mRNA_H-elongata_contig11888.1461.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A6H5J8W5_9PHAE (SAM-dependent MTase TRM10-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J8W5_9PHAE) HSP 1 Score: 315 bits (806), Expect = 2.160e-99 Identity = 164/272 (60.29%), Postives = 206/272 (75.74%), Query Frame = 1
Query: 1 EQTTKRLGRKTGRSAASKRSRSKRRERRARIVEEFGVEELKKIILKERRDKEEQLGRLKAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVAHGIRRPRGGAWRG----AAPSNGSGWG 804
++ ++R GRK GR+A SKR+RSKR++ ++ E G++E KK++LK + +KEEQ R++ AMDDP SL+LV+DL+WAE A GKELSSL KQLCYVY+R KAS PP LTLTSY+G+ AA L++ GA SWL R PL VF VFD T ++YLSPDAEEPL++V+ T+VYV+GGIVDRNL KG+T AA+ +AR ARLPFD+YLPE+ DRVLTVCACVGVL+ V AGE WR AL++SVP R V RR RG AWRG A + SGWG
Sbjct: 38 KRNSRRQGRKRGRAATSKRTRSKRKQNAEMLINEIGIDEFKKMVLKGKLEKEEQQERMRRAMDDPDSLRLVIDLNWAES-APGKELSSLVKQLCYVYSRAKASSMPPRLTLTSYQGKVAAALESAGADSWLVDRNPLGVFTVFDPTEIIYLSPDAEEPLDQVLDTNVYVVGGIVDRNLRKGLTLGAADGARARAARLPFDEYLPEIPRGDRVLTVCACVGVLMGVRAGEGWRDALQKSVPRRGVEKAARRARGRAWRGTVAEAVGAGQSGWG 308
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A4D9D7D2_9STRA (tRNA (guanine(9)-N(1))-methyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7D2_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.160e-22 Identity = 70/208 (33.65%), Postives = 114/208 (54.81%), Query Frame = 1
Query: 193 PCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASIT---PPVLTLTSYRGRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVV-ATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGE-NWRAALEQSVPHRRVAHGIR----RPRGGAWRGAAPSN 789
P L++ +DL + E + SL +Q+ + Y+ +K + + P+ +TS++G TA VL G +W +R V +F S+VYL+PDA++ L + + VYVIGGIVDR + +G++ AA+ + TARLP + + + R L V + VL++VHA + +WR AL + +P R+ A + R RGG+ G N
Sbjct: 117 PRHLRIALDLHYGERIHGLRGTRSLTQQVGWCYHALKRASSFDHTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEIFPRPSIVYLTPDADQVLAAPMDLSKVYVIGGIVDRTVVRGVSAQAAKEWEVETARLPLELLDLKANKATRALNVDTVLKVLMSVHANKGDWRGALTECLPKRKAAARSKKEEKRDRGGSGEGGTSGN 324
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: K8YSZ8_NANGC (tRNA (guanine(9)-N(1))-methyltransferase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSZ8_NANGC) HSP 1 Score: 108 bits (270), Expect = 1.600e-21 Identity = 66/186 (35.48%), Postives = 106/186 (56.99%), Query Frame = 1
Query: 193 PCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASIT---PPVLTLTSYRGRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVV-ATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGE-NWRAALEQSVPHRRVA 735
P L++ +DL + E + SL +Q+ + Y+ +K + + P+ +TS++G TA VL G +W +R V VF S+VYL+PDA++ L + + VYVIGGIVDR + +G++ AA+ + TARLP + + R L V + VL++VHA + +WRAAL + +P R+ A
Sbjct: 252 PRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTADVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKVYVIGGIVDRTVVRGVSAQAAKEWEVETARLPLELLDLKAKKASRALNVDTVLKVLMSVHANKGDWRAALTECLPKRKAA 437
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A813A211_SYMMI (TRMT10B protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A211_SYMMI) HSP 1 Score: 101 bits (252), Expect = 6.940e-21 Identity = 70/198 (35.35%), Postives = 102/198 (51.52%), Query Frame = 1
Query: 196 CSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYR--GRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRV----AHGIRRPRGGAWR 771
L + +DL+ ++ + S +E +SLA Q+ Y ++ S P L L S G A V+ +W HR DV F + +V+LSPDA+EPL+ VV VYVIGG+VD+N+ + IT A+ RLP + P S R+ VL V + V L A +W+ AL VP R++ A + +GG WR
Sbjct: 3 ADLHICIDLALSD-ENSARENNSLAIQIRNAYGVIRKSEIPVALHLASLAPGGCIAEVIAKQNCDAWHIHRHAEDVEDAFAPSELVFLSPDADEPLDAVVPGKVYVIGGVVDKNIKRKITLGKAQEHDIPAYRLPVREIFP--SCRNTVLNVDSVVQALCVFAAHRDWQVALRGCVPLRKLSADAAAALGAEQGGRWR 197
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A0M0JFP8_9EUKA (RNA (Guanine-9-)-methyltransferase domain-containing protein 2-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFP8_9EUKA) HSP 1 Score: 102 bits (255), Expect = 4.480e-20 Identity = 69/190 (36.32%), Postives = 108/190 (56.84%), Query Frame = 1
Query: 175 KAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNVGAG--SWLAHRWPLDVFAVF-DNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVA 735
+AAM+ VVDLS+ E + +E++SLA+QL Y ++ + S P L TS G+ A L + G +W P VF +++S+VYLS +++ L+ + +++VY++GG+VD N KG+T A RTARLP D+Y+ +S R RVL V V +L +G +W + L + +P RR A
Sbjct: 138 RAAMEHRALPTCVVDLSFDEL-MNDREIASLAQQLSYCHSANRRSAFPMRLAFTSVGGKLEAKLKSGWPGWRNWAIRPEPRHYLEVFPEHSSLVYLSSESDVVLDTLDSSEVYIVGGLVDHNKQKGLTHRLASEANVRTARLPIDEYM-SMSQR-RVLAVNHVVEILTLRASGLDWTSVLTKVMPQRREA 324
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A067BJ29_SAPPC (SAM-dependent MTase TRM10-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BJ29_SAPPC) HSP 1 Score: 99.8 bits (247), Expect = 1.210e-19 Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = 1
Query: 127 IILKERRDKEEQLGRLKAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNVGA-GSWLAHRW-PLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVA 735
+++++ R ++ L AA + P +V+D + E S KE SL +Q+ + Y K S TP + +TS RG A L +G WLA P VF S+VYL+ D+ ++E+ + VY+IGGIVDRN KG+T A A TA+LP D L E+ RVLTV +L+ ++W A ++P R+ A
Sbjct: 74 VLMRKERAIAKRESFLMAASEGPT---IVIDCGFEEA-MSSKEKKSLTQQIMFSYGINKRSETPANVHVTSVRGEAEANLTKIGGFNDWLAFSTTPKCYMDVFRKESLVYLTADSPNVIDELQSDKVYIIGGIVDRNRLKGVTYEKAVAQGIATAKLPLDKVL-EMGQATRVLTVNHVFQILVNYRTAQDWTQATLSALPARKGA 273
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A1V9ZIH2_9STRA (RNA (Guanine-9-)-methyltransferase domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIH2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.260e-19 Identity = 70/191 (36.65%), Postives = 99/191 (51.83%), Query Frame = 1
Query: 172 LKAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNVGAGS-WLAHRWPLDVFA-VFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVAH 738
L AA + P +V+D + E D S KE SL++Q+ + Y K +P + LTS G T A L +G S WLA + F S+VYL+ D+ +EE+ + VY+IGGIVDRN KG T A A TA+LP D + E+ RVLTV +L+ ++W A ++P R+ AH
Sbjct: 92 LMAANEGPT---IVIDCGFEE-DMSSKEKKSLSQQIMFSYGINKRCESPATVFLTSLHGETEANLQKIGGFSEWLAFDATTKCYMDTFRKESLVYLTADSPNVIEELSSDKVYIIGGIVDRNRLKGATYEKAVAQGIATAKLPLDKVV-EMGQATRVLTVNHVFQILVDYQTKQDWTQATMSALPARKGAH 277
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A2P6V0W7_9CHLO (tRNA (Guanine-N1)-methyltransferase domain containing n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0W7_9CHLO) HSP 1 Score: 100 bits (248), Expect = 1.530e-19 Identity = 78/194 (40.21%), Postives = 99/194 (51.03%), Query Frame = 1
Query: 217 DLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAA-VLDNVGAGSWLA---HRWPL-DVFAVFDNTSVVYLSPDAEEPLEEVVATD-VYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVAHGIRRPRGGAWRGAA 780
D + A+ +E+ SL KQL K + P L S+ G L+ +GA W A H PL D+F V S+V LSPDAEEPL + D VYVIGG+VDR + KG T A A+ AR RLP + L + VL + L+AVHAG+ W AALE +VP R +RRP GAA
Sbjct: 85 DAATPSAAATAREVRSLCKQLQMCAAANKRASRPVNLHFASFNGEVRRFALEGMGAAGWPAARGHAEPLPDLFPV---DSLVVLSPDAEEPLLGGLEKDKVYVIGGLVDRTVQKGATLALAQRCGARAVRLPIVETLGGLPTGRGVLNINDVFEALLAVHAGQCWAAALEAAVPQR-----LRRPHDAPAGGAA 270
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A8B8DCP1_CRAVI (tRNA methyltransferase 10 homolog B-like n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DCP1_CRAVI) HSP 1 Score: 98.6 bits (244), Expect = 4.880e-19 Identity = 70/208 (33.65%), Postives = 105/208 (50.48%), Query Frame = 1
Query: 127 IILKERRD-KEEQLGRLKAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNV----GAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLP--EVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRR 729
+IL R++ +EE +L+ AM C ++ VDLS E + KE S LA+QLC +Y K + P + + + + G + V +FD V+YL+PDAE+ LEE+ VYVIGGIVD ++ K ++K A A T RLP D Y+ E +VL + +L+ + +WRAAL + VP R+
Sbjct: 96 VILPTRKEMREEMKSKLETAM--MCGQRICVDLSM-ENTMTTKERSKLAQQLCRLYGVNKKADVPAHVYFAGFDKNGELYQECIRKIDGFEKYQVEMTAAPVSELFDVKDVIYLTPDAEDMLEELDKDKVYVIGGIVDESIIKNLSKQKANAFNIPTVRLPIDRYMKKKEQIHFSQVLAINQVFEILVTYLSSNDWRAALSRGVPERK 300
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A7S4NN01_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NN01_GUITH) HSP 1 Score: 97.4 bits (241), Expect = 1.130e-18 Identity = 64/177 (36.16%), Postives = 94/177 (53.11%), Query Frame = 1
Query: 205 QLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNV-GAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRV 732
++V+DLS+ + + KE+ SL QL + Y +AS P L LTS RTA L + G +W H VF VVYL+ ++ + E+ VY IGGIVD N KG+TK A+ TA+LP D + R +VLTV +L+ H NW+ +L+Q++P R++
Sbjct: 127 RVVIDLSF-DDLMTEKEVRSLVTQLAHSYGTNRASGKPLDLYLTSVDKRTAEGLKKISGFDNWRCHVETRHFSEVFPKNEVVYLTSESSNTMNELQKDKVYCIGGIVDHNRLKGLTKQKADENGWDTAKLPLDGNIDLGESR-KVLTVNHVCSILLKYHETGNWKESLKQAMPERKL 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11888.1461.1 >prot_H-elongata_contig11888.1461.1 ID=prot_H-elongata_contig11888.1461.1|Name=mRNA_H-elongata_contig11888.1461.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=260bp MDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLback to top mRNA from alignment at H-elongata_contig11888:429..3307+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11888.1461.1 ID=mRNA_H-elongata_contig11888.1461.1|Name=mRNA_H-elongata_contig11888.1461.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2879bp|location=Sequence derived from alignment at H-elongata_contig11888:429..3307+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11888:429..3307+ >mRNA_H-elongata_contig11888.1461.1 ID=mRNA_H-elongata_contig11888.1461.1|Name=mRNA_H-elongata_contig11888.1461.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1560bp|location=Sequence derived from alignment at H-elongata_contig11888:429..3307+ (Himanthalia elongata Himel1 dioecious)back to top |