mRNA_H-elongata_contig119.1471.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 430 bits (1106), Expect = 5.720e-132 Identity = 254/544 (46.69%), Postives = 328/544 (60.29%), Query Frame = 1
Query: 7 PDEFLETLVSHGPAMFMKVEEEVAATHEALVSALRAAVETGFPEEYVAELEEIILGECFDAFRRALT-GEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPKGPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAESVVPLRALMELRLMST-SRTKRVTPRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRALMFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLC-WPTVDKEPFAILSAFQRVP---------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
PD +E LV+ GP M M EEE +A +L SA+ +A G E +V L II E ++AFRR L G+PPA V P+RVTLK GA R VKA+PRVY P K+A L G+V+ N QAV AS AMA PK GY LV+DF N Q VPG M NPE + + A + ++D LQ YWQCPLA E +E FT T GL+T RVPQG++NATSYFQ + +L L C ++VDDV G ++L+ L +L R GL++AAHK F T + WCGK+YS V +DPER+ GL MRR ET GEL++ LQA NW+R SL MAE V PLR +E L+ SRTKRV A+ TP VEAW +++++ V LS P C LMFP+ASD W LTQVP+++L G+ DM+HEP+ FL+G F+G+Q W TVDKE +AI+S F+R+ LAYIF P++ ++K +QRL W+A + Q++Y I+HI GE N WGDLLSRW
Sbjct: 681 PDPAVERLVARGPDMDMSPEEEASARSASLDSAVSSAAAAGLEEPHVGRLRGII-SERWNAFRRGLRHGDPPANVEPLRVTLKPGA--RPVKARPRVYNPIKTA-------WLAGLGLVFLNMQAVWASAAMATPK--KGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGL---NCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPG-CAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRW 1208
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 428 bits (1100), Expect = 1.870e-131 Identity = 240/544 (44.12%), Postives = 323/544 (59.38%), Query Frame = 1
Query: 7 PDEFLETLVSHGPAMFMKVEEEVAATHEALVSALRAAVETGFPEEYVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPKGPGKG--YHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAESVVPLRALMELRLMST-SRTKRVTPRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRALMFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVP---------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
PD +E LV+ GP M M EE A +AL A+ +A + G + L +++ F+ FRR + G+PPA V PM V LK GA + VKA+ R Y P+K+ L L G+VY N QA+ AS M PK G Y V DF +N Q PGPM + E + ++ + A + ++D LQGYW PLA E +E FT + GL++ RVPQGV+NATSY+QG M +L DL C+++VDD+ G + E+L+ L +L RF GLF+AAHK + T VKWCGK+YS + +D +R+ GL +RR ET GEL++ LQA NW+R SL M+E V PLR +EL + +RTKRV A+ WTP VE+W+ +++M+ N V L + LMFP+ASD W +TQVP+ E+ + DMSHEPL FL+G FRGSQL W TVDKE FAI+S F+R+ LAYIF P++ T+ K +QRL W+A + Q++Y IQHI GE N WGDLLSRW
Sbjct: 573 PDAAVERLVARGPDMVMTPAEEEAGRADALDRAVDSAADAGLSPWGLDRLRQVV-DRRFNVFRRGVRGDPPANVPPMTVKLKTGA--KPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL---NCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTL-YHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRW 1109
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A6A3I3R6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I3R6_9STRA) HSP 1 Score: 291 bits (746), Expect = 1.320e-84 Identity = 174/490 (35.51%), Postives = 255/490 (52.04%), Query Frame = 1
Query: 184 DAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPK-----GPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAE-SVVPLRALMELRLMSTSRTKRVTPRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRALMFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVP-----------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
D FR +PP RV P++V LK G +R VKA+PR Y P L H L + G+VY N ++ AS K P + D +N + +P PM E+ + GA F +D +GYWQ PL + +E F+FVT G++T TRVP G +A +Y QG++ E+ GDL+G L ++DD+ + EEL+ L V +R + GL L A K + FATEVKWCG++ S V++ PER++GLV+M+ T GEL + + A NWMR S+ + S AL ++ SR + + L W +++ R L+ V L+ RP ++ +AS W LTQ+ E A L + H+PLAFL+G F G+ W T++KE FAI+ A +R+ L YIF+P + +++ + +L W + F YVI+H+PGE+N WGDLLSRW
Sbjct: 20 DCFRVEFGNDPPVRVVPLKVRLKDG--VRPVKAQPRRYSPTDREFLDRHTRALLDNGLVYLNHRSCWASAPNIVRKKEQDVDPSADPRMTIDSRGVNERTEAMPWPMPVLEVVIGELEGAKYFFVLDWFRGYWQLPLHPDSQELFSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGQGLLCWLDDILGYAETEEELLALLEKVSVRCEKFGLKLHAKKCLFFATEVKWCGRIISAEGVKHCPERIQGLVDMQPPRTAGELQQFVCAANWMRQSIPEYSRLSAALYEALERAAQVAGSRKQNKLAKVRLDEVGWHDTEASSFEAVRAALLRMVPLAHPRPT-AEVCLYTDASQDFWGAVLTQLKPGE--AELPLTEQQHQPLAFLSGRFVGASSRWSTIEKEAFAIVEATRRLEYLLLRPAGFRLYTDHRNLVYIFNPYATDGAMARYRADKLQRWALSLMSFKYVIEHVPGEENVWGDLLSRW 504
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A6G0WP68_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP68_9STRA) HSP 1 Score: 288 bits (736), Expect = 7.760e-83 Identity = 184/519 (35.45%), Postives = 271/519 (52.22%), Query Frame = 1
Query: 88 EALVSALRAAVETGFPEEYVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPK-GPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAESVVPLRALMELRL-MSTSRTKRVTPRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRAL-MFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVP-----------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
E L + AVE G P V EL I L D FR +PP +VAP++V LK+GA VK R YPP L++H L G++Y N +A A+ PK PG+ Y + + PIN +P PM N E G F T+D L+GYWQ PL E + +++F+T G++T T++ G +A ++ Q ++ E+ GDL+ L ++DD+ RS E+L+V L VL E L + K + E KWCGK+ S + +DP RV+ L EM+ T EL + L ATNWMR S+ A+ V PLR L+++ ++ S K + L WT E E ++ + L V L+ P + +A+ +F +AS W TQVPKE+L L+ HEPLAFL+G F G+ WP ++KE +A++ + +R+ L YIF+P+ Y +++ + +L W M+ F Y ++H+ GE N WGDLLSRW
Sbjct: 543 EVLEQKVAEAVEQGLPPGQVDELRRI-LRAYQDVFRLDFGKDPPVKVAPLKVRLKEGAV--PVKVGLRRYPPAHMDYLRQHVAELEAAGLIYRNNRATWAAAPRIVPKKNPGE-YRMTIESRPINAWTETMPWPMPNLEAAMATLVGMEVFFTLDWLKGYWQLPLHPECQMWYSFMTPFGVYTPTKILMGQTDAVAFCQSVVNELFGDLMYQGVLGWLDDLLGYARSAEQLLVLLEKVLHICQEYRLKMHPKKCDFYLKEAKWCGKVISSEGISHDPSRVQRLCEMKAPTTAAELQQFLCATNWMRASIPLYAQRVDPLRRLLDVATKIAGSAKKTALAKADLAVARWTAEHDECFEEVKATLARMVPLA--HPSEDKAICLFTDASADHWGAACTQVPKEDLE--LTVDKERHEPLAFLSGSFTGASSRWPVIEKEAYAVVESCKRLEYLLLRQQGFRLFTDHRNLLYIFNPRGYDSGMARYQAHKLQRWAMVMATFPYTLEHVAGEANVWGDLLSRW 1053
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A6G0WYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYM7_9STRA) HSP 1 Score: 290 bits (741), Expect = 8.890e-83 Identity = 186/519 (35.84%), Postives = 270/519 (52.02%), Query Frame = 1
Query: 88 EALVSALRAAVETGFPEEYVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPK-GPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAESVVPLRALMELRL-MSTSRTKRVTPRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRAL-MFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVP-----------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
E L + AVE G P V EL I L D FR +PP +VAP++V LK+GA VK R YPP L++H L G++Y N +A A+ PK PG+ Y + D PIN +P PM N E G F T+D L+GYWQ PL E + +++F+T G++T TR+ G +A ++ Q ++ E+ GDL+ L ++DD+ RS E+L+V L VL E L L K + E KWCGK+ S + +DP RV+GL EM+ T EL + L ATNWMR S+ A+ V PLR L+++ ++ S K + L WT E E ++ + L V L+ P + +A+ +F +AS W TQVPK +L L+ HE LAFL+G F G+ WP ++KE +A++ + +R+ L YIF+P+ Y +++ + +L W M+ F Y ++H+ GE N WGDLLSRW
Sbjct: 42 EVLEQKVAEAVEQGLPPGQVDELRRI-LRAYQDVFRLDFGKDPPVKVAPLKVRLKEGAV--PVKVGLRRYPPAHMDYLRQHVAELEAAGLIYRNNRATWAAAPRIVPKKNPGE-YRMTIDSRPINAWTEAMPWPMPNLEAAMATLVGMEVFFTLDWLKGYWQLPLHPECQMWYSFMTPFGVYTPTRILMGQTDAVAFCQSVVNELFGDLMYQGVLGWLDDLLGYARSAEQLLVLLEKVLHICQEYRLKLHPKKCDFYLKEAKWCGKVISSEGISHDPSRVQGLCEMKAPTTAAELQQFLCATNWMRASIPLYAQRVDPLRRLLDVATKIAGSAKKTALAKVDLAVAGWTAEHDECFEEVKATLARMVPLA--HPSEDKAICLFTDASADHWGAACTQVPKVDLE--LTVDKQRHESLAFLSGSFTGASSRWPVIEKEAYAVVESCKRLEYLLLRQQGFRLFTDHRNLLYIFNPRGYDSGMARYQAHKLQRWAMVMATFPYTLEHVAGEANVWGDLLSRW 552
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA) HSP 1 Score: 286 bits (732), Expect = 1.030e-82 Identity = 183/534 (34.27%), Postives = 269/534 (50.37%), Query Frame = 1
Query: 1 NLPDEFLETLVSHGPAMFMKVEEEVAATHEALVSALRAAVETGFPEEYVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPK-----GPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAESVVPLRALMELRLMSTSRTKRVT-PRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRALMFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVPLAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
NL + + +S A + + + H+ L S L AA G + V L EI+L D+FR +PP +VAP++V +K A + KA+PR Y A L H L E G+V N ++ AS K P + D +N + +P PM E+ GA F +D +GYWQ PL ++ +E FTF+T G++T TRVP G +A +Y QG++ E+ GDL+G+ L+++DD+ S EEL+ L VL R GL L A K F EVKWCGK+ S VR+ P+RV+GLVEM+ +T G+L + L A NWMR S+ L A++E + + K+V ++ L W ++ + +L+ V L+ P ++ +AS W TQ+ E+ L H PLAFL+G F G+ WPT++KE +A L YIF+P +++ + +L W + F YVI+H+PGE N WGDLLSRW
Sbjct: 365 NLTPAYWQLPLSSSGAQVLAFQTRDGSVHDMLDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAPLQVRVKVNA--QPTKAQPRRYSSNDKAFLDRHTAKLQEFGLVSLNHRSRWASAPRIVRKKEQGSDPTADPRMTIDTRGVNERTEAMPWPMPVLEVVLSALEGAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILVWLDDILGYAESEEELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVRHYPDRVQGLVEMQPSQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLHAVLEEAMKAAGSRKKVKLAKFPLDKIGWGDPQLADLAAVKAVLLEMVPLAHPSPT-AEVCLYTDASQDSWGAVATQLEPGEVQLPLE--QQHHRPLAFLSGRFVGASSRWPTIEKEAYAR-------NLVYIFAPYGSDTAMARCQADKLRRWALSLLSFTYVIEHVPGETNVWGDLLSRW 885
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A6A3ME06_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3ME06_9STRA) HSP 1 Score: 287 bits (735), Expect = 1.010e-81 Identity = 171/490 (34.90%), Postives = 255/490 (52.04%), Query Frame = 1
Query: 184 DAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPK-----GPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAE-SVVPLRALMELRLMSTSRTKRVTPRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRALMFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVP-----------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
D FR +PP RV P++V LK G +R VK + R Y P L H L + G+VY N ++ AS K P + D +N + +P PM E+ + GA F +D +GYWQ PL + +E F+FVT G++T TRVP G +A ++ QG++ E+ GDL+G L ++DD+ + EEL+ L VL R + GL L A K + FATEVKWCG++ S V++ PER++GLV+M+ T GEL + + A NWMR S+ + S AL ++ SR ++ + L W +++ R L+ V L+ RP ++ +AS W +TQ+ E A L ++ H+PLAFL+G F G+ CW T++KE FAI+ A +R+ L YIF+P + +++ + +L W + F YVI+H+PGE+N WGDLLS W
Sbjct: 308 DCFRVEFGNDPPVRVVPLKVRLKDG--VRPVKTQTRRYSPTDREFLDRHTRALLDNGLVYLNHRSCWASAPNIVRKKEQDVDPSADPRMTIDSRGVNERTEAMPWPMPVLEVVIGELEGAKYFFVLDWFRGYWQLPLHPDSQELFSFVTHRGIYTPTRVPMGATDAVAFCQGVVEEIFGDLLGQGLLCWLDDIIGYAETEEELLALLEKVLERREKFGLKLHAKKYLFFATEVKWCGRIISAEGVKHCPERIQGLVDMQPPRTAGELQQFVCAANWMRQSIPEYSRLSAALYEALERAAQVAGSRKQKKMAKVRLDEVGWHDTEASSFEAVRAALLRMVPLAHPRPT-AEVCLYTDASQDFWGAVVTQLKPGE--AELPLIEQQHQPLAFLSGRFVGASSCWSTIEKEAFAIVEATRRLEYLLLRPAGFRLYTDHRNLVYIFNPYATDGAMARYRADKLQRWALLLMSFKYVIEHVPGEENVWGDLLSCW 792
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM) HSP 1 Score: 286 bits (731), Expect = 7.020e-81 Identity = 184/522 (35.25%), Postives = 269/522 (51.53%), Query Frame = 1
Query: 94 LVSALRAAVETGFPEEYVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPK-----GPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAE-SVVPLRALMELRLMSTSRTKRVTPRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRP--DDCRALMFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVP-----------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
L S + A G + A+L I+ D+FR +PP RVAPM+V LK GA ++A+PR Y P A L H L + G+++ N ++ AS K P + D +N + +P PM E+ + GA F +D +GYWQ PL + +E ++FVT G++T TRVP G +A +Y QG++ E+ GDL+G L ++DD+ L+ L VL R + GL L A K FATEVKWCG++ S VR+ PER++GLVEM+ +T G+L + L A NWMR S+ + V AL ++ SR K R L W + + + R+ L+N V L+ P D C ++ +AS+ W +T + EEL L + H PLAFL+G F G+ WPT++KE FAI+ A +R+ L YIF+P + +++ + +L W + F YVI+H+PGE+N WGDLLSRW
Sbjct: 614 LESKVEIATRMGLTLDGSAKLRGILQMRA-DSFRLEFGHDPPVRVAPMQVRLKPGAT--PIRAQPRRYSPNDRAFLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKEQADDPLADPRMTIDTRSVNERTEPMPWPMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVRHCPERIQGLVEMQAPQTAGDLQQFLCAVNWMRQSIPEFTRITAVLYDALDRAAQIAGSRKKVKLARVRLEDVSWGADEMAGVEAVRDALLNMVPLAHPSPTADLC---LYSDASNDYWGAVVTMLDPEELK--LPRAEQHHRPLAFLSGRFVGAAQRWPTIEKEAFAIVEAVRRLEYLLLRPRGFHLFTDHRNLVYIFNPYATDGMMARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRW 1127
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA) HSP 1 Score: 280 bits (717), Expect = 2.510e-80 Identity = 181/526 (34.41%), Postives = 265/526 (50.38%), Query Frame = 1
Query: 76 AATHEALVSALRAAVETGFPEEYVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPK-----GPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAESVVPLRALMELRLMSTSRTKRVT-PRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRALMFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVP-----------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
+A H+ L S L AA G V L EI+L D+FR +PP +VAP++V +K A + KA+PR Y P+ A L H L E G+V+ N ++ AS K P + D +N + +P PM E+ GA F +D +GYWQ PL ++ +E FTF+T G++T TRVP G +A +Y QG++ E+ GD +G+ L ++DD+ S +EL+ L VL R GL L A K F EVKWCGK+ S VR+ P+R +GLVEM+ +T G+L + L A NWMR S+ L A++E + + K+V ++ L W ++ + L+ V L+ P ++ +AS W TQ+ E+ L H PLAFL+G F G+ WPT++KE +AI+ A +R+ L YIF+P +++ + +L W + F YVI+H+PGE N WGDLLSRW
Sbjct: 298 SAVHDMLDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNA--QPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTAGLYAVLEEAMKAAGSRKKVKLAKFPLDQIGWGDPQLADLAAVKAALLKMVPLAHPSPT-AAVCLYTDASQDSWGAVATQLEPGEVQLPLE--QQHHHPLAFLSGRFVGTSSRWPTIEKEAYAIVEATRRLEYLLLRPGGFRLYTDHRNLVYIFAPYGPDTAMARYQADKLQRWALSLLSFTYVIEHVPGEANVWGDLLSRW 817
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Match: A0A6A3DJI3_9STRA (Reverse transcriptase domain-containing protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DJI3_9STRA) HSP 1 Score: 275 bits (702), Expect = 6.370e-80 Identity = 178/545 (32.66%), Postives = 266/545 (48.81%), Query Frame = 1
Query: 43 PAMFMKVEEEVAATHEALVSALRAAVETGFPEEYVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLRQVKAKPRVYPPEKSA*LKEHFELLCETGMVYPNPQAVCASVAMAFPK-----GPGKGYHLVADFSPINGQCGLVPGPMVNPEIEGKKYAGAVAFCTMDCLQGYWQCPLAKEVREYFTFVTRDGLFTQTRVPQGVMNATSYFQGMMREVLGDLVGHACLIYVDDVKVIGRSFEELIVNLRSVLLRFMERGLFLAAHKLVLFATEVKWCGKLYSGTAVRNDPERVRGLVEMRRQETVGELIKVLQATNWMRLSLLHMAESVVPLRALMELRLMST---------SRTKRVTPRWALTHCDWTPERVEAWDNSREMLMNTVELSFRRPDDCRALMFPNASDLVWWCCLTQVPKEELVAGLSFMDMSHEPLAFLNGVFRGSQLCWPTVDKEPFAILSAFQRVP-----------------LAYIFSPQSYGVTLSKAASQRLAGWRACMSQFNYVIQHIPGEDNHWGDLLSRW 1584
PA +E++ L R A G E L EI+ D+FR +PP +VAP++V +K GA KA R PP L+ H L +G+VY NP++ AS K P + D +N + +P PM EI + GA F ++D +GYWQ PL + +E+F F+T G++T TRVP G ++ +Y Q ++ E+ GDL+G+ ++DD+ + E L+V L VL R + GL L A K +ATE++WCGK+ S VR+ P+R++GLV+M T +L + L A NWMR +P L+ RL +T +R K + L W E A + R L+ V L+ + ++ +AS W LTQ+ EEL L + H PLAF++G F G+ W T++KE FAI+ + +R+ L YIF+P T+++ + +L W ++ F YVI+H+PG+ N WGDLLSRW
Sbjct: 108 PATPTMTKEDLDGVIATLEKRARDAASAGLGEALQPRLREILYVR-LDSFRLEFGNDPPVKVAPLQVRIKPGAV--PTKAYARRAPPLDREFLERHVGKLLASGLVYRNPRSRWASAPRIVRKKEQDTDPTADPRMTIDTRSVNDKTDAMPWPMPILEIIIGELEGATVFFSLDWFRGYWQLPLHPDSQEFFIFITHRGMYTPTRVPMGAKDSVAYCQAVVEEIFGDLIGNGIYCWLDDILGDAKDAECLMVLLDQVLERCEKYGLKLHAKKCRFYATEIQWCGKMISANGVRHCPDRIQGLVDMPMPRTAADLQQFLCAVNWMR--------QCIPTYNLLTQRLYATLENAMQLAGTRKKTKLSKCLLADAGWGVEDEGALEAVRAALLKMVPLAHPNQQE-EVCLYTDASQDSWGAVLTQLRPEELQLPLE--EQQHRPLAFVSGRFVGASSRWATIEKEAFAIVESTRRLEYLLLRPKGFRLYTDHRNLVYIFNPYGVDSTMARYQADKLQRWSISLTAFRYVIEHVPGDQNEWGDLLSRW 638 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119.1471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig119.1471.1 >prot_H-elongata_contig119.1471.1 ID=prot_H-elongata_contig119.1471.1|Name=mRNA_H-elongata_contig119.1471.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=410bp MVYPNPQAVCASVAMAFPKGPGKGYHLVADFSPINGQCGLVPGPMVNPEIback to top mRNA from alignment at H-elongata_contig119:20497..22125- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig119.1471.1 ID=mRNA_H-elongata_contig119.1471.1|Name=mRNA_H-elongata_contig119.1471.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1629bp|location=Sequence derived from alignment at H-elongata_contig119:20497..22125- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig119:20497..22125- >mRNA_H-elongata_contig119.1471.1 ID=mRNA_H-elongata_contig119.1471.1|Name=mRNA_H-elongata_contig119.1471.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2460bp|location=Sequence derived from alignment at H-elongata_contig119:20497..22125- (Himanthalia elongata Himel1 dioecious)back to top |