mRNA_H-elongata_contig118649.1444.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI) HSP 1 Score: 249 bits (636), Expect = 1.220e-81 Identity = 117/151 (77.48%), Postives = 136/151 (90.07%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
++ TIGVDFGVKQ+K+P+TDC+VE+FLFDCPGQGVFNKLEQ GAAYY++AAFVCVVFDVS+RDSFESCGRWLQGVRAALPT SAPLPGV+IANK DLR+GGIN+RA V T+EG FA QNGL+YFETSAA KGI+ PFH MA++FH T+
Sbjct: 65 YIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQ--GAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHETY 213
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE) HSP 1 Score: 194 bits (494), Expect = 3.410e-60 Identity = 90/112 (80.36%), Postives = 105/112 (93.75%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQ 336
++ TIGVDFGVKQ+K+P+TDC+VE+FLFDCPGQGVFNKLEQ GAAYY++AAFVCVVFDVS+RDSFESCGRWLQGVRAALP+ SAPLPGV+IANK DLR+GGIN+RA V T+
Sbjct: 65 YIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQ--GAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTE 174
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.710e-58 Identity = 91/148 (61.49%), Postives = 114/148 (77.03%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFH 444
++ T VDF VKQ+++P+ +C VE+FLFDC GQGVFNKL+ A ++D+A+FVCVVFDV +R+SF+SCGRWLQGVRA PTA AP+PGVLI +K DLR+G SRA V QEG RFA++NGL YFE SAA+ G+E PF MA FH
Sbjct: 43 YLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDL--NAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPTA-APMPGVLIGSKADLREG---SRAVVDAQEGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFH 184
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA) HSP 1 Score: 175 bits (443), Expect = 2.880e-52 Identity = 82/151 (54.30%), Postives = 114/151 (75.50%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
+V T GV F VKQ+ IPDT+C VE++LFDC GQ +FN+ EQ +++ ++V VV+DV +RDSF+SC +WLQGVR+ S+ +PGVL+ANK DLR+GGINSRA V+ +EG FA++N LE+FETSAA K ++ PF+F+AS FH+ +
Sbjct: 74 YVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQ--NLKSWENTSYVVVVYDVGNRDSFQSCAKWLQGVRST--RQSSMIPGVLVANKSDLREGGINSRAAVSDEEGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQKY 220
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S1XUM6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUM6_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.080e-40 Identity = 69/149 (46.31%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 10 TIGVDFGVKQMKI--PDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRT 450
T V+F VK + + + E++LFDC GQ +FN++ + +++A++V +V+DV++R+SF+SCGRWLQ +R+ P++ P+PGVL+ANK+DLR ++SRA VT EG FA +NGL YFE SA G GI EPFH +A+ F+ T
Sbjct: 70 TTTVEFTVKLVPVRAEGVNVAAELYLFDCAGQSIFNQV--GTNSKNFENASYVIIVYDVANRESFQSCGRWLQQIRSTRPSSGPPIPGVLLANKIDLRSDMLSSRAEVTESEGRGFAAENGLAYFECSALQGAGINEPFHHIANTFYVT 216
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA) HSP 1 Score: 142 bits (359), Expect = 6.860e-40 Identity = 67/151 (44.37%), Postives = 102/151 (67.55%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
++ TIG +F VKQ+ IP+T+ IVE+F++DC GQ +FN+L+ + YY++A+ V VV++V++RDS SC +W+ GV+A + + PL G + NK + RDG I+SRA V E AE G+ YFETSAA G++ PF ++A F+R +
Sbjct: 50 YLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDL--NSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKA-IQNSGVPLVGAFVGNKCEFRDGSIDSRAEVDILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYRRY 197
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S0SQ35_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ35_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.100e-39 Identity = 67/151 (44.37%), Postives = 105/151 (69.54%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
++ TIG DF VKQ+ IPDT+ +VE+++FDC GQ +FN+LE + YY++AA V VV+D+ ++++ +S +WL G+++A+ S L GVL+ NK D RDG ++SRA V ++ RF++ GL YFE SAA G+ EPF +A+ F++ +
Sbjct: 61 YMMTIGADFNVKQVPIPDTNIVVELYIFDCAGQPIFNQLEM--NSKYYENAAAVMVVYDIGNQETLQSTTKWLTGLKSAVSNPS-DLIGVLVGNKSDYRDGSVDSRAEVVKEDAQRFSKDLGLAYFEASAASNIGVTEPFLHVATEFYKKY 208
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA) HSP 1 Score: 140 bits (352), Expect = 8.260e-39 Identity = 74/151 (49.01%), Postives = 102/151 (67.55%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
++ T VDF VKQ+ IP++ VE++LFDC GQ +FN++E A+Y++A+F+C+V+DVS+ SFESCG+WLQ V + P+ LPGVLIANK DL GG R V+TQ+G FA N L YFETSA G+ +EPF +A F + +
Sbjct: 60 YLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANN--AHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQKGQEFASANNLAYFETSALEGE-FDEPFRHIAIEFAKKY 201
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A0W8DPM3_PHYNI (Phosphatidylinositol 4-kinase beta n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DPM3_PHYNI) HSP 1 Score: 140 bits (352), Expect = 1.220e-38 Identity = 68/155 (43.87%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTWVTAN 465
+V T V+ K + IPDT+ +VE++LFDC GQ +FN+L+ G +Y A+ VVFDV++++SF+SC +W Q VR A P + +PGVL+ANK DLR N+R ++T+E FA++N L+YFE SA G+E PF ++A FH+ + A
Sbjct: 74 YVMTSDVELSTKSIPIPDTNVVVELYLFDCAGQSIFNQLDF--GTVHYKGASMALVVFDVNNKESFKSCSKWYQDVRDASPNHN--IPGVLLANKTDLR---YNNRDAISTKEAEEFAKRNDLKYFECSAQQNSGVEAPFAYIADWFHKKYQAAT 221
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A485KB43_9STRA (Aste57867_2355 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KB43_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.120e-37 Identity = 67/151 (44.37%), Postives = 101/151 (66.89%), Query Frame = 1
Query: 1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
++ T + VK + I +T+ IVE+++FDCPGQ +FN+ E G+ ++D A+ V VVFDV+S++SF+SC +W Q V A P + LPGVL+ NK D ++G +R ++ +E FAEQN L+YFE SA +G G++ PF FMA AF + +
Sbjct: 51 YIMTSNAELYVKPIPIAETNAIVELYMFDCPGQSIFNQREF--GSVHFDGASMVMVVFDVNSKESFKSCTKWYQDV--ANPAPNHQLPGVLVGNKSDNKEG---NRDAISQKEAEDFAEQNNLKYFECSARLGTGVDAPFQFMAKAFKKKY 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig118649.1444.1 >prot_H-elongata_contig118649.1444.1 ID=prot_H-elongata_contig118649.1444.1|Name=mRNA_H-elongata_contig118649.1444.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSback to top mRNA from alignment at H-elongata_contig118649:697..1623- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig118649.1444.1 ID=mRNA_H-elongata_contig118649.1444.1|Name=mRNA_H-elongata_contig118649.1444.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=927bp|location=Sequence derived from alignment at H-elongata_contig118649:697..1623- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig118649:697..1623- >mRNA_H-elongata_contig118649.1444.1 ID=mRNA_H-elongata_contig118649.1444.1|Name=mRNA_H-elongata_contig118649.1444.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=972bp|location=Sequence derived from alignment at H-elongata_contig118649:697..1623- (Himanthalia elongata Himel1 dioecious)back to top |