACGCCCCAATGTAGAC CCTATACAAGGCGTCACAAAATAAACTACG
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Coding sequence (CDS) from alignment at H-elongata_contig1194:9650..12029+

>mRNA_H-elongata_contig1194.1493.1 ID=mRNA_H-elongata_contig1194.1493.1|Name=mRNA_H-elongata_contig1194.1493.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1992bp|location=Sequence derived from alignment at H-elongata_contig1194:9650..12029+ (Himanthalia elongata Himel1 dioecious)
ATGATATCGGCGGGGTGCTTTATAGTCGTGGACTTCCACGGCAAGCTTTT
ACTATTAACACTCGGGCCCATCATGATCATCTTGTTGCTGAGTGGCACAT
TCATCTACGCCGCTCGAAGACATCGCGCTTCAAAGGAGTGTTTGGAGATA
ATCGGGCACAAGCATGTGTCCGTAGTGCTCTTGGTAATGTTTCTTTTCTA
CTCGGGTGCTAGCTCTGCTGTTTTCCGAATGTTCGACTGCGAAGTCCTCG
ACGATAATAAAAATTACCTTCGCGCAGACTACACCATCGAATGTAATGGG
ACGAAGCACAGAGCCCTGATGATATACGCAGGGTTCATGATCTTGCTATA
TCCACTGGGGATTCCGGCAGTTTTCGCATACCTCCTGTTTCGAAATCGAG
ACGTCTTGACGGACAAAGAAGGCCGTGAAGGTGCCTTGAGCGTGAGGCCG
ATATCAGACCTATGGAAACCGTACAGGCCGACGCGGTTTTACTACGAGCT
AATTGAGTGTGGTCGTCGAATCGTGCTCACGGGGGTGATCCTGATTGTTG
ATGATGATTCTGCTGCTCAAGTTGCGGTGACGCTTTTCCTCGCGTTTGTC
TTCACCGTCATTTCAGAAGGGTTAGCACCATACGAATCGCAAACCGATGC
CTGGGTATGCCGGTTGGGGCATGGTGTGGTGGTTTCCAGCATGTACTATG
CTTTGTTGCTAAAGGTTGATGTCTCTAACGAAACGCAAACCAGTCAGAGT
GTGTTCGAGGTTATTTTGTTTGCCACGCACGCTGTAATGGTAGTTGTGGT
GATCGGTGAGGCTACTGTGACGGCGTATTCGCTTACAAGGGTGCAGATGG
AAAACGCATGGACGAGAACTCGGTCACCAATATTTTGGATACCCATCTGG
TCCATGCGTGCGGCACCTGTAGTAGCTCGGAGTTCAAGAAACCGCGATGA
GGTAGAAGTGACTTCAACACTAAATAACGACGCCACTATGATATAGATGA
TATCGGCGGGGTGCTTTATAGTCGTGGACTTCCACGGCAAGCTTTTACTA
TTAACACTCGGGCCCATCATGATCATCTTGTTGCTGAGTGGCACATTCAT
CTACGCCGCTCGAAGACATCGCGCTTCAAAGGAGTGTTTGGAGATAATCG
GGCACAAGCATGTGTCCGTAGTGCTCTTGGTAATGTTTCTTTTCTACTCG
GGTGCTAGCTCTGCTGTTTTCCGAATGTTCGACTGCGAAGTCCTCGACGA
TAATAAAAATTACCTTCGCGCAGACTACACCATCGAATGTAATGGGACGA
AGCACAGAGCCCTGATGATATACGCAGGGTTCATGATCTTGCTATATCCA
CTGGGGATTCCGGCAGTTTTCGCATACCTCCTGTTTCGAAATCGAGACGT
CTTGACGGACAAAGAAGGCCGTGAAGGTGCCTTGAGCGTGAGGCCGATAT
CAGACCTATGGAAACCGTACAGGCCGACGCGGTTTTACTACGAGCTAATT
GAGTGTGGTCGTCGAATCGTGCTCACGGGGGTGATCCTGATTGTTGATGA
TGATTCTGCTGCTCAAGTTGCGGTGACGCTTTTCCTCGCGTTTGTCTTCA
CCGTCATTTCAGAAGGGTTAGCACCATACGAATCGCAAACCGATGCCTGG
GTATGCCGGTTGGGGCATGGTGTGGTGGTTTCCAGCATGTACTATGCTTT
GTTGCTAAAGGTTGATGTCTCTAACGAAACGCAAACCAGTCAGAGTGTGT
TCGAGGTTATTTTGTTTGCCACGCACGCTGTAATGGTAGTTGTGGTGATC
GGTGAGGCTACTGTGACGGCGTATTCGCTTACAAGGGTGCAGATGGAAAA
CGCATGGACGAGAACTCGGTCACCAATATTTTGGATACCCATCTGGTCCA
TGCGTGCGGCACCTGTAGTAGCTCGGAGTTCAAGAAACCGCGATGAGGTA
GAAGTGACTTCAACACTAAATAACGACGCCACTATGATATAG
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