mRNA_H-elongata_contig117837.1385.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 100 bits (250), Expect = 1.540e-21 Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 1
Query: 154 KTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVT--KTSIIPSVAGGKAVSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
K+ +GT I DLG S+ LG I+ D AGTL+ +QH YI+ + RF+ T K +P + + +SK+ P++ AEV +MR++PYRE +GALM+AA TRPDI+FA LA+ NPG H
Sbjct: 1012 KSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMP-MDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPH 1133
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A2G8SFR3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SFR3_9APHY) HSP 1 Score: 100 bits (249), Expect = 2.120e-21 Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 151 WKTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVTKTSIIPSVAGGKA-VSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
+KT L TR + DLG S+ LG +TRD A TL+ +QH YI ++ RF+ I + +SK+ P++ +V +M+++PYRE +GALM+AA TRPDI+FA LA+ ++NPG TH
Sbjct: 1225 YKTQLSTRYKLTDLGPVSWVLGIKVTRDLEARTLSLSQHSYIDSIITRFNFDDLKPISTPMDPHLQLSKTQCPESALDVARMKRVPYREAIGALMYAAMGTRPDIAFAVSTLAQYSENPGWTH 1347
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM) HSP 1 Score: 94.0 bits (232), Expect = 7.780e-21 Identity = 48/122 (39.34%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 154 KTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVTK-TSIIPSVAGGKAVSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
K L + DLG S+ LG + RDR+ L+ +Q QYI + ERF ++ T++ + G +SK+ +P+ E+ M+ +PYR+++GALM+ A TRPDIS+A LA+ + NPGP H
Sbjct: 15 KEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGH 136
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A060SV79_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SV79_PYCCI) HSP 1 Score: 96.7 bits (239), Expect = 4.530e-20 Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 154 KTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVTKTSIIPS-VAGGKAVSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
K +G + DLG S+ LG I+RD AGTL+ +QH YI + RF+ T + + + + +SK+ P++ AEV +MR++PYRE + ALM+AA TRPDI+FA LA+ PG H
Sbjct: 874 KAKIGALYKLTDLGPVSWLLGIKISRDLTAGTLSLSQHAYIDALLARFNFTDLKPVSTPMDPHQLLSKTQCPESPAEVARMRRVPYREAISALMYAALGTRPDIAFAVSTLAQFAQKPGQPH 995
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM) HSP 1 Score: 94.4 bits (233), Expect = 8.330e-20 Identity = 48/122 (39.34%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 154 KTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVTK-TSIIPSVAGGKAVSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
K L + DLG S+ LG + RDR+ L+ +Q QYI + ERF ++ T++ + G +SK+ +P+ E+ M+ +PYR+++GALM+ A TRPDIS+A LA+ + NPGP+H
Sbjct: 155 KEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSH 276
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A401GID0_9APHY (Transposon Ty5-1 protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GID0_9APHY) HSP 1 Score: 94.0 bits (232), Expect = 1.100e-19 Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 1
Query: 181 IKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVTKT-SIIPSVAGGKAVSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
++DLG + LG I RDR T++ +Q QYI M E + ++ S+ + G +SK+ +PQT E E MR++PY +GALM+ A TRPDI FA LA+ N NPGPTH
Sbjct: 54 LRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLECYGLSDCKSVSTPMDPGAELSKALAPQTQEETEYMRKVPYLSAVGALMYLAITTRPDIMFAISCLARFNANPGPTH 166
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A2R6NIC9_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NIC9_9APHY) HSP 1 Score: 92.0 bits (227), Expect = 1.150e-19 Identity = 49/125 (39.20%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 145 PKWKTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVTKT-SIIPSVAGGKAVSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
P L +R + + G Y LG HITRDR T++F+Q YI + R+ + ++I + A+SK ++ + E+M+ PYRE LGALM+A+ TRPDI++ LAK + NPGPTH
Sbjct: 27 PHLIAALRSRFELSEGGQIHYLLGMHITRDREKRTISFSQSAYINCILTRYQFDEIRTVITPMDPNVALSKEQCATSERQQEEMKNKPYREALGALMYASVGTRPDITYTVSTLAKFSQNPGPTH 151
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A8H7FC24_AGABI (Integrase catalytic domain-containing protein n=2 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7FC24_AGABI) HSP 1 Score: 95.5 bits (236), Expect = 1.170e-19 Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 148 KWKTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVT--KTSIIPSVAGGKAVSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
K K LG IKDLG A + LG I R R+ G + +Q Y + + ERF ++ K P + G +S DSP+TD E E M +PYRE+LG+LMW TRPD+SFA + L++ +NPG +H
Sbjct: 1151 KAKDELGRSYEIKDLGEAKFILGMRIERGRS-GDVRLSQRAYCERIIERFKLSDLKPRSTP-LPAGLTLSIEDSPKTDEEREDMNGVPYREVLGSLMWLQVATRPDLSFAVNMLSRFANNPGRSH 1273
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A8H7F6Y3_AGABI (Integrase catalytic domain-containing protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7F6Y3_AGABI) HSP 1 Score: 95.5 bits (236), Expect = 1.170e-19 Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 1
Query: 154 KTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVTKTSIIPSVAGGKAV-SKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
K+ LG +KDLG A++ LG I RD G++T +Q Y + + ERF + P+ V S D PQT+ E +M+ +PYRE LG+LMW TRPD+SFA + L++ +NPG H
Sbjct: 1159 KSELGRSYKLKDLGQANFILGMKIERDETTGSITLSQRAYCERILERFHMQDAKPQPTPLKPNIVLSIDDMPQTEQEKLEMKNVPYREALGSLMWLQVATRPDLSFAVNLLSRFANNPGRKH 1280
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Match: A0A4S4L7S0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L7S0_9AGAM) HSP 1 Score: 93.2 bits (230), Expect = 1.490e-19 Identity = 48/122 (39.34%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 154 KTVLGTRVAIKDLGGASYYLGCHITRDRNAGTLTFNQHQYIQTMAERFSVTK-TSIIPSVAGGKAVSKSDSPQTDAEVEKMRQIPYREILGALMWAATMTRPDISFAAHQLAKINDNPGPTH 516
K L + DLG S+ LG + RDR+ L+ +Q QYI + ERF ++ T++ + G +SK+ +P+ E+ M+ +PYR+++GALM+ A TRPDIS+A LA+ + NPGP H
Sbjct: 15 KEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGH 136 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117837.1385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig117837.1385.1 >prot_H-elongata_contig117837.1385.1 ID=prot_H-elongata_contig117837.1385.1|Name=mRNA_H-elongata_contig117837.1385.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp CGSARQLDPEPTTMGEAQASSEWPQWKRAIAREMDVQTARGVWQVVERPKback to top mRNA from alignment at H-elongata_contig117837:621..1139+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig117837.1385.1 ID=mRNA_H-elongata_contig117837.1385.1|Name=mRNA_H-elongata_contig117837.1385.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=519bp|location=Sequence derived from alignment at H-elongata_contig117837:621..1139+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig117837:621..1139+ >mRNA_H-elongata_contig117837.1385.1 ID=mRNA_H-elongata_contig117837.1385.1|Name=mRNA_H-elongata_contig117837.1385.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1038bp|location=Sequence derived from alignment at H-elongata_contig117837:621..1139+ (Himanthalia elongata Himel1 dioecious)back to top |