mRNA_H-elongata_contig119293.1485.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: A0A6H5JJ18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ18_9PHAE) HSP 1 Score: 254 bits (648), Expect = 2.150e-77 Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 1
Query: 1 SQAMGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAKV 411
++AMG ETFIQP DII+ANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLA+DNGDLYINNLFADVQNG AILKVMDRIQPGVV WKRVNI PKNR+KKVENGNYVIDIAKV
Sbjct: 346 AKAMGAETFIQPADIINANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAIDNGDLYINNLFADVQNGSAILKVMDRIQPGVVVWKRVNIAPKNRFKKVENGNYVIDIAKV 482
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: D8LBI9_ECTSI (Fimbrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI9_ECTSI) HSP 1 Score: 254 bits (648), Expect = 4.420e-77 Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 1
Query: 1 SQAMGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAKV 411
++AMG ETFIQP DII+ANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLA+DNGDLYINNLFADVQNG AILKVMDRIQPGVV WKRVNI PKNR+KKVENGNYVIDIAKV
Sbjct: 399 AKAMGAETFIQPADIINANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAIDNGDLYINNLFADVQNGSAILKVMDRIQPGVVVWKRVNIAPKNRFKKVENGNYVIDIAKV 535
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: A0A836CF36_9STRA (Actin binding protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF36_9STRA) HSP 1 Score: 209 bits (533), Expect = 3.540e-62 Identity = 103/136 (75.74%), Postives = 119/136 (87.50%), Query Frame = 1
Query: 1 SQAMGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAK 408
++AMGVETFI+P DI+ NKKLLLAF AQLFNTNPNL VE EV++ FT +FANL+ DD GDTREEKVFRMW+NSL +D G LYI+NLF+DVQ+G AILKVMD IQPGVV WK+VN+ PKNRYKKVENGNYVI+IAK
Sbjct: 329 AKAMGVETFIRPTDIVSGNKKLLLAFVAQLFNTNPNLVVEAEVLQNFTANFANLDLDDAGDTREEKVFRMWMNSLGLDGGALYISNLFSDVQDGVAILKVMDAIQPGVVNWKKVNVAPKNRYKKVENGNYVIEIAK 464
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: A0A835YV37_9STRA (Actin bundling protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV37_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.320e-57 Identity = 96/136 (70.59%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 1 SQAMGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAK 408
+Q MGVETFI+P DI++ NKKLLLAF AQLFNTNP+L V+ EV+E+ T +FA L+ DD GDTREEKVFRMW+NSL +D G+LYI NLF+DVQ+G AI+ VMD IQPG+V+WKRVN PKNRYKK+ENGNYVI++AK
Sbjct: 333 AQRMGVETFIRPADIVNGNKKLLLAFVAQLFNTNPHLEVQAEVLEEVTANFAKLDIDDAGDTREEKVFRMWMNSLGLDGGNLYIGNLFSDVQDGVAIIAVMDTIQPGLVQWKRVNKEPKNRYKKLENGNYVIELAK 468
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: F0WEW9_9STRA (Fimbrinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEW9_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.980e-36 Identity = 73/136 (53.68%), Postives = 100/136 (73.53%), Query Frame = 1
Query: 1 SQAMGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAK 408
++ + VETFI+PHDI + N KL ++F AQLFNT P+L V + M++ E DD GDTREE+VFRMWINS+ +D L+IN+LF+DV++G A+LKV DRI+ GVV+W +V++N N Y+KVEN NY +DI K
Sbjct: 534 ARKLQVETFIKPHDITNGNPKLNMSFVAQLFNTCPSLDVVEADMKKLKEILY----DDVGDTREERVFRMWINSMGIDG--LHINHLFSDVRDGIALLKVFDRIEKGVVQWSKVHMNAPNTYQKVENCNYCVDIGK 663
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: A0A024GE37_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GE37_9STRA) HSP 1 Score: 140 bits (354), Expect = 4.040e-36 Identity = 73/133 (54.89%), Postives = 98/133 (73.68%), Query Frame = 1
Query: 10 MGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAK 408
+ VETFI+PHDI + N KL ++F AQLFNT P+L V + M++ E DD GDTREE+VFRMWINS+ +D L+IN+LF+DV++G A+LKV DRI+ GVV+W +V++N N Y+KVEN NY +DI K
Sbjct: 558 LQVETFIKPHDITNGNPKLNMSFVAQLFNTCPSLDVVEADMKKLNEILY----DDVGDTREERVFRMWINSMGIDG--LHINHLFSDVRDGIALLKVFDRIEKGVVQWSKVHMNAPNTYQKVENCNYCVDIGK 684
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: A0A812VU38_SYMMI (FIM3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VU38_SYMMI) HSP 1 Score: 134 bits (338), Expect = 7.620e-35 Identity = 71/133 (53.38%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 10 MGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAK 408
+G FI+ DI ANKKL L F A LFNT LT+ +E++ F DFA+L DD GDTREE+VFRMWINSL + +YI+NLF D+ +G+ IL++ D +QPGVV WK+ N +PK+ YKKVEN NY ++I +
Sbjct: 171 LGAYPFIRAEDICAANKKLNLGFVALLFNTCHGLTLSEEIIANF--DFASLTLDDAGDTREERVFRMWINSLNMPG--VYIHNLFDDLSDGFVILQLEDSVQPGVVNWKKANKDPKSVYKKVENCNYAVEIGR 299
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: H3GK74_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GK74_PHYRM) HSP 1 Score: 135 bits (339), Expect = 4.400e-34 Identity = 70/136 (51.47%), Postives = 99/136 (72.79%), Query Frame = 1
Query: 1 SQAMGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAK 408
++++ VETFI+P DI N KL ++F AQLFNT P L V +E ++Q E DD GDTREE+VFRMWINSLA+D D+YIN+L++D+ +G +LKV+D+IQ G+V WK+VN+ N++K+VEN NY + + K
Sbjct: 651 ARSLKVETFIKPRDITSGNPKLNMSFVAQLFNTCPALDVIEEEIKQLEEILY----DDVGDTREERVFRMWINSLAID--DVYINHLYSDLSDGMKLLKVLDKIQKGIVAWKKVNMVAPNKFKQVENCNYCVVLGK 780
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: A0A3R7JZ15_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JZ15_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.070e-33 Identity = 70/136 (51.47%), Postives = 97/136 (71.32%), Query Frame = 1
Query: 1 SQAMGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAK 408
++ + VETFI+P DI N KL ++F AQLFNT P L V +E ++Q E DD GDTREE+VFRMWINSLA+D DLYIN+L++D+ +G +LKV+D+IQ G+V W +VN+ N++K+VEN NY + + K
Sbjct: 368 ARRLTVETFIKPRDITSGNPKLNMSFVAQLFNTCPALDVVEEEIKQLEEILY----DDVGDTREERVFRMWINSLAID--DLYINHLYSDLSDGMKLLKVLDKIQKGIVSWNKVNMVALNKFKQVENCNYCVVLGK 497
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Match: A0A225WCG5_9STRA (Fimbrin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WCG5_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.120e-33 Identity = 70/136 (51.47%), Postives = 97/136 (71.32%), Query Frame = 1
Query: 1 SQAMGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANLEDDDEGDTREEKVFRMWINSLAVDNGDLYINNLFADVQNGYAILKVMDRIQPGVVRWKRVNINPKNRYKKVENGNYVIDIAK 408
++ + VETFI+P DI N KL ++F AQLFNT P L V +E ++Q E DD GDTREE+VFRMWINSLA+D D+YIN+L++D+ +G +LKVMD+IQ G+V W +VN+ N++K+VEN NY + + K
Sbjct: 649 ARRLEVETFIKPRDITSGNPKLNMSFVAQLFNTCPALDVVEEEIKQLEEILY----DDVGDTREERVFRMWINSLAID--DVYINHLYSDLSDGMKLLKVMDKIQKGIVSWNKVNMVAPNKFKQVENCNYCVVLGK 778 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119293.1485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig119293.1485.1 >prot_H-elongata_contig119293.1485.1 ID=prot_H-elongata_contig119293.1485.1|Name=mRNA_H-elongata_contig119293.1485.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp MGVETFIQPHDIIHANKKLLLAFCAQLFNTNPNLTVEQEVMEQFTEDFANback to top mRNA from alignment at H-elongata_contig119293:408..1953- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig119293.1485.1 ID=mRNA_H-elongata_contig119293.1485.1|Name=mRNA_H-elongata_contig119293.1485.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1546bp|location=Sequence derived from alignment at H-elongata_contig119293:408..1953- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig119293:408..1953- >mRNA_H-elongata_contig119293.1485.1 ID=mRNA_H-elongata_contig119293.1485.1|Name=mRNA_H-elongata_contig119293.1485.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig119293:408..1953- (Himanthalia elongata Himel1 dioecious)back to top |