mRNA_H-elongata_contig118644.1441.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig118644.1441.1
Unique NamemRNA_H-elongata_contig118644.1441.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: D8LN90_ECTSI (UTP--glucose-1-phosphate uridylyltransferase n=4 Tax=Phaeophyceae TaxID=2870 RepID=D8LN90_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 3.100e-71
Identity = 127/190 (66.84%), Postives = 138/190 (72.63%), Query Frame = 1 
Query:    1 QLLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*TC-----------------------------FAPVKKCSDLLLLHSDAYVVNEQYNIVLASER 483
            +LL E +KYMFVSNSDNLGATLDLDLLA+FA++DKPF+MEC ERTESDKKG HL  RK DGQ ILRESAQCAK+D  +FQ   KHKFFNTNNLWVRLDKLKEAID+ GG+IPLAM KN  TVDPQD T                              FAPVKKC+DL LL SDAYVVNE YNIVLA ER
Sbjct:  207 ELLAEGIKYMFVSNSDNLGATLDLDLLAYFATSDKPFLMECCERTESDKKGGHLAKRKADGQFILRESAQCAKEDESDFQDTDKHKFFNTNNLWVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRTRFAPVKKCNDLFLLRSDAYVVNEHYNIVLAPER 396
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: A0A6V1U5R2_HETAK (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U5R2_HETAK)

HSP 1 Score: 222 bits (565), Expect = 2.150e-64
Identity = 114/190 (60.00%), Postives = 134/190 (70.53%), Query Frame = 1 
Query:    1 QLLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*TC-----------------------------FAPVKKCSDLLLLHSDAYVVNEQYNIVLASER 483
            +LL + +KYMFVSNSDNLGATLD+DLL +FA+TDKPF+MEC ERTE+DKKG HL VR+ DGQLILRESAQCA +D   FQ + +H++FNTNNLW+RLDKLKEAID+ GG+IPL M KN  TVDPQD                                FAPVKKC+DLL+L SDAYVV E +  VLA ER
Sbjct:  161 ELLAKGMKYMFVSNSDNLGATLDMDLLTYFATTDKPFMMECCERTENDKKGGHLAVRRADGQLILRESAQCADEDEPMFQDITRHQYFNTNNLWIRLDKLKEAIDAAGGLIPLPMIKNAKTVDPQDGNSTPVFQLETAMGAAIECFAGAGAVVVPRNRFAPVKKCNDLLMLRSDAYVVTEDHRPVLAPER 350
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: A0A836CGV2_9STRA (UTP--glucose-1-phosphate uridylyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV2_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.220e-62
Identity = 116/189 (61.38%), Postives = 131/189 (69.31%), Query Frame = 1 
Query:    1 QLLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*-----------------------------TCFAPVKKCSDLLLLHSDAYVVNEQYNIVLASE 480
            +LL E VKYMFVSNSDNLGATLD+DLLA+ A++DKPFVME  ERTE+DKKG HL VRK D +LILRESAQC   D   FQ   +H+FFNTNNLW+RLD+LK+AI + GG+IPL M KN  TVDPQD                              T FAPVKKCSDLLLL SDAYVVN+ YNIVLA E
Sbjct:  203 KLLAEGVKYMFVSNSDNLGATLDMDLLAYLAASDKPFVMEVCERTEADKKGGHLAVRKSDSRLILRESAQCDGADEKAFQDTGRHRFFNTNNLWIRLDRLKDAIAAAGGLIPLPMIKNPKTVDPQDDKSTPVLQLETAMGAAIECFEGAGAVVVPRTRFAPVKKCSDLLLLRSDAYVVNDAYNIVLAPE 391
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: A0A7S2I286_9STRA (UTP--glucose-1-phosphate uridylyltransferase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I286_9STRA)

HSP 1 Score: 211 bits (536), Expect = 6.270e-61
Identity = 110/185 (59.46%), Postives = 123/185 (66.49%), Query Frame = 1 
Query:    4 LLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*-----------------------------TCFAPVKKCSDLLLLHSDAYVVNEQYNIVL 471
            LL    KYMFVSNSDNLGATLDL +L HFA +D PF+MEC ERTE+DKKG HL VR  DGQLILRESA CA +D   FQ + KH+FFNTNNLW+RLDKLKE ID FGG IPL M KN  TVDP+D                              T FAPVKKC+DLLLL SDAYVV + + +VL
Sbjct:  197 LLEGGFKYMFVSNSDNLGATLDLKILTHFAKSDAPFMMECCERTENDKKGGHLAVRNSDGQLILRESAMCADEDEPAFQDITKHRFFNTNNLWIRLDKLKEIIDKFGGFIPLPMIKNNKTVDPKDDSSQKVVQLETAMGAAIECFEGASAIVVPRTRFAPVKKCNDLLLLRSDAYVVTDDFRMVL 381
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: A0A7S2I2V0_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2V0_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.500e-60
Identity = 110/185 (59.46%), Postives = 123/185 (66.49%), Query Frame = 1 
Query:    4 LLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*-----------------------------TCFAPVKKCSDLLLLHSDAYVVNEQYNIVL 471
            LL    KYMFVSNSDNLGATLDL +L HFA +D PF+MEC ERTE+DKKG HL VR  DGQLILRESA CA +D   FQ + KH+FFNTNNLW+RLDKLKE ID FGG IPL M KN  TVDP+D                              T FAPVKKC+DLLLL SDAYVV + + +VL
Sbjct:  197 LLEGGFKYMFVSNSDNLGATLDLKILTHFAKSDAPFMMECCERTENDKKGGHLAVRNSDGQLILRESAMCADEDEPAFQDITKHRFFNTNNLWIRLDKLKEIIDKFGGFIPLPMIKNNKTVDPKDDSSQKVVQLETAMGAAIECFEGASAIVVPRTRFAPVKKCNDLLLLRSDAYVVTDDFRMVL 381
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: A0A812Y8P8_SYMMI (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y8P8_SYMMI)

HSP 1 Score: 200 bits (509), Expect = 2.910e-60
Identity = 109/185 (58.92%), Postives = 121/185 (65.41%), Query Frame = 1 
Query:    4 LLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQ------------------------D*TC-----FAPVKKCSDLLLLHSDAYVVNEQYNIVL 471
            LL + VKYMFVSNSDNLGATLDLDLL +FA +D PF+MEC +RTE+DKKG HL  RK DGQLILRESAQCAK+D  +FQ V  HKFFNTNNLWVRLD LK  +DS GG +PL    N  TVDPQ                           C     FAPVKKCSDL LL SDAYV+N    +VL
Sbjct:   77 LLADGVKYMFVSNSDNLGATLDLDLLTYFAHSDVPFLMECCQRTEADKKGGHLATRKADGQLILRESAQCAKEDEDQFQSVNTHKFFNTNNLWVRLDLLKALMDSKGGFVPLPTILNSKTVDPQIDSSPKVWQLETAMGAAIECFPGAGAVCVPRSRFAPVKKCSDLFLLRSDAYVINRDNVLVL 261
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: A0A7S1B4F8_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=5 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4F8_9STRA)

HSP 1 Score: 201 bits (511), Expect = 9.390e-60
Identity = 104/188 (55.32%), Postives = 122/188 (64.89%), Query Frame = 1 
Query:    4 LLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*-----------------------------TCFAPVKKCSDLLLLHSDAYVVNEQYNIVLASE 480
            LL +  KYMFVSNSDNLGATLDL +L HF+ +D PF+MEC ERTE+DKKG HL VR  D QL+LRESA C+K D  EFQ V KHK+FNTNNLW+RLDKLKE ++  GG IPL M KN  TVDP+D                              T FAPVKKC+DLLLL SDAY++ + +   L  E
Sbjct:  199 LLADGFKYMFVSNSDNLGATLDLSILTHFSVSDVPFMMECCERTENDKKGGHLCVRNLDQQLVLRESAMCSKDDEAEFQNVSKHKYFNTNNLWIRLDKLKEIVEKSGGFIPLPMIKNSKTVDPKDDESQKVVQLETAMGAAIECFSGASAIVVPRTRFAPVKKCNDLLLLRSDAYIITDDFRAQLNPE 386
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: A0A2D4BRD6_PYTIN (UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BRD6_PYTIN)

HSP 1 Score: 208 bits (529), Expect = 2.280e-59
Identity = 109/190 (57.37%), Postives = 125/190 (65.79%), Query Frame = 1 
Query:    1 QLLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*-----------------------------TCFAPVKKCSDLLLLHSDAYVVNEQYNIVLASER 483
            +LL + VKYMFVSNSDNLGATLDLDLL +FA + KPF+MEC ERTE+DKKG HL  RK DG+LILRESAQC   D V FQ + KH++FNTNNLW+RLDKL E +   GGVI L M KN  TVDP+D                              T FAPVKKC DLLLL SDAYV+ E Y  V+A +R
Sbjct:  203 KLLAQGVKYMFVSNSDNLGATLDLDLLTYFAQSGKPFLMECCERTENDKKGGHLAQRKADGRLILRESAQCESSDEVHFQNISKHRYFNTNNLWIRLDKLAEELKKQGGVIRLPMIKNSKTVDPKDSSSTPVFQLETAMGAAIECFDGAGAVCVPRTRFAPVKKCDDLLLLRSDAYVITEDYRPVIAPQR 392
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: H3HD79_PHYRM (UTP--glucose-1-phosphate uridylyltransferase n=31 Tax=Peronosporaceae TaxID=4777 RepID=H3HD79_PHYRM)

HSP 1 Score: 207 bits (528), Expect = 3.020e-59
Identity = 107/190 (56.32%), Postives = 127/190 (66.84%), Query Frame = 1 
Query:    1 QLLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*-----------------------------TCFAPVKKCSDLLLLHSDAYVVNEQYNIVLASER 483
            +L+ + VKYMFVSNSDNLGATLDLDLL +FA + KPF+MEC ERTE+DKKG HL  R  DG+LILRESAQCA +D  EFQ + KH++FNTNNLW+RLDKL+E +   GGVI L M KN  TVDP+D                              T FAPVKKC DL+LL SDAYV+ E Y  ++A ER
Sbjct:  201 KLVADGVKYMFVSNSDNLGATLDLDLLTYFAESGKPFLMECCERTENDKKGGHLAERTADGRLILRESAQCADEDEKEFQNITKHRYFNTNNLWIRLDKLQEELKKQGGVIRLPMIKNSKTVDPKDSSSTPVFQLETAMGAAIECFDGAGAVCVPRTRFAPVKKCDDLILLRSDAYVITEDYRPIIAPER 390
[Close]
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Match: A0A5D6XTH3_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTH3_9STRA)

HSP 1 Score: 207 bits (527), Expect = 4.260e-59
Identity = 109/190 (57.37%), Postives = 127/190 (66.84%), Query Frame = 1 
Query:    1 QLLVEDVKYMFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*HLTVRKGDGQLILRESAQCAKKDYVEFQGVVKHKFFNTNNLWVRLDKLKEAIDSFGGVIPLAMTKNEMTVDPQD*-----------------------------TCFAPVKKCSDLLLLHSDAYVVNEQYNIVLASER 483
            +LL + VKYMFVSNSDNLGA+LDLDLL +FA + KPF+MEC ERTE+DKKG HL  RK DG+LILRESAQCA +D  +FQ + KH++FNTNNLW+RLDKL E ++  GGVI L M KN  TVDP+D                              T FAPVKKC DLLLL SDAYV+ E    VLA ER
Sbjct:  201 KLLAQGVKYMFVSNSDNLGASLDLDLLTYFAQSGKPFLMECCERTENDKKGGHLASRKADGRLILRESAQCASEDEADFQNIDKHRYFNTNNLWIRLDKLAEELEKQGGVIRLPMIKNAKTVDPKDASSTAVFQLETAMGAAIECFDGAGAVCVPRTRFAPVKKCDDLLLLRSDAYVITEDQRPVLAPER 390
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118644.1441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN90_ECTSI3.100e-7166.84UTP--glucose-1-phosphate uridylyltransferase n=4 T... [more]
A0A6V1U5R2_HETAK2.150e-6460.00Phosphoglucomutase (alpha-D-glucose-1,6-bisphospha... [more]
A0A836CGV2_9STRA3.220e-6261.38UTP--glucose-1-phosphate uridylyltransferase-domai... [more]
A0A7S2I286_9STRA6.270e-6159.46UTP--glucose-1-phosphate uridylyltransferase (Frag... [more]
A0A7S2I2V0_9STRA2.500e-6059.46UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A812Y8P8_SYMMI2.910e-6058.92UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A7S1B4F8_9STRA9.390e-6055.32UTP--glucose-1-phosphate uridylyltransferase n=5 T... [more]
A0A2D4BRD6_PYTIN2.280e-5957.37UTP--glucose-1-phosphate uridylyltransferase n=2 T... [more]
H3HD79_PHYRM3.020e-5956.32UTP--glucose-1-phosphate uridylyltransferase n=31 ... [more]
A0A5D6XTH3_9STRA4.260e-5957.37UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118644contigH-elongata_contig118644:370..1509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score79.3
Seed ortholog evalue4.7e-13
Seed eggNOG ortholog2880.D8LN90
Preferred namePGM2
KEGG rclassRC00002,RC00408
KEGG koko:K00963,ko:K01835
KEGG ReactionR00289,R00959,R01057,R08639
KEGG Pathwayko00010,ko00030,ko00040,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00040,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130
KEGG ModuleM00129,M00361,M00362,M00549
GOsGO:0000271,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005982,GO:0005996,GO:0006006,GO:0006012,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009250,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009581,GO:0009582,GO:0009590,GO:0009605,GO:0009628,GO:0009629,GO:0009987,GO:0010035,GO:0010038,GO:0010319,GO:0015980,GO:0016020,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019252,GO:0019318,GO:0019320,GO:0019388,GO:0031967,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046686,GO:0050896,GO:0051606,GO:0055114,GO:0071704,GO:0071944,GO:1901575,GO:1901576
EggNOG free text desc.Utp--glucose-1-phosphate uridylyltransferase
EggNOG OGsCOG0033@1,COG4284@1,KOG0625@2759,KOG2638@2759
EC2.7.7.9,5.4.2.2
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryno signal peptide or anchor
Exons3
Model size483
Cds size129
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118644.1441.1prot_H-elongata_contig118644.1441.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig118644 397..795 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929693.8213747-UTR-H-elongata_contig118644:369..3961622929693.8213747-UTR-H-elongata_contig118644:369..396Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig118644 370..396 +
1691679121.5002298-UTR-H-elongata_contig118644:369..3961691679121.5002298-UTR-H-elongata_contig118644:369..396Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig118644 370..396 +
1622929693.8638937-UTR-H-elongata_contig118644:795..9261622929693.8638937-UTR-H-elongata_contig118644:795..926Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig118644 796..926 +
1691679121.5284045-UTR-H-elongata_contig118644:795..9261691679121.5284045-UTR-H-elongata_contig118644:795..926Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig118644 796..926 +
1622929693.8753247-UTR-H-elongata_contig118644:1313..15091622929693.8753247-UTR-H-elongata_contig118644:1313..1509Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig118644 1314..1509 +
1691679121.535908-UTR-H-elongata_contig118644:1313..15091691679121.535908-UTR-H-elongata_contig118644:1313..1509Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig118644 1314..1509 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929693.832071-CDS-H-elongata_contig118644:396..5001622929693.832071-CDS-H-elongata_contig118644:396..500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118644 397..500 +
1691679121.511591-CDS-H-elongata_contig118644:396..5001691679121.511591-CDS-H-elongata_contig118644:396..500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118644 397..500 +
1622929693.8453088-CDS-H-elongata_contig118644:770..7951622929693.8453088-CDS-H-elongata_contig118644:770..795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118644 771..795 +
1691679121.520369-CDS-H-elongata_contig118644:770..7951691679121.520369-CDS-H-elongata_contig118644:770..795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig118644 771..795 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig118644.1441.1

>prot_H-elongata_contig118644.1441.1 ID=prot_H-elongata_contig118644.1441.1|Name=mRNA_H-elongata_contig118644.1441.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MFVSNSDNLGATLDLDLLAHFASTDKPFVMECFERTESDKKG*
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mRNA from alignment at H-elongata_contig118644:370..1509+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig118644.1441.1 ID=mRNA_H-elongata_contig118644.1441.1|Name=mRNA_H-elongata_contig118644.1441.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1140bp|location=Sequence derived from alignment at H-elongata_contig118644:370..1509+ (Himanthalia elongata Himel1 dioecious)
CAGCTCCTTGTCGAAGACGTGAAATATATGTTCGTATCCAACTCTGACAA
CCTGGGTGCGACCCTAGACCTCGACCTGCTGGCGCACTTTGCTTCCACGG
ACAAGCCCTTCGTCATGGAGTGCTTCGAAAGGTCACGGTAAAGCAATTTA
CCTGTAGCTTTTGATGTAGAGTCCAACGCGGCCTATTTTCCGGGCTGCTG
GCAACCTGGGGAAAATACATGAGGTGGCTAAGGACGAAGGGAAGGGAAGA
AGGTAATGGAGGACGTGGAATATGAGATCGTTTACCGAGCAAAGGCTTGA
GATGTTAATTAGTGTATGTTTATGTTGCAGCGGAATAGGTGAAATATGAA
ACGCAACACTGATCAAATAAAAATAAATGTATTGTCGCATGTTTTTGGCA
GGACGGAGAGCGACAAGAAGGGTTGACATCTCACTGTGCGCAAGGGCGAC
GGTCAGCTAATCCTTCGGGAGTCAGCGCAGTGCGCGAAGAAAGATTATGT
TGAGTTTCAGGGCGTGGTCAAGCATAAGTTCTTTAACACTAACAACCTCT
GGGTCCGGTGAGACGACCGCAATGTGAGTCAACACCATGTCGTACTATGC
ACCCCCTCTTACTGAACAAAGATTCGAGGATGTTGACTGCTCCTTGGGGG
GAGGCGCCCGAGCTTGAACTCGCGGATCTTAGCTCGAAAGATCTGGTAGG
AAATTGATGAGGATTGAATTAAGTCTCATGTCAGGGCCCTCACCGCGGAT
TGATCGTTCACTTCAGACTCAACCTTGTCTACTCTAGCTCAACGTGAGGC
GGTCAAACCAAAATATCTGCCATGATTAATCAAAGTATCGGATGAAATGA
TCGCTCCTACCATTGCCTTTAAATCGTACGTATGTATAATGTGCAGTAGA
TTCTTCATTTCATGTCGCCTCCGATTTTATTTCGTCTCACGAAGTTTGGA
CAAGCTGAAAGAGGCTATCGACTCGTTCGGGGGTGTGATACCCCTTGCTA
TGACCAAGAATGAAATGACAGTGGACCCTCAAGATTAAACTTGTTTTGCT
CCCGTTAAGAAGTGCAGCGATCTGCTCCTCCTGCATTCAGACGCGTACGT
GGTGAACGAGCAATACAACATCGTGCTCGCTTCGGAGAGG
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Coding sequence (CDS) from alignment at H-elongata_contig118644:370..1509+

>mRNA_H-elongata_contig118644.1441.1 ID=mRNA_H-elongata_contig118644.1441.1|Name=mRNA_H-elongata_contig118644.1441.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=258bp|location=Sequence derived from alignment at H-elongata_contig118644:370..1509+ (Himanthalia elongata Himel1 dioecious)
ATGTTCGTATCCAACTCTGACAACCTGGGTGCGACCCTAGACCTCGACCT
GCTGGCGCACTTTGCTTCCACGGACAAGCCCTTCGTCATGGAGTGCTTCG
AAAGATGTTCGTATCCAACTCTGACAACCTGGGTGCGACCCTAGACCTCG
ACCTGCTGGCGCACTTTGCTTCCACGGACAAGCCCTTCGTCATGGAGTGC
TTCGAAAGGACGGAGAGCGACAAGAAGGGTTGAGACGGAGAGCGACAAGA
AGGGTTGA
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