mRNA_H-elongata_contig118649.1444.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig118649.1444.1
Unique NamemRNA_H-elongata_contig118649.1444.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 1.220e-81
Identity = 117/151 (77.48%), Postives = 136/151 (90.07%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
            ++ TIGVDFGVKQ+K+P+TDC+VE+FLFDCPGQGVFNKLEQ  GAAYY++AAFVCVVFDVS+RDSFESCGRWLQGVRAALPT SAPLPGV+IANK DLR+GGIN+RA V T+EG  FA QNGL+YFETSAA  KGI+ PFH MA++FH T+
Sbjct:   65 YIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQ--GAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHETY 213          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 3.410e-60
Identity = 90/112 (80.36%), Postives = 105/112 (93.75%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQ 336
            ++ TIGVDFGVKQ+K+P+TDC+VE+FLFDCPGQGVFNKLEQ  GAAYY++AAFVCVVFDVS+RDSFESCGRWLQGVRAALP+ SAPLPGV+IANK DLR+GGIN+RA V T+
Sbjct:   65 YIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQ--GAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTE 174          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA)

HSP 1 Score: 188 bits (478), Expect = 5.710e-58
Identity = 91/148 (61.49%), Postives = 114/148 (77.03%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFH 444
            ++ T  VDF VKQ+++P+ +C VE+FLFDC GQGVFNKL+    A ++D+A+FVCVVFDV +R+SF+SCGRWLQGVRA  PTA AP+PGVLI +K DLR+G   SRA V  QEG RFA++NGL YFE SAA+  G+E PF  MA  FH
Sbjct:   43 YLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDL--NAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPTA-APMPGVLIGSKADLREG---SRAVVDAQEGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFH 184          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.880e-52
Identity = 82/151 (54.30%), Postives = 114/151 (75.50%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
            +V T GV F VKQ+ IPDT+C VE++LFDC GQ +FN+ EQ      +++ ++V VV+DV +RDSF+SC +WLQGVR+     S+ +PGVL+ANK DLR+GGINSRA V+ +EG  FA++N LE+FETSAA  K ++ PF+F+AS FH+ +
Sbjct:   74 YVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQ--NLKSWENTSYVVVVYDVGNRDSFQSCAKWLQGVRST--RQSSMIPGVLVANKSDLREGGINSRAAVSDEEGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQKY 220          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S1XUM6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUM6_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.080e-40
Identity = 69/149 (46.31%), Postives = 103/149 (69.13%), Query Frame = 1
Query:   10 TIGVDFGVKQMKI--PDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRT 450
            T  V+F VK + +     +   E++LFDC GQ +FN++     +  +++A++V +V+DV++R+SF+SCGRWLQ +R+  P++  P+PGVL+ANK+DLR   ++SRA VT  EG  FA +NGL YFE SA  G GI EPFH +A+ F+ T
Sbjct:   70 TTTVEFTVKLVPVRAEGVNVAAELYLFDCAGQSIFNQV--GTNSKNFENASYVIIVYDVANRESFQSCGRWLQQIRSTRPSSGPPIPGVLLANKIDLRSDMLSSRAEVTESEGRGFAAENGLAYFECSALQGAGINEPFHHIANTFYVT 216          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.860e-40
Identity = 67/151 (44.37%), Postives = 102/151 (67.55%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
            ++ TIG +F VKQ+ IP+T+ IVE+F++DC GQ +FN+L+    + YY++A+ V VV++V++RDS  SC +W+ GV+A +  +  PL G  + NK + RDG I+SRA V   E    AE  G+ YFETSAA   G++ PF ++A  F+R +
Sbjct:   50 YLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDL--NSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKA-IQNSGVPLVGAFVGNKCEFRDGSIDSRAEVDILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYRRY 197          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S0SQ35_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ35_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.100e-39
Identity = 67/151 (44.37%), Postives = 105/151 (69.54%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
            ++ TIG DF VKQ+ IPDT+ +VE+++FDC GQ +FN+LE    + YY++AA V VV+D+ ++++ +S  +WL G+++A+   S  L GVL+ NK D RDG ++SRA V  ++  RF++  GL YFE SAA   G+ EPF  +A+ F++ +
Sbjct:   61 YMMTIGADFNVKQVPIPDTNIVVELYIFDCAGQPIFNQLEM--NSKYYENAAAVMVVYDIGNQETLQSTTKWLTGLKSAVSNPS-DLIGVLVGNKSDYRDGSVDSRAEVVKEDAQRFSKDLGLAYFEASAASNIGVTEPFLHVATEFYKKY 208          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.260e-39
Identity = 74/151 (49.01%), Postives = 102/151 (67.55%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
            ++ T  VDF VKQ+ IP++   VE++LFDC GQ +FN++E     A+Y++A+F+C+V+DVS+  SFESCG+WLQ V  + P+    LPGVLIANK DL  GG   R  V+TQ+G  FA  N L YFETSA  G+  +EPF  +A  F + +
Sbjct:   60 YLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANN--AHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQKGQEFASANNLAYFETSALEGE-FDEPFRHIAIEFAKKY 201          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A0W8DPM3_PHYNI (Phosphatidylinositol 4-kinase beta n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DPM3_PHYNI)

HSP 1 Score: 140 bits (352), Expect = 1.220e-38
Identity = 68/155 (43.87%), Postives = 101/155 (65.16%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTWVTAN 465
            +V T  V+   K + IPDT+ +VE++LFDC GQ +FN+L+   G  +Y  A+   VVFDV++++SF+SC +W Q VR A P  +  +PGVL+ANK DLR    N+R  ++T+E   FA++N L+YFE SA    G+E PF ++A  FH+ +  A 
Sbjct:   74 YVMTSDVELSTKSIPIPDTNVVVELYLFDCAGQSIFNQLDF--GTVHYKGASMALVVFDVNNKESFKSCSKWYQDVRDASPNHN--IPGVLLANKTDLR---YNNRDAISTKEAEEFAKRNDLKYFECSAQQNSGVEAPFAYIADWFHKKYQAAT 221          
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Match: A0A485KB43_9STRA (Aste57867_2355 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KB43_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.120e-37
Identity = 67/151 (44.37%), Postives = 101/151 (66.89%), Query Frame = 1
Query:    1 FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDSAAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRDGGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRTW 453
            ++ T   +  VK + I +T+ IVE+++FDCPGQ +FN+ E   G+ ++D A+ V VVFDV+S++SF+SC +W Q V  A P  +  LPGVL+ NK D ++G   +R  ++ +E   FAEQN L+YFE SA +G G++ PF FMA AF + +
Sbjct:   51 YIMTSNAELYVKPIPIAETNAIVELYMFDCPGQSIFNQREF--GSVHFDGASMVMVVFDVNSKESFKSCTKWYQDV--ANPAPNHQLPGVLVGNKSDNKEG---NRDAISQKEAEDFAEQNNLKYFECSARLGTGVDAPFQFMAKAFKKKY 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118649.1444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ1_ECTSI1.220e-8177.48IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZL0_9PHAE3.410e-6080.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCC9_9STRA5.710e-5861.49IFT27, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S2XVJ0_9STRA2.880e-5254.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1XUM6_9STRA2.080e-4046.31Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3M1Q0_9STRA6.860e-4044.37Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0SQ35_9STRA1.100e-3944.37Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3JRK5_9STRA8.260e-3949.01Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A0W8DPM3_PHYNI1.220e-3843.87Phosphatidylinositol 4-kinase beta n=12 Tax=Phytop... [more]
A0A485KB43_9STRA1.120e-3744.37Aste57867_2355 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118649contigH-elongata_contig118649:697..1623 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.8
Seed ortholog evalue4.5e-64
Seed eggNOG ortholog2880.D7FJQ1
Preferred nameIFT27
KEGG koko:K07934
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007264,GO:0007275,GO:0007399,GO:0007423,GO:0008104,GO:0008150,GO:0009987,GO:0010970,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022008,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031175,GO:0031344,GO:0031410,GO:0031503,GO:0031514,GO:0031982,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0035556,GO:0035639,GO:0035720,GO:0035721,GO:0035735,GO:0036094,GO:0036126,GO:0042073,GO:0042490,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043583,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045184,GO:0046907,GO:0048468,GO:0048513,GO:0048666,GO:0048699,GO:0048731,GO:0048839,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0060113,GO:0060119,GO:0060122,GO:0060271,GO:0060491,GO:0065007,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0090102,GO:0097159,GO:0097223,GO:0097225,GO:0097228,GO:0097367,GO:0097542,GO:0097708,GO:0097729,GO:0099111,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1901265,GO:1901363,GO:1902017,GO:1902115
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0079@1,KOG0079@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04031
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIFT27, Ras superfamily GTPase
Ec32 orthologEc-06_010640.1
Exons3
Model size486
Cds size486
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118649.1444.1prot_H-elongata_contig118649.1444.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig118649 697..1623 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929694.0529964-CDS-H-elongata_contig118649:696..8461622929694.0529964-CDS-H-elongata_contig118649:696..846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118649 697..846 -
1691679121.5887432-CDS-H-elongata_contig118649:696..8461691679121.5887432-CDS-H-elongata_contig118649:696..846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118649 697..846 -
1622929694.0719447-CDS-H-elongata_contig118649:1097..13041622929694.0719447-CDS-H-elongata_contig118649:1097..1304Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118649 1098..1304 -
1691679121.6077936-CDS-H-elongata_contig118649:1097..13041691679121.6077936-CDS-H-elongata_contig118649:1097..1304Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118649 1098..1304 -
1622929694.088156-CDS-H-elongata_contig118649:1494..16231622929694.088156-CDS-H-elongata_contig118649:1494..1623Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118649 1495..1623 -
1691679121.6165352-CDS-H-elongata_contig118649:1494..16231691679121.6165352-CDS-H-elongata_contig118649:1494..1623Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118649 1495..1623 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig118649.1444.1

>prot_H-elongata_contig118649.1444.1 ID=prot_H-elongata_contig118649.1444.1|Name=mRNA_H-elongata_contig118649.1444.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp
FVQTIGVDFGVKQMKIPDTDCIVEMFLFDCPGQGVFNKLEQARGAAYYDS
AAFVCVVFDVSSRDSFESCGRWLQGVRAALPTASAPLPGVLIANKVDLRD
GGINSRATVTTQEGYRFAEQNGLEYFETSAAVGKGIEEPFHFMASAFHRT
WVTANTFAKLFI
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mRNA from alignment at H-elongata_contig118649:697..1623-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig118649.1444.1 ID=mRNA_H-elongata_contig118649.1444.1|Name=mRNA_H-elongata_contig118649.1444.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=927bp|location=Sequence derived from alignment at H-elongata_contig118649:697..1623- (Himanthalia elongata Himel1 dioecious)
TTTGTTCAGACTATCGGGGTGGACTTCGGTGTGAAACAAATGAAAATTCC CGATACGGACTGCATCGTGGAAATGTTCCTTTTTGATTGCCCCGGCCAAG GCGTCTTCAACAAACTTGAGCAGGCAAGAGTTAAAAAAAACTTTCATCTT AATCAATCTGGTGGTATGGGAAGCGGTGATCATTGGCACGCTGCGTTCAT CAATATGCATTGCGTCGGCAAGGCGAGGTCGTGATATCTCGGCCATAGCT GGCATCCACACATCAGTATTTTATTATACGCTCCGCATGAAAACAATTTG CAACAAACGACTGTCATAGGGCGCGGCATACTACGACAGTGCGGCCTTCG TGTGCGTGGTCTTCGACGTGAGCAGCAGAGACTCGTTCGAGAGCTGCGGT CGTTGGTTACAAGGTGTACGAGCTGCACTACCGACGGCGTCGGCGCCCCT TCCTGGAGTCTTGATCGCGAATAAGGTGGATTTGCGGGATGGAGGCATCA ATTCACGGGCGACGGTGACCACCCAGGTTTGATCGCTTAGCCTTACGTTT CATCCTGGTAGACTCAAAATATTTTTGTTAGATTTAGCTAGCGGGGAAAG TACGCATAGCCAATCGTTTGTATCCCTTAAACGCCATGGTGGGCCTTATT CATGAATCGAGGCAAACTGAAAGACTAAGGTAGTCTAAAGACTCGTTTCG ATTATAAACCAGTAGCACTTCTAAACGTTTGCCCATATATGTAGTCAACT TCCCTGTTTTCCTTGGCTATGCAAAAGGAAGGATATCGCTTCGCCGAACA GAATGGACTTGAGTACTTCGAGACGTCGGCAGCGGTGGGGAAAGGCATTG AAGAACCGTTTCACTTCATGGCGTCTGCCTTCCATCGAACGTGGGTAACT GCGAATACGTTCGCCAAGTTATTTATT
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Coding sequence (CDS) from alignment at H-elongata_contig118649:697..1623-

>mRNA_H-elongata_contig118649.1444.1 ID=mRNA_H-elongata_contig118649.1444.1|Name=mRNA_H-elongata_contig118649.1444.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=972bp|location=Sequence derived from alignment at H-elongata_contig118649:697..1623- (Himanthalia elongata Himel1 dioecious)
TTTGTTCAGACTATCGGGGTGGACTTCGGTGTGAAACAAATGAAAATTCC
CGATACGGACTGCATCGTGGAAATGTTCCTTTTTGATTGCCCCGGCCAAG
GCGTCTTCAACAAACTTGAGCAGGCAAGATTTGTTCAGACTATCGGGGTG
GACTTCGGTGTGAAACAAATGAAAATTCCCGATACGGACTGCATCGTGGA
AATGTTCCTTTTTGATTGCCCCGGCCAAGGCGTCTTCAACAAACTTGAGC
AGGCAAGAGGCGCGGCATACTACGACAGTGCGGCCTTCGTGTGCGTGGTC
TTCGACGTGAGCAGCAGAGACTCGTTCGAGAGCTGCGGTCGTTGGTTACA
AGGTGTACGAGCTGCACTACCGACGGCGTCGGCGCCCCTTCCTGGAGTCT
TGATCGCGAATAAGGTGGATTTGCGGGATGGAGGCATCAATTCACGGGCG
ACGGTGACCACCCAGGGCGCGGCATACTACGACAGTGCGGCCTTCGTGTG
CGTGGTCTTCGACGTGAGCAGCAGAGACTCGTTCGAGAGCTGCGGTCGTT
GGTTACAAGGTGTACGAGCTGCACTACCGACGGCGTCGGCGCCCCTTCCT
GGAGTCTTGATCGCGAATAAGGTGGATTTGCGGGATGGAGGCATCAATTC
ACGGGCGACGGTGACCACCCAGGAAGGATATCGCTTCGCCGAACAGAATG
GACTTGAGTACTTCGAGACGTCGGCAGCGGTGGGGAAAGGCATTGAAGAA
CCGTTTCACTTCATGGCGTCTGCCTTCCATCGAACGTGGGTAACTGCGAA
TACGTTCGCCAAGTTATTTATTGAAGGATATCGCTTCGCCGAACAGAATG
GACTTGAGTACTTCGAGACGTCGGCAGCGGTGGGGAAAGGCATTGAAGAA
CCGTTTCACTTCATGGCGTCTGCCTTCCATCGAACGTGGGTAACTGCGAA
TACGTTCGCCAAGTTATTTATT
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