mRNA_H-elongata_contig11939.1491.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: A0A6H5KCB2_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCB2_9PHAE) HSP 1 Score: 694 bits (1790), Expect = 1.240e-241 Identity = 343/432 (79.40%), Postives = 385/432 (89.12%), Query Frame = 3
Query: 645 MRQRLSEGRSLFELDARGDSQEMLETRADEHPVLEVIRRRAKAGTKAGSHADGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRWKGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTLPNINERLVDSQLYEPIPFRTALEDGCTHVLVVRSRPDGGNLLGKPKLVERLISRRFFKRKHKDPESYAYVKSGGHKRLYAESVLTLNEASRAKGGDSGPHVMPICLPASEPEVGRLEQRRESILEGVRKGYEHAHVLLRRAVPDHPTARLDGREAALRAFPQSILDEEMDPLVREVLGRSS 1940
MR L++G+SLF+LDARGDSQ MLE R DEHPV+EV+R+R KAGTK GSH DG+K+GLAIEGGGMRGCVSAGMIAAVSTL LMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQ IFR+MGLGL GTV TRW+G++ELVRQK GSPVL LNYLLHDVVE+QRPLDWE FW+KQ QPLHVIASG+ SKK VV++S GGHF TLRELTECMRASMLLPGITGPMVTLPN++E LVDSQLYE IPF+TAL+DGCTHVLV+RSRPDGGNLLGKPK+VERLI+RRFFKRK KDP+SY ++K+ GHK+LYAESVLTLNEA+ AK GD+GP +MP+CLPA EPEVGRLE+ R ILEGVRKGY HAH+LLRR P+HPTA +DGR+AAL AFP SIL EEMDP+VRE+L RS+
Sbjct: 1 MRTLLADGKSLFDLDARGDSQAMLEAREDEHPVIEVLRKRVKAGTKPGSHGDGLKVGLAIEGGGMRGCVSAGMIAAVSTLGLMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQ-------IFRSMGLGLFGTVVTRWRGIKELVRQKWGSPVLNLNYLLHDVVEKQRPLDWEKFWKKQPTQPLHVIASGVISKKAVVMTSKGGHFGTLRELTECMRASMLLPGITGPMVTLPNVDEPLVDSQLYEQIPFQTALDDGCTHVLVMRSRPDGGNLLGKPKIVERLIARRFFKRKSKDPDSYEFLKTSGHKKLYAESVLTLNEAAAAKSGDAGPFLMPMCLPAPEPEVGRLERDRAKILEGVRKGYHHAHLLLRRTAPEHPTATMDGRQAALTAFPDSILSEEMDPVVREILQRST 425
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: D7FS08_ECTSI (PNPLA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS08_ECTSI) HSP 1 Score: 439 bits (1128), Expect = 3.210e-143 Identity = 237/365 (64.93%), Postives = 260/365 (71.23%), Query Frame = 3
Query: 645 MRQRLSEGRSLFELDARGDSQEMLETRADEHPVLEVIRRRAKAGTKAGSHADGVK----------------------------------------------------------------------------MGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRWKGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTLPNINERLVDSQLYEPIPFRTALEDGCTHVLVVRSRPDG 1511
MR L++G+SLF+LDARGDSQ MLE R DEHPV+EV+R+R KAGTK GSH DG+K +GLAIEGGGMRGCVSAGMIAAVSTL LMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQ IFR+MGLGL GTV TRW+G++ELVRQK GSPVL LNYLLHDVVE+QRPLDWE FW+KQA QPLHVIASG+ SKK VV++S GGHF TLRELTECMRASMLLPGITGPMVTLPN++E LVDSQLYE IPF+TAL+D CTHVLV+RSRPDG
Sbjct: 1 MRTLLADGKSLFDLDARGDSQAMLEAREDEHPVVEVLRKRVKAGTKPGSHGDGLKKKGGIRGRRAEERGPFLGDGKIFFALDPRGDSPGILGGGGDDPPGVGVFRKRVKGGKNPGFPGGGLKQSEAMASAKVGLAIEGGGMRGCVSAGMIAAVSTLGLMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQ-------IFRSMGLGLFGTVVTRWRGIKELVRQKWGSPVLNLNYLLHDVVEKQRPLDWEGFWKKQATQPLHVIASGVTSKKAVVMTSKGGHFGTLRELTECMRASMLLPGITGPMVTLPNVDEPLVDSQLYEQIPFQTALDDECTHVLVMRSRPDG 358
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: A0A836CD71_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD71_9STRA) HSP 1 Score: 350 bits (898), Expect = 2.060e-109 Identity = 175/259 (67.57%), Postives = 210/259 (81.08%), Query Frame = 3
Query: 792 HADGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRWKGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTLPNINERLVDSQLYEPIPFRTALEDGCTHVLVVRSRPDGGNLLGKPKLVERLISRRFF 1568
HA V++GLAIEGGGMRGCVSAGM+A++ ++ MD DAVYGSSAGSLVGAYAIA Q GMPRLGCSVYYD LT GR FIDTR + RAMG+G L TR GLR+L R ++G+PV+KL+YLL DVVE RPLDWE FWE+Q +QP++++ASG+ S VVL+S GGHF+TLRELT CMRASMLLPGI GPMVTLP ++E LVDSQLYEPIP+R AL DGCTHV+V+RSRPDG +L+GKPKL ER+I++R+F
Sbjct: 99 HACSVQVGLAIEGGGMRGCVSAGMVASIMSVGAMDCVDAVYGSSAGSLVGAYAIAAQPGMPRLGCSVYYDALTNAGRSFIDTRF-------LGRAMGVGALAVPFTRRAGLRDLARDRIGAPVIKLDYLLGDVVERLRPLDWERFWERQRDQPMNIVASGMHSHSSVVLNSAGGHFKTLRELTACMRASMLLPGIAGPMVTLPGVDEPLVDSQLYEPIPYRAALNDGCTHVVVMRSRPDGCSLIGKPKLPERMIAKRYF 350
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: A0A8J5XH14_DIALT (PNPLA domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XH14_DIALT) HSP 1 Score: 318 bits (816), Expect = 8.950e-96 Identity = 195/423 (46.10%), Postives = 262/423 (61.94%), Query Frame = 3
Query: 681 ELDARGDSQEMLETRADEHPVLEVIRRRAKAGTKAGSHADGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRW-KGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTL---PNINERLVDSQLYEPIPFRTALEDGCTHVLVVRSRPDGGNLLGKPKLVERLISRRFFKRKHKDPESYAYVKSGGHKRLYAESVLTLNEASRAKGGDS--GPHV------------MPICLPASEPEVGRLEQRRESILEGVRKGYEHAHVLLRRAVPDHPTARLDGREAALRAFPQSILD 1895
+LD RGD+ +L R HPVL +R RA AG++ G+ ADG+++GLAIEGGGMRG V AGM+AA+ L L D FDAVYGSSAG+LVGAY I+ Q +PR G SVYY+ L G+ FI+ P+ Q+ R++GLG L T+W K R LG P L L++LL DV++ RPLDW +FW + A+ PL V+ASG+ +++P VL S F L EL C+RASMLLPGITGP + L +I+E L D+ L EPIP+R A+ +GCTHVLV+R++PDG + L E LI+RR+F RK K PE ++ KR YAE +L LNE +R + + G HV MP+ L E+GRLE R IL+ +++G+ A+ +L A H G E ALR FP +++D
Sbjct: 62 QLDVRGDTS-VLRERGSTHPVLAALRARAAAGSRPGARADGLRIGLAIEGGGMRGAVGAGMVAALHELGLGDAFDAVYGSSAGALVGAYFISQQ--LPRFGPSVYYECLGTAGKAFIN------PV-QLVRSVGLGALQL--TQWLKSPRS-----LGPPALNLDFLLVDVMQRDRPLDWPAFWARNAHTPLRVLASGLRTQRPFVLGSRERCFSNLPELATCLRASMLLPGITGPPIELRHASSIDEPLADAVLTEPIPYRAAVAEGCTHVLVLRTQPDGKRVSKHVSLGEALIARRYFGRKFKHPEMLRHMLLSQPKRTYAEDILLLNEGARGRVVEVPVGKHVPAGSAQTMGGFLMPVALAEGSSEMGRLETRPLPILQAIQRGFGAAYDVL--APSTHADGAPTGAEEALRVFPDALVD 465
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: L1JLD3_GUITC (PNPLA domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JLD3_GUITC) HSP 1 Score: 316 bits (810), Expect = 1.980e-95 Identity = 183/403 (45.41%), Postives = 249/403 (61.79%), Query Frame = 3
Query: 714 LETRADEHPVLEVIRRRAKAGTKAGSHADGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTG--TGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRW---KGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTLPNINERLVDSQLYEPIPFRTALEDGCTHVLVVRSRPDGGNLLGKPKLVERLISRRFFKRKHKDPESYAYVKSGGHKRLYAESVLTLNEASRAKGGDSGPHVMPICLPASEPEVGRLEQRRESILEGVRKGYEHAHVLLRRAVPDHPTARLDGR---EAALRAFPQSILDE 1898
L+ +A HPVL+V+ +R + +K G +DG K+ LAIEGGGMRGCV+AGM AAV D FDAVYGSSAGSL+GAY IA Q GMP+ GCS+YYD LT +FID R LP L+G RW + ++E + + P+L L YLL VEE RPLDWE+F +A PL ++AS ++ ++ VV GH+ +LRE+T CM ASM LP I P+VTLP ++ L D+QLYEPIPF++A+EDG THVLV+R+RPD +++ K +E + FF R+++ P Y Y+ + HK+ YA +L LN A+ D+ P ++ I L ++ E+GRLE RRE+I +GV GY A L P A +D R EA AFP +I++E
Sbjct: 23 LDKKATIHPVLQVLMQRRRESSKPGQRSDGFKVALAIEGGGMRGCVAAGMAAAVKDAGFHDCFDAVYGSSAGSLIGAYWIANQFGMPQYGCSLYYDLLTDERAKENFID-RSQILP-----------LIGLRWLRWLMPRSIKETLGMRARRPLLNLPYLLQTCVEELRPLDWEAFSRNEALVPLKIVASDVSKQRAVVFDREHGHWTSLREMTRCMTASMNLPAIAEPLVTLPGLDSLLADAQLYEPIPFKSAVEDGFTHVLVLRTRPDQQDVVPKKSKMEEKMMDHFFLRRYQLPHIYDYLVNQEHKKTYARDILALNHAAHHPPEDT-PQLLAIALGSNSSEIGRLECRREAIFQGVCDGYRSAWQALH-----PPAAGVDHRNPDEAVAAAFPHTIVEE 407
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: A0A0G4EEH5_VITBC (PNPLA domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EEH5_VITBC) HSP 1 Score: 319 bits (818), Expect = 1.230e-93 Identity = 198/482 (41.08%), Postives = 274/482 (56.85%), Query Frame = 3
Query: 618 RVRVTTVADMRQRLSEGRSLFELDARGDSQEM-------LETRADE---------HPVLEVIRRRAKAGTKAGSHADGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRWKGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTL--------------------------PNIN--ERLVDSQLYEPIPFRTALEDGCTHVLVVRSRPDGGNLLGKPKLVERLISRRFFKRKHKDPESYAYVKSGGHKRLYAESVLTLNEASRAKGGDSGP-HVMPICLPASEPEVGRLEQRRESILEGVRKGYEHAHVLLRRAVPDHPTARLDGREAALRAFPQSILDEEMDPLVREVL 1928
R+ V TV ++ + L G L LD RG + + + +AD HPVL+V+ +R G++ G DG ++ LAIEGGGMRGC+ AGM+ A+ L L D FD +YGSSAG+LVGAY I GQ +P G VYYD L G+ FI+T + + R++GLG LG W +R KLG PVL L+YLL DVV++ +PLDWE F +K+ +QPL ++ASG+ S++ VVL S+ G+F +L EL ECMRASMLLPGI GP+V L P + E + D+ LYEPIP+R+A+ + TH+LV+R+RPDG + G KL+E+LI RFFK K++ + Y Y+K GHK LYAE +L LN + G +GP H + I E+ R E RE+I +R G+ A+ +L V D P R G + A + P +ILD P+ +
Sbjct: 80 RLPVRTVEELHRYLDRGIKLPHLDIRGQTHLLPLPDKNPIINQADASAEVNCTGLHPVLQVLYKRRLEGSRPGQRTDGHQVALAIEGGGMRGCLGAGMVCALKQLNLTDCFDVIYGSSAGALVGAYFITGQ--VPYEGGQVYYDWLPAAGKDFINTAR-------VLRSVGLGPLGGDVWDW------LRDKLGKPVLNLDYLLRDVVQKYQPLDWERFRDKERHQPLKIVASGLVSRQAVVLDSHHGNFASLPELAECMRASMLLPGIAGPVVRLNSTGSNVLRVTGPAFDNGRMPRFGGEPTVESGEPMADALLYEPIPYRSAVRENATHILVLRTRPDGVKVTGAFKLIEKLIMARFFKAKNRMRDIYTYMKRLGHKVLYAEDILWLNNRTMDITGAAGPPHALAISPLPDRTEIARYEMSREAIFNALRDGFARAYDVL---VAD-PLERGRGAQVAKQVLPDAILDTAPAPVTHSLF 542
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: A0A7S2KR00_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KR00_9STRA) HSP 1 Score: 315 bits (808), Expect = 4.690e-93 Identity = 185/420 (44.05%), Postives = 255/420 (60.71%), Query Frame = 3
Query: 735 HPVLEVIRRRAKAGTKAGSHA----DGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRWKGLRELV-RQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQ-ANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVT------------LPNINER-----LVDSQLYEPIPFRTALEDGCTHVLVVRSRPDGGNLLGKPKLVERLISRRFFKRKHKDPESYAYVKSGGHKRLYAESVLTLNEASRAKGGD----SGPHVMPICLPASEPEVGRLEQRRESILEGVRKGYEHAHVLLRRAVPDHPTARLDGREAALRAFPQSILDEEMDPL 1913
HP L+VI R + G++ S + DG K+ L+IEGGGMRGCVSAGM+ A+ L L D FD VYGSSAGSL+GAY I Q +P G +YYD LT G+ FIDT K++ RA+G G+L V L++++ R K G PVL L++LL V+E++PLDW+ F EKQ QPL V+ASG+ S+K VV G F +L +L CM ASMLLPGI GP++ L N +++ L D+ +YEPIP+R+A+EDG THV+V+R+R DG ++ GK + ERLI RRFF RK++ P + Y++ HK+LYAE +L LNE ++ D S PH+ + L E+ RLE R +I EGVR+G+ A+ A+ + P R G + A FP IL+ + D +
Sbjct: 157 HPALQVIHERRRRGSQISSISPRPDDGFKVALSIEGGGMRGCVSAGMVGAIHYLGLDDAFDVVYGSSAGSLIGAYFITKQ--LPWFGPEIYYDALTTAGKKFIDT-------KRLLRAIGFGMLNPVL-----LKDVIFRPKNGKPVLDLSFLLRRTVQEKKPLDWDKFVEKQRGGQPLKVVASGLKSEKAVVFDMEKGDFTSLEQLANCMHASMLLPGIAGPIMNAYWSNEGPADLFLENNHKKKEVEPLADALVYEPIPYRSAVEDGATHVVVLRTRADGADVTGKSSIFERLIMRRFFVRKNRLPHIFRYMRKQYHKKLYAEDILVLNEKAKDLSRDFKDTSSPHIATVALSPGSEEITRLETSRRAIFEGVRRGFARAYD----ALVEDPAQRGMGAQVAKEYFPDEILNYDPDDI 558
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: A0A7S3L806_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L806_9STRA) HSP 1 Score: 311 bits (798), Expect = 4.680e-92 Identity = 189/435 (43.45%), Postives = 251/435 (57.70%), Query Frame = 3
Query: 735 HPVLEVIRRRAKAGTKAGSH--------ADGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRWKGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTLPNINER----------------------LVDSQLYEPIPFRTALEDGCTHVLVVRSRPDGGNLLGKPKLVERLISRRFFKRKHKDPESYAYVKSGGHKRLYAESVLTLNEASRAKGGD---SGPHVMPICLPASEPEVGRLEQRRESILEGVRKGYEHAHVLLRRAVPDHPTARLDGREAALRAFPQSILDEEMDPLVREVLGRSS 1940
HPV +V+++RA +DG ++ L +EGGGMRGCVSAGMI A+ L + FD YGSSAGS+VGAYAI Q + G VYYD+LT +GR FIDTR+ + RA+G GL+ + L R G PVL LNYLL ++E +PLDW++F E+Q QPL V+ASG+ S+K +V+S GHF TL E+ ECM AS LLPGI GP++ N+NE+ L D+ +YEP+P+RTA+++ CTHV+V+RSRPDG ++ GK E+LI RRFF RK+K P Y + HK+ YAE ++ LNE +++ S PH++ + P PEVGRLE RE I G R+G+ + L V D P R G E AL FP IL E DPL E S+
Sbjct: 121 HPVAQVLQKRAGQPRATPEDFDEWGRRKSDGCRIALVVEGGGMRGCVSAGMICALGYLNMTAAFDVYYGSSAGSIVGAYAITDQ--LQWSGPEVYYDSLTTSGRTFIDTRR-------LLRAIGFGLVDPRLYK----DVLTRPSNGKPVLNLNYLLKTTMQESKPLDWDTFVERQKVQPLKVVASGLKSEKAIVMSMATGHFSTLAEMAECMHASCLLPGIAGPLM---NLNEKALGTKSRKMYLGNNIHGEHIEPLADALIYEPLPYRTAVKENCTHVVVIRSRPDGADVTGKGSFFEKLIFRRFFLRKNKLPHIAEYFRKHLHKKRYAEDIIRLNEEAKSTRDPYDLSRPHILSVAAPPGSPEVGRLEVGREVIFAGFRRGFARCYDCL---VSD-PAERGRGMEVALEYFPDEIL--EYDPLDFEPSHESA 533
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: A0A4D9CRA8_9STRA (PNPLA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRA8_9STRA) HSP 1 Score: 306 bits (785), Expect = 6.980e-91 Identity = 188/412 (45.63%), Postives = 252/412 (61.17%), Query Frame = 3
Query: 621 VRVTTVADMRQRLSE--GRSLFELDARGDSQEMLETRA-----------DEHPVLEVIRRRAKAGTKAGSHADGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRWKGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTLPNINERLVDSQLYEPIPFRTALEDG--CTHVLVVRSRPDGGNLLGKPKLVERLISRRFFKRKHKDPESYAYVKSGGHKRLYAESVLTLNEASRAKGGDSGPHVMPICLPASEPEVGRLEQRRESILEGVRKGYEHAHVLL 1811
VRVT++ + Q LS G L +LD RGDS L + + HPV I R + + G+ DG+K+GL++EGGGMRGCV AGM+AA++ L L DTFD VYGSSAGSL+GAY ++GQ +P G +YYD L+ GR FID RQ I R++GLG L R + L+R++ G PVL L++LL V+E PL+W +FW +Q PL V+ S + S++PV LSS G+F+TL EL +CMRASMLLPGI GP+V I E + + L R +G CTHVLV+R+RPDG ++ GK L+E+L+ RRFF RK++ P ++ HKR+YAE VL LN+ +R G +M I L PE+ RLE RRE +LEGVR G+ A+ LL
Sbjct: 75 VRVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSPPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDTFDVVYGSSAGSLMGAYFLSGQ--IPLEGPGIYYDILSQAGRKFIDQRQ-------IMRSIGLGALDF---RRENYEALLRRQPGRPVLNLDFLLESVIENLMPLEWGTFWTRQEQIPLKVVVSALQSQQPVALSSADGNFQTLAELAQCMRASMLLPGIAGPLV---RIEETRMGTSLVGREEGREGGREGEECTHVLVLRTRPDGVSVTGKMSLIEKLMYRRFFSRKNELPGIAQWMTQQQHKRIYAEDVLRLNQEARDPGSTGPTPLMTIALREDMPEIHRLEMRREVLLEGVRNGFAVAYDLL 471
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Match: B7FYF6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYF6_PHATC) HSP 1 Score: 308 bits (790), Expect = 1.660e-90 Identity = 181/426 (42.49%), Postives = 246/426 (57.75%), Query Frame = 3
Query: 735 HPVLEVIRRRAKAGTKAGSHADGVKMGLAIEGGGMRGCVSAGMIAAVSTLELMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQDCLPIKQIFRAMGLGLLGTVATRWKGLRELVRQKLGSPVLKLNYLLHDVVEEQRPLDWESFWEKQANQPLHVIASGIASKKPVVLSSNGGHFRTLRELTECMRASMLLPGITGPMVTL-----------PNIN----------ERLVDSQLYEPIPFRTALEDGCTHVLVVRSRPDGGNLLGKPKLVERLISRRFFKRKHKDPESYAYVKSGGHKRLYAESVLTLNEASRAKGG---DSGPHVMPICLPASEPEVGRLEQRRESILEGVRKGYEHAHVLLRRAVPDHPTARLDGREAALRAFPQSILDEEMDPLVREVLGRSS 1940
HPV +++ R + GT G H DG K+ LA+EGGGMRGCV+AGMI A+ L L FD +YGSSAGS+ AY I GQ +P G VYYD LT G++FID LGLL + R+++ + G PVL L YLL V++ +PLDW+ F E+Q QPL+V+ SG+ S++ +VLS G F L ELT+CM AS LLPGI GP++ L P + E L D+ +YEP+P+R+A+ G THV+V+RSRPDG ++ GK + ER+I RRF RK++ P + + HK+LYAE V+ +NEA+ +K S PH++ + LP PEV RLE RE+I EG+R+G+ A+ L + P R G+ A FP ILD DPL RS+
Sbjct: 169 HPVAQLVHERQRRGTALGQHKDGCKLALAVEGGGMRGCVTAGMICALHHLNLTSVFDVIYGSSAGSITSAYFITGQ--LPWFGPEVYYDQLTTAGKNFIDR---------------LGLLDP-----RLYRDVITRPDGKPVLNLKYLLKTTVKDTKPLDWDKFLEQQTLQPLNVVTSGLKSQRSIVLSYENGGFENLNELTDCMHASCLLPGIAGPVMNLDMRSTSQRGKTPKLMLGNGRMEDYLEPLADALIYEPLPYRSAVAAGATHVVVLRSRPDGTDVTGKGGIFERMIFRRFLLRKNRLPHMFQRLSQQLHKKLYAEQVIEVNEAAYSKQDFKDTSNPHLLGVALPPGSPEVVRLETGREAIFEGIRRGFARAYDCL----VEDPKERGRGQIVAKEYFPDEILD--YDPLTISETDRSA 566 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11939.1491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11939.1491.1 >prot_H-elongata_contig11939.1491.1 ID=prot_H-elongata_contig11939.1491.1|Name=mRNA_H-elongata_contig11939.1491.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=626bp MAKHIYNSNREASRGETYGRDANMKDVATHEGNDSSRRNQDSDRITVVCSback to top mRNA from alignment at H-elongata_contig11939:225..6344- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11939.1491.1 ID=mRNA_H-elongata_contig11939.1491.1|Name=mRNA_H-elongata_contig11939.1491.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6120bp|location=Sequence derived from alignment at H-elongata_contig11939:225..6344- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11939:225..6344- >mRNA_H-elongata_contig11939.1491.1 ID=mRNA_H-elongata_contig11939.1491.1|Name=mRNA_H-elongata_contig11939.1491.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3756bp|location=Sequence derived from alignment at H-elongata_contig11939:225..6344- (Himanthalia elongata Himel1 dioecious)back to top |