mRNA_H-elongata_contig11827.1409.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A6H5JXE6_9PHAE (Calcium-transporting ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXE6_9PHAE) HSP 1 Score: 339 bits (870), Expect = 1.650e-106 Identity = 176/216 (81.48%), Postives = 195/216 (90.28%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIPATEK----VH-KDGELGLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
AN+ALRTLCLAH+D+AS ++L+ GYE++SPDADTMVLDAVVGIMDPLRGDV EAVATAQ AGVMVRMVTGDNINTAKAIA++CGIYDP+YGVALEGP FRAMSPAQ+DEVLPRLQVLARSSPNDKYLLVTRLNG+GIPA E+ +H KDG+LGLS+ HK+LLLPGY EEWK R+ GEVVGVTGDGTNDAPALKAADVGLSMGITGTKV
Sbjct: 569 ANNALRTLCLAHMDYASTSDLDEGYEIDSPDADTMVLDAVVGIMDPLRGDVTEAVATAQSAGVMVRMVTGDNINTAKAIAKECGIYDPDYGVALEGPDFRAMSPAQVDEVLPRLQVLARSSPNDKYLLVTRLNGNGIPANEEEWRNLHDKDGDLGLSWDAHKDLLLPGYKEEWK----RQNKSGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 780
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A835ZLB8_9STRA (Calcium-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLB8_9STRA) HSP 1 Score: 287 bits (734), Expect = 4.660e-87 Identity = 157/216 (72.69%), Postives = 176/216 (81.48%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIPATE----KVH-KDGELGLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
A+ ALRT+CLAH D+A EL G+E SPD+D MV DA+VGIMDPLR +VKEAVATAQRAGVMVRMVTGDNI+TAKAIAR CGI E GVALEGP FRAM+PAQ+DEVLPRLQVLARS+PNDKYLLVTRLNGH +P E ++H KDG GLS+A ++ +LPGY +EW A G GEVVGVTGDGTNDAPALKAADVGLSMGITGTKV
Sbjct: 593 ADRALRTICLAHKDYAGTAELPAGWETASPDSDDMVCDAIVGIMDPLRPEVKEAVATAQRAGVMVRMVTGDNIHTAKAIARDCGILR-EGGVALEGPSFRAMTPAQVDEVLPRLQVLARSTPNDKYLLVTRLNGHNMPRNEAEWKELHDKDGLRGLSWAADRDKMLPGYADEWHKANP---GGGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 804
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A835ZDK6_9STRA (Calcium-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK6_9STRA) HSP 1 Score: 286 bits (733), Expect = 1.350e-86 Identity = 159/216 (73.61%), Postives = 176/216 (81.48%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIPATE----KVH-KDGELGLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
A+ ALRT+C+AHIDF S +L G+E ESPD+D MV DAVVGIMDPLR +VKEAVATAQ AGVMVRMVTGDNI+TAKAIAR CGI E GVALEGP FR M+PAQ+DEVLPRLQVLARS+PNDKYLLVTRLNGH +P E ++H K G LGLS+ ++ LLPGY EEW A KGG EVVGVTGDGTNDAPALKAADVGLSMGITGTKV
Sbjct: 627 ADRALRTICIAHIDFDSVADLPAGWETESPDSDQMVCDAVVGIMDPLRPEVKEAVATAQHAGVMVRMVTGDNIHTAKAIARDCGILR-EGGVALEGPTFRNMTPAQVDEVLPRLQVLARSTPNDKYLLVTRLNGHNMPKNEAEWKEIHDKTGVLGLSWETDRDRLLPGYAEEWAKA-NPKGG--EVVGVTGDGTNDAPALKAADVGLSMGITGTKV 838
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A7S3Y3S6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3S6_HETAK) HSP 1 Score: 258 bits (659), Expect = 2.520e-79 Identity = 137/213 (64.32%), Postives = 168/213 (78.87%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYE--VESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIPATEKVHKDGELGLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
A+ ALRT+ +AH DFAS +EL ++ V D + +VLD +VGI DPLRGDV+EAVATAQRAGV+VRMVTGDNI TA+AIARQCGI + G+A+EGP FR M+PAQ+D +LP+LQVLARSSP+DKYLLVTRLNG G+P + ++ GLS+ ++L+LPGY EEW + GG+ VVGVTGDGTNDAPALKAA+VGLSMGITGTKV
Sbjct: 343 ADQALRTIAVAHRDFASADELPANWKEGVGELDTEGLVLDCLVGIQDPLRGDVREAVATAQRAGVVVRMVTGDNIQTARAIARQCGILTAD-GIAMEGPDFRKMTPAQVDRILPKLQVLARSSPDDKYLLVTRLNGQGLPKDQASWEEQHPGLSWGGDRDLVLPGYREEWAAGRGKDGGH--VVGVTGDGTNDAPALKAANVGLSMGITGTKV 552
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A7S3Y3V0_HETAK (Calcium-transporting ATPase n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3V0_HETAK) HSP 1 Score: 258 bits (659), Expect = 1.800e-76 Identity = 137/213 (64.32%), Postives = 170/213 (79.81%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYE--VESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIPATEKVHKDGELGLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
A+ ALRTL +AH +F S +L G++ + DA+ +VLD +VGI DPLRGDV+EAVATAQRAGV+VRMVTGDNI TA+AIARQCGI + G+A+EGP FR M+PAQ+D++LP+LQVLARSSP+DKYLLVTRLNG G+P + ++ GLS+A ++L+LPGY EEW + GG+ VVGVTGDGTNDAPALKAA+VGLSMGITGTKV
Sbjct: 552 ADSALRTLGVAHREFPSVGDLPEGWKDNLGDLDAEGLVLDCLVGIQDPLRGDVREAVATAQRAGVVVRMVTGDNIQTARAIARQCGILTAD-GIAMEGPDFRKMTPAQVDKILPKLQVLARSSPDDKYLLVTRLNGQGLPKDQASWEEAHPGLSWASDRDLVLPGYREEWVASRGEDGGH--VVGVTGDGTNDAPALKAANVGLSMGITGTKV 761
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A482SEH8_9ARCH (HAD family hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEH8_9ARCH) HSP 1 Score: 254 bits (649), Expect = 2.010e-76 Identity = 140/215 (65.12%), Postives = 165/215 (76.74%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIP----ATEKVHKDGELGLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
A +ALRTLCLAH DF S ++L +E PD +VLD +VGI+DPLR DVKEAV AQ AGV VRMVTGDNI TA AIARQCGI P G+A+EGP FR M P +D +LPRLQVLARSSP+DK+LLVTRLNG+GIP A EK KD E G+++ + ++LL+PGY EEW+ + + G+VVGVTGDGTNDAPALKAADVGLSMGITGTKV
Sbjct: 254 AENALRTLCLAHRDFKSVSDLPAKWEDNPPDNANLVLDCIVGIIDPLRSDVKEAVRVAQEAGVTVRMVTGDNIATACAIARQCGILTPT-GLAMEGPTFRKMKPKDVDAILPRLQVLARSSPDDKFLLVTRLNGYGIPEDKEAWEKKFKDRE-GVTWEKDRDLLMPGYREEWE---ESRPEGGQVVGVTGDGTNDAPALKAADVGLSMGITGTKV 463
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: W7TSK5_9STRA (Calcium-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSK5_9STRA) HSP 1 Score: 255 bits (651), Expect = 3.140e-75 Identity = 132/211 (62.56%), Postives = 162/211 (76.78%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIPATEKVHKDGELGLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
AN ALRTLC+AH DF L +E PD + +V D +VGI+DPLR DVK+AV TAQ+AGVMVRM+TGDNI+TA+AIAR CGI P G+A+EGPVFR ++PAQLDE+LPR+QV+ARSSP DKYL+VTRLNG +P + ++ G + + K+LLLPGY +EW + GG+ VVGVTGDGTNDAPALKAADVGLSMGITGT+V
Sbjct: 571 ANRALRTLCIAHRDFPPGEALPADWEDVPPDHENLVCDGIVGIIDPLREDVKDAVKTAQKAGVMVRMITGDNIHTAQAIARDCGILTPG-GLAIEGPVFRNLTPAQLDELLPRIQVMARSSPEDKYLMVTRLNGANLPKDKASWEEKHPGRDWEEEKDLLLPGYYQEWNASRGSDGGH--VVGVTGDGTNDAPALKAADVGLSMGITGTQV 778
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A812WBN1_SYMMI (ATP2B1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WBN1_SYMMI) HSP 1 Score: 239 bits (611), Expect = 6.480e-73 Identity = 134/214 (62.62%), Postives = 162/214 (75.70%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIP---ATEKVHKDGELGLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
ANDALRTLC+AH DFA L ++ PD + D +VGI+DPLR DV +AV TAQ AGV VRMVTGDNINTAKAIARQCGI +G A+E PVFRAM+PAQ+D +LP L+V+ARSSP+DKYLLVTRLNG IP A + + G+++ + ++LLLPGYV EW+ A + +GG +VVGVTGDGTNDAPALKAADVGL+MGI GTKV
Sbjct: 163 ANDALRTLCIAHRDFAP-GTLPADWQDNVPDDAELCCDCIVGIIDPLRSDVIDAVRTAQNAGVTVRMVTGDNINTAKAIARQCGILTA-HGQAIEEPVFRAMTPAQVDAILPNLEVMARSSPDDKYLLVTRLNGFAIPNGKAEWEEKHNNRPGVTWEKDRDLLLPGYVAEWE-ASRPEGG--QVVGVTGDGTNDAPALKAADVGLAMGIAGTKV 371
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A7S3HU65_9STRA (Calcium-transporting ATPase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU65_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.490e-72 Identity = 132/217 (60.83%), Postives = 164/217 (75.58%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIP---ATEKVHKDGEL---GLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
A+ ALRTLCLAH D+ + L ++ PD D +VLD +VGI+DPLR DVKEAV AQ AGV VRMVTGDNI TAKAIARQCGI E+G A+EGP FR ++PA+ D +LP LQV+ARSSP+DKYLLVTRLNG+GIP A +V + G+++ +H++L+LPGY EEW+ + + G+VV VTGDGTNDAPALKAADVG++MGITGTKV
Sbjct: 533 ADKALRTLCLAHKDYPNAAALPENWQENPPDHDNLVLDCIVGIIDPLRSDVKEAVRIAQAAGVTVRMVTGDNIATAKAIARQCGILT-EHGTAIEGPAFRKLTPAEADAILPNLQVMARSSPDDKYLLVTRLNGYGIPNDKAEWEVKMKARIEADGITWEKHRDLILPGYREEWE---ETRPEGGDVVAVTGDGTNDAPALKAADVGMAMGITGTKV 745
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Match: A0A7S3HT93_9STRA (Calcium-transporting ATPase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HT93_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.620e-72 Identity = 132/217 (60.83%), Postives = 164/217 (75.58%), Query Frame = 1
Query: 1 ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDVKEAVATAQRAGVMVRMVTGDNINTAKAIARQCGIYDPEYGVALEGPVFRAMSPAQLDEVLPRLQVLARSSPNDKYLLVTRLNGHGIP---ATEKVHKDGEL---GLSFAQHKNLLLPGYVEEWKCAPQRKGGYGEVVGVTGDGTNDAPALKAADVGLSMGITGTKV 633
A+ ALRTLCLAH D+ + L ++ PD D +VLD +VGI+DPLR DVKEAV AQ AGV VRMVTGDNI TAKAIARQCGI E+G A+EGP FR ++PA+ D +LP LQV+ARSSP+DKYLLVTRLNG+GIP A +V + G+++ +H++L+LPGY EEW+ + + G+VV VTGDGTNDAPALKAADVG++MGITGTKV
Sbjct: 547 ADKALRTLCLAHKDYPNAAALPENWQENPPDHDNLVLDCIVGIIDPLRSDVKEAVRIAQAAGVTVRMVTGDNIATAKAIARQCGILT-EHGTAIEGPAFRKLTPAEADAILPNLQVMARSSPDDKYLLVTRLNGYGIPNDKAEWEVKMKARIEADGITWEKHRDLILPGYREEWE---ETRPEGGDVVAVTGDGTNDAPALKAADVGMAMGITGTKV 759 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11827.1409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11827.1409.1 >prot_H-elongata_contig11827.1409.1 ID=prot_H-elongata_contig11827.1409.1|Name=mRNA_H-elongata_contig11827.1409.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=211bp ANDALRTLCLAHIDFASENELERGYEVESPDADTMVLDAVVGIMDPLRGDback to top mRNA from alignment at H-elongata_contig11827:6751..8120- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11827.1409.1 ID=mRNA_H-elongata_contig11827.1409.1|Name=mRNA_H-elongata_contig11827.1409.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1370bp|location=Sequence derived from alignment at H-elongata_contig11827:6751..8120- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11827:6751..8120- >mRNA_H-elongata_contig11827.1409.1 ID=mRNA_H-elongata_contig11827.1409.1|Name=mRNA_H-elongata_contig11827.1409.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1266bp|location=Sequence derived from alignment at H-elongata_contig11827:6751..8120- (Himanthalia elongata Himel1 dioecious)back to top |