mRNA_H-elongata_contig11798.1391.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 6.350e-174 Identity = 334/810 (41.23%), Postives = 441/810 (54.44%), Query Frame = 1
Query: 1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDI-----------------------------------TDVARIEAALVWLIANNPAYRD-VRMDISRIAH-LGDKE------VNVIHLFDTIPADDEE-----------------------------------------------EGDGDAGDSSGDPPERQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNST---TVNYPRAGEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDP------AARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--W-CAGG----------------------SDAD---------GGVVDMEYEHVQDEIIEFLRDIGYTATNPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDE-------GFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLMQTPSVHHSLEFI 2010
KFG N+T+P VP +++L M E +IARA PVVK+ R GG YEGH +S+ QDI ++AR+E AL++LI ++PAYR V +D++R+ LG E V+V+HLF TI D+ E E D A D G R R +GP ESF+ + SEED +R AL +T G++ + YPR P+RED TP L +MCFPTLFP G G+ F A +R VS + + HL+KF D P YRFA H TF YW L++R+ QAK+Q RVFL + V L V + I QL+ A R+ AN+ GTDGYW+ GKLE++++ + + F TYSAA+HHW+D+ L P G EP PG+ A R R LIDNPH+ADWW+W+RM +E+FLG + DA W WMRAEW++RASLH+HG W C G + D GGV D E+ VQ++I+ FL +G+TA NP+ A++ PV ++A R REEL R MRDF W D +RRY NL N +QRHTKCG YCL+NG CRFGFPK+R+ R+D H L T+ D+ V+VTPPN S G C+ VNRH + QLLAWG N D SPIV+H A YMVKY SKGE S+EA+++L LVR + + RLSL QI+R+++N TTRRDMG QE+MH+ +Q P V ++EF+
Sbjct: 110 KFGEVNRTVPPPVPGYMQNLTMTEEMLIARASPVVKVVRLAGGMHGYEGHVLSMGQDIGEFATRLPWLPTSEEIPVVIVQPPEGGSWAGRNFKVNLARVEGALLYLIRHSPAYRGIVHIDMARLRERLGGLERDENVDVDVMHLFHTITDDNAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRRPRSRVCGVEIAPNLLELDDIADDPEGASELRARPRRGPTESFVKSANVRQQSEEDALREALMDITGYRGDAAGEASFEYPRRTGPVRED-TPWLGSMCFPTLFPKGVGDPFGDAGMRSVSFVHFIAHLMKFVDRPEGRA---PHYRFASHRTFRYWALDVRLRRQAKQQCRVFLRNHEGLVNLDPTDVDDGTISQLMRIALRYVANVPGTDGYWMRWQGKLEDSLNQLQSLTTFTTYSAANHHWYDLFRLMPASGPEPAPGEGGLIRPVAERTRPLIDNPHLADWWIWERMHKLDEIFLGNAMADASWFWMRAEWQSRASLHIHGMSSWNCEGDRRVTELSRTYLRVYIARRRRATEEPDXXXXXXXXXGGVPD-EFVRVQEDIVRFLEKVGFTARNPSLPADDTPVGEEACARSREELERYMRDFPWHDVDECRRRYANLVNGAQRHTKCGPYCLRNGRCRFGFPKKRDGRMRLDPHPLTGNPTDDPNDYHVVVTPPNASPPAEGQRGPGPCNRSVNRHVQSQLLAWGANTDFSPIVDHGGAATYMVKYASKGECSSKEARKMLLTLVRDAADQLPDGPERLSLPQIMRKIINCATTRRDMGFQEVMHMNLQIPMVFKNVEFV 914
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE) HSP 1 Score: 541 bits (1395), Expect = 7.490e-173 Identity = 325/777 (41.83%), Postives = 431/777 (55.47%), Query Frame = 1
Query: 1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDI-----------------------------------TDVARIEAALVWLIANNPAYRDVR--MDISRIA-HLGDK------EVNVIHLFDTIPADDEEEGDGDAGDSSGDPPERQRDYQG------------PRESFIPADAPGGLSEEDDIRRALQSLTQ----GGGNSTTVNYPRAGEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAA-------RHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--W-CAG------------------------GSD--ADGGVVDMEYEHVQDEIIEFLRDIGYTATN----PAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNV-------SDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLMQTPSVHHSLEFI 2010
KF VEN T+P VP L+ L M E MI+ A PV K+ R GG Y+GH +S+ QDI + R++ AL +L+ ++P Y D+R +D+ R+ HL D+ E++V+ LF T+ + G GD E RDY+G ++SFIP G SE + +R+ L+ +T G + T+ YP PLRED TP L +MCFPTLFP G G+ R ++ +D +THL+KF D +G E P YRFA H TF YW L++R+ A+ + R+FL N L V + I+QL+ ATR+ AN+ GTDGYW GKLE+ +D + S F TYSAADHH D++ L P G EP G A R+R LI NPHIADWW+W+RM+VF + FLG D+ +A W W RAEW++R++LHVHGC W C G G D DGGV D + V+D I FL IG+TA N P + +VP ++AR RGR+ELARD+R FDW D +RRY+NL NA RHT+ G YCL NG CRFGFPK R E+ ++ H L P T+ ++DWQ+I TP N EG D VNRH QLL WG NVD SPIV+ MA +YMVKY +KGESRSR+ Q L LVR + + D++RL+L I+R+VLN TTRRDMG QE+ HL +QT +V H++E++
Sbjct: 6 KFSVENGTVPNPVPDELRSLTMSEEMMISMAFPVCKVIRLAGGAHGYKGHVLSIGQDIGGFVGTLPWLPNSDEMPVIIIQPPDGGSWAGRQFKVSLERVQRALNYLMLHSPPYMDIRSRIDMDRVRRHLQDEPREDGGEIDVMRLFHTVTEEPPNPGGGDGXXXXEGNGEGARDYRGIEPMPDPVEHEERQQSFIPMPGDGRQSEAEILRQQLEHMTNYTDNGQSGAATMQYPGREAPLRED-TPWLWSMCFPTLFPDGVGDT-SQPHQRTLTDVDIVTHLMKFVDRP-EG--EAPYYRFASHRTFRYWALDMRLRKTARLRCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRYVANVPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMPRAGPEPEAGVGAGDVRPIQERNRLLIANPHIADWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSGDGEDPPGDGGVGDEDMSRVKDGISSFLCGIGFTALNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQNALPRREGEEGEGVFDPCVNRHVVAQLLGWGSNVDFSPIVDMGMAGRYMVKYTTKGESRSRDVQTTLATLVRHAATLDADDDDRLTLPSIMRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYV 777
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 3.270e-123 Identity = 216/465 (46.45%), Postives = 279/465 (60.00%), Query Frame = 1
Query: 757 IRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAA-------RHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--W-CAG------------------------GSD--ADGGVVDMEYEHVQDEIIEFLRDIGYTATN----PAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNV-------SDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLMQTPSVHHSLEFI 2010
+R+ A+ + R+FL N L V + I+QL+ ATR+ AN+ GTDGYW GKLE+ +D + S F TYSAADHH D++ L P G EP G A R+R LI NPHI DWW+W+RM+VF + FLG D+ +A W W RAEW++R++LHVHGC W C G G D DGGV D + V+D I FL IG+TA N P + +VP ++AR RGR+ELARD+R FDW D +RRY+NL NA RHT+ G YCL NG CRFGFPK R E+ ++ H L P T+ ++DWQ+I TP N EG D VNRH QLL WG NVD SPIV+ MA +YMVKY +KGESRSR+ Q L LVR + + D++RL+L I+R+VLN TTRRDMG QE+ HL +QT +V H++E++
Sbjct: 1 MRLRKTARLRCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRYVANVPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMPRAGPEPEAGVGAGDVRPIQERNRLLIANPHIEDWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSRDGEDPPGDGGVSDEDMSRVKDGISSFLCGIGFTALNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQNALPRREGEEGEGVFDPCVNRHVVAQLLGWGSNVDFSPIVDMGMAGRYMVKYTTKGESRSRDVQTTLATLVRHAATLDADDDDRLTLPSIMRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYV 465
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5K2R2_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R2_9PHAE) HSP 1 Score: 365 bits (938), Expect = 3.190e-114 Identity = 227/613 (37.03%), Postives = 309/613 (50.41%), Query Frame = 1
Query: 1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVAR-----------------------------------IEAALVWLIANNPAYRDVRMDISRIAHLG----DKEVNVIHLFDTIPADDEEEGDGDAGDSSGDPPER--QRDYQ----------------------------GPRESFIPADAPGGLSEEDDIRRALQSLT---QGGGNSTTVNYPRAGEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPC-YRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGER---EIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFP-IVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--WCAG-------------------------------GSDADGGVVDMEYEHVQDEIIEFLRDIGYTATNPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTK 1509
KFG N IP D+ L L ++E Q+I+ AHP+ + YR PGG+ Y GH +++++D+T A +E AL WLIANNPAY VR+DI + LG D E + ++ F + G G +RDY+ PRESFIP D G +ED++R L+ L GG S V++PR +PL E TP LAT CFP LFP GA + GAR R V +D +THL+KF D V+EE YRF H FAYWC++ ++ SQA+ Q R+F+N N ++ + V + +Q ++ +R+TAN+ GTDG+W G+LE AVD + + F TYSAADHHW+D+H L P D+ P R + LIDNPH+ADWW W+R++ + VFLG D+ D +W W RAEW++RASLHVHGC W G+ DGGV D E+ VQ E+ FL +G+TA NP A + V ++ R+ E +ARDMRDF W D +A RY L NA QR+T+
Sbjct: 25 KFGSGNSMIPDDLVPQLMGLTVLEQQLISMAHPIARAYRLPGGQCAYSGHILNVARDVTTFATSLPWQANSDDIPIIVIVPPGGGTWQGREFKALKNCVEIALNWLIANNPAYSSVRIDIENLDRLGRENDDTEHDHVNNFLRLRKAGPPHGAGXXXXXXXXXXXXXTRRDYRYIGAPFPARPDDDVTDPLQAAGGRTTSNTPRESFIPTDGTGETPQEDEVRACLERLAARRDGGDASARVHHPRQLDPLPEHQTPFLATKCFPCLFPRGAADPTSGARRRGVDFVDHVTHLLKFVD----AVEEERYHYRFVSHRLFAYWCMDTKVRSQARTQCRMFMNNNPHIAQMSVDEVFDNIWDNVQGIMTHMSRYTANLPGTDGFWQKEQGRLENAVDQLQSLTVFTTYSAADHHWYDLHRLMPGYKEDDDDKPTPQQRTQWLIDNPHLADWWFWQRLQEWKGVFLGRDMGDQRWQWDRAEWQSRASLHVHGCSSWIVEAVRNKHLTDLSRRYLKGFLARRRVKQGRLEEGAPTDGGVSDEEFARVQQEMCTFLVAVGFTARNPDPPAPDEAVSEEQRRAAAEGIARDMRDFPWEDEQATMERYSLLLNACQRYTR 633
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5KCP2_9PHAE (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP2_9PHAE) HSP 1 Score: 333 bits (854), Expect = 3.050e-98 Identity = 219/560 (39.11%), Postives = 283/560 (50.54%), Query Frame = 1
Query: 316 PADDEEEGDG--DAGDSSGDPPERQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGN----STTVNYPRAGEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRW--------TANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAA-------RHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--W-CAG------------------------GSD--ADGGVVDMEYEHVQDEIIEFLRDIGYTATN----PAASAEEVPVDDQARQRGREELARDMRDFDWTD----NKAY-------------------------------------------------------QRRYENLFNASQRHTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPN 1656
P + E+EGD D D+SG R +GP ESFIP G SE + +R+ L+ +T N + T+ YP PLRED TP L +MCFPTLFP G G+ R ++ +D +THL+KF D +G E P YRFA H TF YW +++R+ A+ Q R+FL N L V + I+QL+ ATR+ T GTDGYW GKLE+ +D + S F TYSAADHH D++ L G EP G A R+R LI NPHIADWW+W+RM+VF + FLG D+ +A W W RAEW+ R++LHVHGC W C G G D DGGV D + V+D I FL IG+TA N P + +VP ++AR RGR+ELARD+R FDW D + Y +RRY+NL NA RHT+ G YCL NG CRFGFPK R E+ ++ H L P T+ ++DWQ+I TP N
Sbjct: 448 PLEHEDEGDNVRDPEDASG---LAARPQRGPAESFIPMPGDGRQSEAEILRQQLEHMTNYTDNEQSGAATMQYPGQEAPLRED-TPWLWSMCFPTLFPDGVGDT-SQPHQRTLTDVDIVTHLMKFVDRP-EG--EAPYYRFASHRTFRYWSVDMRLRKTARLQCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRFRLCRRSPPTPPXPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMLRAGPEPEAGVGAGDVRPIQERNRLLIANPHIADWWIWERMQVFKKYFLGKDMANASWHWDRAEWQIRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSRDGEDPPGDGGVSDEDMSRVKDGISSFLCGIGFTAVNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHIRHGGCCLVNGRCRFGFPKPRQXELAREELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQN 999
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: UPI00109BE5C8 (uncharacterized protein LOC110237019 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE5C8) HSP 1 Score: 275 bits (702), Expect = 2.270e-75 Identity = 221/738 (29.95%), Postives = 341/738 (46.21%), Query Frame = 1
Query: 1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVA--------------------------------RIEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVIHLFDTIPADDE---EEGDGDAGDSSGDPPE-RQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGE----REIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGD-EPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGCWCAGGSDADGGVVDM-------------EYEHVQDEIIEFLRDI------GYTAT------------NPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCGR-YCL------KNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLM 1974
KF VEN+ IP VP L+ L+ VE +IARA P++++Y KPGG+R Y GH I+L Q+I ++A ++ AL WLI NNP Y DV++D + L + V L T+ +DE + + D G + +P E R + SF+P +E ++ Q L+ +++P +PL E TP LATM FPTLFP G G+ A +R V+L+D + HLIKFA+ ++ + YRFA H F+YW N+ + EQT +FL +N + L + + E + + +R+ ANI+GT+ YW L+ V + P+ F T+S+AD HW ++HCLF D E D R +++I NPHI DW+ +R++ F + +L D DAKW W R E++ R S+H HG D G+ D+ + E+V ++ + +DI TA NP + D QR +++ D D+ D L N QRHT+C YCL K CRF FP + +I+ + +N + IVT N D+ +N + + QL W N D +++H +Y+ KY +KGE RS + +A +++V + + + +++V+ RD QE MH L+
Sbjct: 627 KFSVENEMIPSPVPPQLQGLSQVEEMLIARALPIMRVYIKPGGQRGYSGHCINLPQNIKELALSLPRYPKDLSVIIVKVKGRNDSYKDVNVRRQKVTDALTWLIQNNPHYSDVQIDCIALNTLPENAVPSDLL--TVETEDEFVSDNNEPDLGPPTDNPCEDRVYNESNDMNSFLPVSQ----QQEQEVEAVRQQLS----GDEPMSWPNVEDQPLNEYQTPFLATMAFPTLFPDGKGDPTNQALIRDVTLLDRVRHLIKFAE----SINGKWVYRFASHPRFSYWAFNMIQRKRTLEQTGIFLKQNPSEAHLTIDELREMAESNDSALFLSKVSRYVANIAGTNAYWHKVKEDLKAIVTSVGTPTFFFTFSSADMHWPELHCLFHDRADLELSSQD---RRQNVICNPHIVDWFFTQRLESFVKYWL-YDTLDAKWHWYRFEYQGRGSIHCHG---TAKLKNDPGLCDLTKIALKGYLAQKFKDENVVEDSTQLNQDIVAGNEAAQTACKYVDWLLSTMNPNPPDENMWIRPDMHPCQRQYKDIPEWDMDSDYVD----------LLNMVQRHTRCSTSYCLRKKSSEKELKCRFHFPYDHCTQTKIEFEKVHSKHSNDEQYRARIVTKRN-------DSRLNNNQQLQLQGWRANCDIQVVIDHYACVEYLTKYAAKGEPRS-------PLIKQAFLSIVLNANSTSNPHKAIKKVVMKTLGERDYAAQETMHHLL 1319
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: UPI000A2A83DD (uncharacterized protein LOC110235051 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A83DD) HSP 1 Score: 266 bits (680), Expect = 1.190e-72 Identity = 212/729 (29.08%), Postives = 327/729 (44.86%), Query Frame = 1
Query: 25 IPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVA--------------------------------RIEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVIHLFDTIPADDEEEGDGDAGDSSGDPP------ERQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPM----GLVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGCWCAGGSDADGGVVDMEYEHVQDEIIEFLRDIGYTATNPAASAEEVPVDDQARQRGREELARDMRDFDWT-----------------DNKAYQRRYENL------------FNASQRHTKCG-RYCLKNGH------CRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLM 1974
IP VP L+ L+ VE +IARA P++++Y KPGG+R Y GH I+L Q++ ++A ++ AL WLI NNP Y DV++D + L D +V +D + +E D + D PP +R + SF+P G +E +I Q L +++P +PL E TP LATM FPTLFP G G+ A R VSL+D + HLIKFA+ V+ + YRFA H F+YW LN+ + EQT +FL +N + L + G+ + +R+ ANI+GT+ YW L+ V + P+ F T+S+AD HW ++H LF R +++IDNPH+ DW+ +R++ F + +L D DAKW W R E++ R S+H HG + D G+ D+ ++ + + +D N + E+ D +A G E + DW D QR+Y ++ N QRHT+C YCL+ CRF FP + +I+ + +N + IV N D+ +N + QL W N D I++H +Y+ KY +KGE RS ++ ++V+ +N + + +++V+ RD QE MH L+
Sbjct: 2 IPSPVPPQLQGLSQVEEMLIARALPIMRVYIKPGGQRGYSGHCINLPQNVKELALRLPRYSKDLSVIIVKVKGRNDTFKDVNVQRQKVHDALTWLIQNNPHYSDVQIDQEALNALPDNDVP----YDLLTVQTDETSDNNEPDLG--PPTDNHSEDRVYNESTDMSSFLPI----GEEQEQEIDAVRQQLL----GDEPMSWPTVEDQPLNEYQTPFLATMAFPTLFPDGKGDPTNQALARDVSLLDRVRHLIKFAEK----VNGKWVYRFASHPRFSYWALNMIQRKRTLEQTGIFLKQNPSESHLTIDELRGMAESNSSAVFMPKVSRYVANIAGTNAYWHKVKEDLKAIVTNVGTPTFFFTFSSADMHWPELHSLF--YDGNVSELSSQDRRQNVIDNPHLVDWFFTQRLESFIKYWLH-DTLDAKWHWYRFEYQGRGSIHCHG---TAKLNNDPGLCDLTKVALKGYLAQKFKD-----ENTVEDSTELDQDIEA---GNEATQTACKYVDWLLSTMNPNPPDEEMWIRPDVHPCQRQYNDIPEWDMDSDYVDILNMVQRHTRCSTNYCLRKKSSENELKCRFHFPFDHCSQTKIEFEKVNSKSSNEQQYRAKIVMKRN-------DSRLNNNQRLQLQGWRANCDIQVIIDHYACVEYLTKYAAKGEPRSPMLKQTFN-------SIVKNADNSSNPHKAIKKVVMKTLGERDYAAQETMHHLL 684
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6S7J0R9_PARCT (Helitron_like_N domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J0R9_PARCT) HSP 1 Score: 259 bits (663), Expect = 4.750e-72 Identity = 224/739 (30.31%), Postives = 335/739 (45.33%), Query Frame = 1
Query: 25 IPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVAR--------------------------------IEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVI-HLFDTIPAD-DEEEGDGDAGDSSGDPPERQR--------------DYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRAGE-PLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGA----ATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGCW-----------------------CAGGSDADGGVVDMEYEH-VQDEIIEFLRDIGYT--ATNPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCG-RYCLK------NGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQV---IVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLM 1974
IP VP+ L+ L +E +IARA P++K+Y KPGG+R Y GH I+L Q +TD+A+ +E AL WLI +NP Y DV++DI + VN I H I + D EE + SGD D + SF+P L E D I+ L +++P G+ PL E NTP LATM FP LFP G G+ A R++SL + + HLIKFA+ VDE+ YRFA H F+YW L++ + +Q+ +FL +N E+ L + + + GA +R+ +NI+G+ YW L+ + P+ F T+S+AD HW ++H L + P R +++I+NPH+ DW+ KR++ F + +L D DA+W W R E++ R S+H HG CA S + ++D+E + +I +++ I T P +A P ++R +D+ D D Y +L N QRHT C +YCLK N HCRF FP + ++ F+ + + + Q IVT N D +N H QL W GN D I+++ +Y+ KY +KGE RS +L A + V+ D + Q+ +++VL RD QE MHLL+
Sbjct: 2 IPSCVPEVLQGLTQIEEMLIARALPIMKVYIKPGGQRGYSGHCINLPQKVTDLAKSLPRCPKDIPVVVVTMKGKDNTFKDVVVRKNKVEQALQWLIKHNPHYHDVKIDIDLLDTFP---VNGIPHNLQVIETESDPEEISDEVISQSGDQNVLHETVDNICVENEDDVFDEKTETSSFLPQSINEQL-EHDAIQNRL---------GAKIDWPDVGDQPLNEYNTPFLATMAFPCLFPDGKGDPTNPALFREISLSNKIQHLIKFAEY----VDEKWIYRFASHPRFSYWALDMIQRKRMLQQSAIFLKQNPEESHLTINELRDMASNDSSGAFMSKRSRYVSNITGSSAYWYKVREDLKAIIACKGAPTIFFTFSSADMHWPELHML---LNSSVPNPTSEERRKNVINNPHLVDWFFTKRLESFLKHWL-YDTLDAEWHWYRYEFQARGSIHCHGTAKLKSDPGLCNLSEIALKGFLAEKCADTSKDENILLDIEQGNKATRQICDYVDSIVSTWNPLPPQNNAWTKPDIHPCKKR-----YQDVSDIDSD--------YADLLNTVQRHTHCSTKYCLKHSKDNENLHCRFKFPFDLCSKTSLN----FEQIHTKDKSVQYKANIVTKRN-------DPRLNNHQRIQLQGWRGNCDIQVIIDYHACIEYLCKYAAKGEPRSP----MLKDTFNAIMKNVKPDSDP---QKAMKKVLIRTFGDRDFSAQETMHLLL 688
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: UPI001CF4DE45 (uncharacterized protein LOC114960596 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4DE45) HSP 1 Score: 261 bits (666), Expect = 1.120e-70 Identity = 212/732 (28.96%), Postives = 327/732 (44.67%), Query Frame = 1
Query: 1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVA--------------------------------RIEAALVWLIANNPAYRDVRMDISRIAHLGDKEV-NVIHLFDTIPADDEEEGDGDAGDSSGDPPERQ-RDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGE----REIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--------WCAGGSDADGGVVDMEYEHVQDEIIEFLRDIGYTATNPAASA------------EEVPVDDQAR--------QRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCG-RYCLKNGH------CRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLM 1974
KF EN IP VP L+ L E +IARA P++++Y KPGG+R Y GH I+L Q+I D+A ++ AL+WL NNP Y+DV +++ + +L + + + +T +E + D G + +P E D S +P G + ++ L+ V +P EPL E TP+LATM FP LFP G G+ A R V + + HLIKFA+ +D + YRFA H F+YW LN+ + +QT +FL +N + L + + E + +R+ ANI+GT+ YW L+ + + P+ F T+S+AD HW ++H LF GD+ R +++I+NPHI DW+ +R++ F + +L D DAKW W R E++ R S+H HG C A G + +Y+H D + D A N AA P DD QR +++ +D D+ D L N QRHT+C YCL+ CRF FP + + R++ + +N L+ IVT N D+ +N + QL W N D +++H +Y+ KYV+KGE RS ++ +++ A + + +++V+ RD QE MH L+
Sbjct: 479 KFSKENSMIPCPVPPQLQGLTQTEEMLIARALPLMRVYIKPGGQRGYSGHCINLPQNINDLASSLPRYPKDLSVIIVSVKGKDNTFKDVNVRRQKVLDALLWLRVNNPLYKDVEINVQALEYLPINGIPSDLLTVETSDYISDEVVEPDVGPPTDNPSEDVVYDESTETSSLLPV----GEQHKQELDAIKDQLS----GKQPVPWPTLQDEPLNEYQTPYLATMAFPALFPDGKGDPTNQALRRDVPFAERIKHLIKFAE----NIDGKWVYRFASHPRFSYWALNMIQRQRTLQQTGIFLKQNPGEAHLNIDELREMAESNNSTTFMSKVSRYVANIAGTNAYWHRVKEDLKAIITNVGTPTFFFTFSSADMHWPELHALF---GDDNNTTS-EIRRQNVINNPHIVDWYFSQRLESFIKHWL-YDTLDAKWHWFRFEYQGRGSIHCHGTAKLNNDPGLCQLTELALKGYLAEKYKHEHDVVDTTKLDQDIEAGNKAAQTACQYVDWLLSTFNPNPPDDDMWIRPQVHPCQRSYKDIPEHEKDSDYID----------LLNTVQRHTRCSTNYCLRKKQNEGDLKCRFHFPFDHSPQTRLEFEKVHTK-SNELQHRAKIVTKRN-------DSRLNNNQRLQLQGWRANCDLQVVIDHYACVEYLTKYVAKGEPRSSLLKQTFNSIIQNMDATSDP-------HKAIKKVVMKTLGERDYAAQETMHHLL 1168
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6S7GPZ2_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GPZ2_PARCT) HSP 1 Score: 252 bits (644), Expect = 7.610e-68 Identity = 208/737 (28.22%), Postives = 311/737 (42.20%), Query Frame = 1
Query: 1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVA--------------------------------RIEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVIHLFDTIPADDEEEGDGDAGDSSGDPPERQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMG----LVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGCW---------------CAGGSDADGGVVDM---EYEHVQDEIIEFLRD-----IGYTATNPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCG-RYCLKN------GHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLMQTPSVHHSLEFI 2010
KF EN PG VP+ L+ L VE +I+R P++++YRK GG+R Y+GH ++L QDI ++ A++WL NNP ++++ +D I L P RQR + G + +D + +++P G + E T LATM FPTLFP G G+ AR ++L + HL+KFA+M ADG E +RFA H F YW LN++ Q Q V+L + + M +V Q+V R+ + + GT+ YW R +L ++ CP+ F T+SAAD HW D+ L + DE + R +++IDNPH+ DW+ +R++ F +L V DA+W W R E++ R S+H HGC C +++ +M ++E + ++I D I Y EE+P DD R A D DN Y L N +RHT+C YCLK CRFGFPK E + + T +E + T N D +N H L W NVD IV+ +YM KY +KGE RS+ A +L + SV+ ++ D+ + ++ + RDM QE H+L+ P V + F+
Sbjct: 145 KFSAENDMDPGTVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRKHGAEDTHQDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSL--------------------------------PEMRQRQRKQ------------GAAIQDAVNEV-----------DPLDWPSTEGNLVDEVKTDGLATMAFPTLFPYGKGDPTNRARQHGITLAEAFKHLMKFAEMLADGKFE---WRFASHPRFPYWALNMKQRHQLLSQANVYLRQYPADANMTMEELKQMVNSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWPDLQRL--LQNDEG--ASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNG-VLDAEWHWYRFEYQARGSIHCHGCAKLKNDPDIRELRYKACVAFLESETTRYEMSPDDFEFLCGDVIRQGEDAEKLLIQYVDWLVKTFNEELP-DDTWRIPDPHPSAVSATTVDNRDND-----YHRLVNTVERHTRCSPAYCLKQKRVDLLAECRFGFPKPLQEETELSLELVVGKNTKSVE--SELHTKRN-------DQRLNSHNRVMLENWRANVDLQVIVDEKACARYMAKYAAKGEPRSKSASEIL----KLSVSSLQNDDQ---VSSAFKKAMIQVAGDRDMAAQETAHMLLSLPLVGCTFSFV 796 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11798.1391.1 >prot_H-elongata_contig11798.1391.1 ID=prot_H-elongata_contig11798.1391.1|Name=mRNA_H-elongata_contig11798.1391.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=671bp KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHback to top mRNA from alignment at H-elongata_contig11798:4080..6404- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11798.1391.1 ID=mRNA_H-elongata_contig11798.1391.1|Name=mRNA_H-elongata_contig11798.1391.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2325bp|location=Sequence derived from alignment at H-elongata_contig11798:4080..6404- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11798:4080..6404- >mRNA_H-elongata_contig11798.1391.1 ID=mRNA_H-elongata_contig11798.1391.1|Name=mRNA_H-elongata_contig11798.1391.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4026bp|location=Sequence derived from alignment at H-elongata_contig11798:4080..6404- (Himanthalia elongata Himel1 dioecious)back to top |