mRNA_H-elongata_contig119152.1480.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig119152.1480.1
Unique NamemRNA_H-elongata_contig119152.1480.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: D8LIU7_ECTSI (ABC transporter family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU7_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 3.160e-62
Identity = 110/143 (76.92%), Postives = 119/143 (83.22%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETRGEARELRDRRRRQEEEGGVGAILDRNPNLK 429
            LGLVKPF +LLLD VTTSL DVVVRQDLL WL KES + GATIIYATHIFDGLD+WPTHLTYLTR    +GSTGWQGRLEDLELNRQMKERGETCTLLKVA +WLR EQEE R   +E  +RRR+ EE GG  AI +RNPNLK
Sbjct:   63 LGLVKPFKLLLLDEVTTSL-DVVVRQDLLHWLHKESVERGATIIYATHIFDGLDEWPTHLTYLTR----DGSTGWQGRLEDLELNRQMKERGETCTLLKVAVHWLRGEQEEYR---KETLERRRQVEESGGSDAIRNRNPNLK 197
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A6H5L275_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L275_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 2.900e-59
Identity = 110/143 (76.92%), Postives = 117/143 (81.82%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETRGEARELRDRRRRQEEEGGVGAILDRNPNLK 429
            LGLVKPF +LLLD VTTSL DVVVRQDLL WL KES   GATIIYATHIFDGLD+WPTHLTYLTR    +GSTGWQGRLEDLELNRQMKERGETCTLLKVA +WLR EQEE R   RE  + RR+ EE GG  AI +RNPNLK
Sbjct:  217 LGLVKPFKLLLLDEVTTSL-DVVVRQDLLHWLHKESVGRGATIIYATHIFDGLDEWPTHLTYLTR----DGSTGWQGRLEDLELNRQMKERGETCTLLKVAVHWLRGEQEEYR---RETLESRRQVEESGGSDAIRNRNPNLK 351
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A482S0N2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0N2_9ARCH)

HSP 1 Score: 141 bits (355), Expect = 3.810e-40
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEE 333
            +GL++PF ILLLD VT SL DVVVRQDLL WLR+ESE   ATI+YATHIFDGLDDWPTH+ YLT + R    TGWQGRLEDL+L R+M+ RGE   LL++A  WLRAE E+
Sbjct:   16 IGLLRPFKILLLDEVTVSL-DVVVRQDLLRWLRRESESRQATILYATHIFDGLDDWPTHVHYLTNKGR----TGWQGRLEDLQLYREMRGRGEPSPLLRIAETWLRAELED 121
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A835ZJB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJB2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.080e-39
Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAE 324
            LGLV+PF+ILLLD +TTSL DVVVRQDLL WLR+ESE  GATIIYATHIFDGLDDWP+HLTYLT     NG+TGWQGR+EDL+L R ++  G+   LL VAC WLR E
Sbjct:  161 LGLVRPFDILLLDEITTSL-DVVVRQDLLQWLRRESEVRGATIIYATHIFDGLDDWPSHLTYLTA----NGATGWQGRIEDLQLYRTLRAEGKPA-LLNVACTWLRDE 262
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A4D9D643_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D643_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.010e-36
Identity = 77/138 (55.80%), Postives = 99/138 (71.74%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETRGEARELRDRRRRQEEEGGVGAILDR 414
            LGLV+PF+ILLLD VT SL DVVVRQDLL WLR+E+E  GAT+IYATHIFDGLDDWP+HL ++T Q R    TGWQG+LEDLE  ++++  G+   LL++A  WLR E EE +        RR+ +E+E G   + D+
Sbjct:  171 LGLVRPFDILLLDEVTVSL-DVVVRQDLLRWLRRETEVRGATVIYATHIFDGLDDWPSHLHFMTNQGR----TGWQGKLEDLEHYQELRRAGDPGPLLRIAERWLRTETEEQK--------RRKLREKELGTQVLDDK 295
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A7S3PTX2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTX2_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.700e-35
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETR 339
            +GL++PF +LLLD +TTSL DV VRQDLL WL KE+E+ GATIIYATHIFDGLDDWPTHLTYLT     +G+TGWQG++++LE  +Q+K       +L VA +WLR E E  R
Sbjct:  174 IGLIRPFKVLLLDEITTSL-DVCVRQDLLGWLAKETEERGATIIYATHIFDGLDDWPTHLTYLTD----SGNTGWQGKMDELEYYQQLKADNHPAKMLAVADHWLRKELERNR 281
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A7S1DA85_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA85_CYCTE)

HSP 1 Score: 131 bits (329), Expect = 1.860e-35
Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETR 339
            LGL++PF +LLLD +TTSL DV VRQDLL WL +ESE+ GATI+YATHIFDGLDDW THL YLT     NGS GWQG++ DLE+ +++K+      +L +A +WLR E EE R
Sbjct:   56 LGLIRPFKLLLLDEITTSL-DVCVRQDLLRWLVRESEERGATIVYATHIFDGLDDWATHLFYLTN----NGSCGWQGKIGDLEVYQKLKQDNHPAKMLAIADHWLRKELEENR 163
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A8J2SKG5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKG5_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.910e-35
Identity = 67/108 (62.04%), Postives = 85/108 (78.70%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAE 324
            LGLV+PF+ILLLD VTT L DV+VRQDL+ WL+KE+E  GAT++YATHIFDGLDDWPTHL YL R    +G+TGWQG + +LEL  ++++ G    +LK+A  WLRAE
Sbjct:  196 LGLVRPFDILLLDEVTTCL-DVIVRQDLMRWLQKETETRGATVVYATHIFDGLDDWPTHLHYLNR----HGATGWQGPMGELELYSKLRKEGHPSPMLKIATTWLRAE 298
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A7R9YAI1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAI1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.190e-34
Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAE 324
            LGLV+PF +LL+D VT SL DVVVRQDLL+WLR+E E  G  +IYATHIFDGLDDWPTHL YLT +    G+TGWQG + +L++ R+++  GE   +L++AC WLR E
Sbjct:  171 LGLVRPFEVLLMDEVTVSL-DVVVRQDLLLWLRQECETRGCCVIYATHIFDGLDDWPTHLHYLTSE----GTTGWQGPIGELDIYRELRAAGEPSPMLRIACKWLRDE 273
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BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A1Z5J655_FISSO (CCR4-NOT complex subunit CAF16 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J655_FISSO)

HSP 1 Score: 131 bits (329), Expect = 3.160e-34
Identity = 68/113 (60.18%), Postives = 84/113 (74.34%), Query Frame = 1 
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETR 339
            LGL++PF ILLLD +TTSL DV VRQDLL WL +ESE+ GATIIYATHIFDGLDDW +HL YLT +    G  GWQG++E+LE+  ++K     C +L +A +WLRAE  E R
Sbjct:  182 LGLIRPFQILLLDEITTSL-DVCVRQDLLRWLVRESEERGATIIYATHIFDGLDDWASHLFYLTNK----GQCGWQGKMEELEVYHKLKAENHPCKMLAIADHWLRAELNENR 289
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIU7_ECTSI3.160e-6276.92ABC transporter family protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L275_9PHAE2.900e-5976.92ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A482S0N2_9ARCH3.810e-4067.57Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A835ZJB2_9STRA1.080e-3971.30P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9D643_9STRA2.010e-3655.80ABC transporter domain-containing protein n=2 Tax=... [more]
A0A7S3PTX2_9STRA1.700e-3561.06Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1DA85_CYCTE1.860e-3560.18Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J2SKG5_9STRA6.910e-3562.04Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9YAI1_9STRA1.190e-3460.19Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1Z5J655_FISSO3.160e-3460.18CCR4-NOT complex subunit CAF16 n=2 Tax=Fistulifera... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119152contigH-elongata_contig119152:2..1828 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score200.7
Seed ortholog evalue4.7e-49
Seed eggNOG ortholog2880.D8LIU7
Preferred nameCAF16
KEGG koko:K12608
KEGG Pathwayko03018,map03018
GOsGO:0000166,GO:0000288,GO:0000289,GO:0000956,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006368,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0030014,GO:0030015,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.ATPase activity
EggNOG OGsCOG4586@1,KOG2355@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionABC transporter family protein
Ec32 orthologEc-20_001610.1
Exons4
Model size429
Cds size429
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119152.1480.1prot_H-elongata_contig119152.1480.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig119152 2..1828 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929697.3591232-CDS-H-elongata_contig119152:1..591622929697.3591232-CDS-H-elongata_contig119152:1..59Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119152 2..59 +
1691679122.8413386-CDS-H-elongata_contig119152:1..591691679122.8413386-CDS-H-elongata_contig119152:1..59Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119152 2..59 +
1622929697.3764193-CDS-H-elongata_contig119152:823..9661622929697.3764193-CDS-H-elongata_contig119152:823..966Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119152 824..966 +
1691679122.8525908-CDS-H-elongata_contig119152:823..9661691679122.8525908-CDS-H-elongata_contig119152:823..966Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119152 824..966 +
1622929697.3890703-CDS-H-elongata_contig119152:1367..14361622929697.3890703-CDS-H-elongata_contig119152:1367..1436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119152 1368..1436 +
1691679122.8634558-CDS-H-elongata_contig119152:1367..14361691679122.8634558-CDS-H-elongata_contig119152:1367..1436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119152 1368..1436 +
1622929697.4044204-CDS-H-elongata_contig119152:1669..18281622929697.4044204-CDS-H-elongata_contig119152:1669..1828Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119152 1670..1828 +
1691679122.871724-CDS-H-elongata_contig119152:1669..18281691679122.871724-CDS-H-elongata_contig119152:1669..1828Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig119152 1670..1828 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig119152.1480.1

>prot_H-elongata_contig119152.1480.1 ID=prot_H-elongata_contig119152.1480.1|Name=mRNA_H-elongata_contig119152.1480.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIF
DGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKV
ACYWLRAEQEETRGEARELRDRRRRQEEEGGVGAILDRNPNLK
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mRNA from alignment at H-elongata_contig119152:2..1828+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig119152.1480.1 ID=mRNA_H-elongata_contig119152.1480.1|Name=mRNA_H-elongata_contig119152.1480.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1827bp|location=Sequence derived from alignment at H-elongata_contig119152:2..1828+ (Himanthalia elongata Himel1 dioecious)
CTCGGCCTCGTAAAGCCTTTCAATATCCTTCTCCTGGACGTGGTCACCAC
CAGCCTAGGTAGGTAGATAGGTGCGTGCTTTTGGCTTGTCCAGGAACACA
TTCACCCCGATGCCTCTCGTTCTCTGGTCTCGGGGACTCATGTAGCGAAA
AGCGAGAAGGCAGGCCCTAAATATCCGCCAATAACTCGTACAAATGACGC
TCCTTTCGCTACACAGGGGGGGTGGGGGGTGAGGAAGAGAGGGAACCGCT
CGCCACGTCTGTGCTTTTTTGGGAGCGCCGACCCCCATCACCTGAGAGAT
CCCCCCCCCCCCTCCCCCCCGCATATTGCTAGAAGCCTCCTTTCTAGCAC
CTTTGTTTGTTCCCCTCGTATCTATTACCGTTGTATTAACCCTTTTGGAA
CTGGATTTCAAGTTTTATATTGAATTTAGTATAGAAAAAAAACAGACCGA
GTTCCATAGGGGTTAAAACGAGAGAGAGCATGGTCTAGGACTGAAGCGAG
AAAAATGGAAAGTTGGGACGAAAAGGCGTCTGAAGCCTGTGGGTCAGCTA
GAAGGGAGGAGGTGGCGGCTTAACTGGGGGGAAATAAATGGCCTGGGACG
GGCGAAAACGGATGTGTACCGTAGACACGATATTACTTAAGATTTTTGCG
CCGCCTTTGTCAAAGTAGGAAAGGAAATATTGGCCATAAGCGATCGATCC
TGCCGAGAATGCATGGTCAGCGATCTAACAGTTAAGGCATACAAAACCTC
GTCTCATCTCGGGGTATTTTGACGTGCACGCATTGCGGCGGGTGGGCTGA
ACGGCCATGTCGGGCGGACGAGCAGACGTGGTGGTTCGGCAGGATCTACT
GGTGTGGCTTCGCAAGGAAAGCGAGCAGGGAGGGGCCACCATTATCTACG
CCACCCACATCTTCGATGGACTCGACGACTGGCCGACGCACCTTACGTAC
CTCACGAGGCAAGCAGTTCCCACCCTCTCCTCCGTTAACTCACCCCAACC
AGTCACTCCCGGTTCAAGCCTTTCTCTCCTGTGCACGGTTGGTTTACAAC
GCCTGCGGGGCGACTCTATTATTATTCACGACGAGCTCCTTCCCTCTCCC
TGTGACCACTCGGGTGTCAGTAGGTGTACAGTGTGGGCGTTTGACCGGCG
GGTCCTTGGAGGGCCTACCAACATCGTGCAGCGAGGGTGCACTTGAAACG
GGCCACCCCTATTTAATCGCACGGGGCAACCTCCTCTATACACTTACACG
ATAAAGTTCTAGTTGGCTAGTTGGCAGTTGTTCTGTTCCCCCCGCCTCAT
TCGTCCATCCATATTTTTCGTCGCCCCCTTAATCCATGACTGCCACCGTC
TGAACTGCCCTGAAAGCGTAGGAACGGCAGCACCGGCTGGCAGGGAAGGC
TAGAGGACCTGGAGTTGAATCGCCAGATGAAGGAGGTAAGCCTGAAGGCG
AAACATCGCCGTCGTGTTGTCAAGGTCCCCTGGTAACAGGGCTATTGGAA
ACCTTGTGATTGGCGTTAACAACAAGGAGTCTCAGTTGCATTTTTCTGGC
TACCCTTGAACGGGGGGAGAGAGGGTTCTGAAGCACCAGGTGTCCCCATT
TTCGTCTCATGTTCTTCTTCTCCTCCTCTTATGTTGCTTGCTTGCTTGCT
TGACAACATCGTTTGCAGAGGGGCGAGACCTGCACGTTGCTGAAGGTGGC
CTGCTACTGGCTGCGGGCTGAGCAGGAGGAAACCCGAGGCGAGGCCAGGG
AGCTGAGGGATCGAAGGCGGCGGCAGGAGGAAGAGGGGGGCGTCGGAGCG
ATACTCGACCGCAATCCCAACTTGAAG
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Coding sequence (CDS) from alignment at H-elongata_contig119152:2..1828+

>mRNA_H-elongata_contig119152.1480.1 ID=mRNA_H-elongata_contig119152.1480.1|Name=mRNA_H-elongata_contig119152.1480.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=858bp|location=Sequence derived from alignment at H-elongata_contig119152:2..1828+ (Himanthalia elongata Himel1 dioecious)
CTCGGCCTCGTAAAGCCTTTCAATATCCTTCTCCTGGACGTGGTCACCAC
CAGCCTAGCTCGGCCTCGTAAAGCCTTTCAATATCCTTCTCCTGGACGTG
GTCACCACCAGCCTAGCAGACGTGGTGGTTCGGCAGGATCTACTGGTGTG
GCTTCGCAAGGAAAGCGAGCAGGGAGGGGCCACCATTATCTACGCCACCC
ACATCTTCGATGGACTCGACGACTGGCCGACGCACCTTACGTACCTCACG
AGGCAAGCACAGACGTGGTGGTTCGGCAGGATCTACTGGTGTGGCTTCGC
AAGGAAAGCGAGCAGGGAGGGGCCACCATTATCTACGCCACCCACATCTT
CGATGGACTCGACGACTGGCCGACGCACCTTACGTACCTCACGAGGCAAG
CACGTAGGAACGGCAGCACCGGCTGGCAGGGAAGGCTAGAGGACCTGGAG
TTGAATCGCCAGATGAAGGAGCGTAGGAACGGCAGCACCGGCTGGCAGGG
AAGGCTAGAGGACCTGGAGTTGAATCGCCAGATGAAGGAGAGGGGCGAGA
CCTGCACGTTGCTGAAGGTGGCCTGCTACTGGCTGCGGGCTGAGCAGGAG
GAAACCCGAGGCGAGGCCAGGGAGCTGAGGGATCGAAGGCGGCGGCAGGA
GGAAGAGGGGGGCGTCGGAGCGATACTCGACCGCAATCCCAACTTGAAGA
GGGGCGAGACCTGCACGTTGCTGAAGGTGGCCTGCTACTGGCTGCGGGCT
GAGCAGGAGGAAACCCGAGGCGAGGCCAGGGAGCTGAGGGATCGAAGGCG
GCGGCAGGAGGAAGAGGGGGGCGTCGGAGCGATACTCGACCGCAATCCCA
ACTTGAAG
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