mRNA_H-elongata_contig117578.1373.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig117578.1373.1
Unique NamemRNA_H-elongata_contig117578.1373.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: D7FXG5_ECTSI (Arginine/serine-rich splicing factor 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG5_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 9.170e-81
Identity = 115/130 (88.46%), Postives = 128/130 (98.46%), Query Frame = 1 
Query:    4 QKIDVRMGFAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRGHRPNGPKYATRRTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSREDMKSAIRELDDTRLGGKYIRVRE 393
            +KIDVRMGFAFIEF+DRRDA++AV++MDGREFDGARIVVQPGRGHRPNGPK+ATRRTEHRIT+EGLDSHTSWQDLKDFGR+AGQVL+SDVFFR GRRWGVVEY+SR+DMK+AIR LDDTRLGGKYIRVRE
Sbjct:   30 EKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTRLGGKYIRVRE 159
[Close]
BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: A0A7S0Q5F1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5F1_9EUKA)

HSP 1 Score: 116 bits (290), Expect = 1.120e-30
Identity = 53/114 (46.49%), Postives = 81/114 (71.05%), Query Frame = 1 
Query:    4 QKIDVRMGFAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRGHRPNGPKYATRRTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSREDMKSAIR 345
            +++D++ GFAF+EF D RDAD+AV DM GR+ DG RI V+  +G R  G +   + +  RI +EGLD  TSWQDLKDFGRK G ++++DV+    +++G++EY  +ED + A++
Sbjct:   32 ERVDLKRGFAFVEFSDDRDADDAVYDMHGRDLDGRRITVEHAKGGR--GARGPAKGSGFRIKVEGLDMRTSWQDLKDFGRKVGDIMYTDVWVDGSKKFGIMEYGRKEDYEEALK 143
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BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: UPI00077A39E5 (serine/arginine-rich splicing factor 5-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A39E5)

HSP 1 Score: 118 bits (296), Expect = 1.410e-29
Identity = 65/151 (43.05%), Postives = 98/151 (64.90%), Query Frame = 1 
Query:    4 QKIDVRMGFAFIEFDDRRDADEAVSDMDGREFDGARIVVQ----PGR----GHRPNGPKYATR----------RTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWG--VVEYLSREDMKSAIRELDDTRLGGKYIRVREV 396
            +++ +++G+ F+EFDD RDAD+ V D++GRE  G R++V+    P R    G+R + P   +R          RTEHR+ +E L S  +WQDLK++  KAG+V F+D    H RR G  VVE+ S+EDMK+A+++LDDT L G+ IR++ V
Sbjct:   33 REVSIKLGYGFVEFDDPRDADDCVYDLNGRELLGERVLVEHAKNPSRTMDYGYRSSAPSSNSRPQRRGRTPPLRTEHRLAVENLSSRINWQDLKEYISKAGEVTFADA---HKRRQGEGVVEFASKEDMKNALKKLDDTELNGRRIRLKIV 180
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BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: A0A1Y1ITP1_KLENI (RNA-binding protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ITP1_KLENI)

HSP 1 Score: 117 bits (292), Expect = 1.550e-29
Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 1 
Query:   28 FAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRG--HRPNGPKYATR------RTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSREDMKSAIRELDDTRLGGKYIRVR 390
            FAF+E+DD RDAD+A+  +DG  F G R+ V+  R     P GP+   +      R + R+ IEGL   TSWQDLKDFGR+AG V ++DVF   G+  GV+EY SRED+++A+R+LD  RL G  + +R
Sbjct:   57 FAFVEYDDYRDADDAIRKLDGYTFMGGRLQVEASRPPPRMPVGPRPGQQPGGLFNRQDKRVVIEGLSERTSWQDLKDFGREAGAVAYADVFRDRGKIQGVIEYQSREDVRNAVRKLDGVRLQGNTVYLR 185
[Close]
BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: UPI001F5D1779 (serine/arginine-rich-splicing factor SR34-like n=3 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D1779)

HSP 1 Score: 115 bits (287), Expect = 7.060e-29
Identity = 65/142 (45.77%), Postives = 85/142 (59.86%), Query Frame = 1 
Query:   28 FAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRGHR-----------PNGPKYATRRTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSREDMKSAIRELDDTRLGG----KYIRVREVRRSR 408
            FAF+EF+D RDAD+A+   DG +FDG R+ V+   G R            +G + A RR+++R+ + GL S  SWQDLKD  R+AG V FSDV+   G   G+VEY + EDMK AIR+LDD+         YIRVRE    R
Sbjct:   47 FAFVEFEDPRDADDAIYGRDGYDFDGQRLRVELAHGGRGASFDRSSSYGSSGRRGAARRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGAITGIVEYTNYEDMKHAIRKLDDSEFRNAFSRSYIRVREYNTKR 188
[Close]
BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: A0A3B6FNC0_WHEAT (Uncharacterized protein n=5 Tax=Triticum TaxID=4564 RepID=A0A3B6FNC0_WHEAT)

HSP 1 Score: 114 bits (284), Expect = 9.050e-29
Identity = 64/140 (45.71%), Postives = 83/140 (59.29%), Query Frame = 1 
Query:   25 GFAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRGHRPNGPKY-------------ATRRTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSREDMKSAIRELDDTRLGGK----YIRVRE 393
            G+AF+EF+D RDAD+A+   DG +FDG R+ V+   G R     Y              +RR+E R+ ++GL S  SWQDLKD  R+AG V FSDV+   G   GVV+Y + +DMK AIR+LDDT         YIRVRE
Sbjct:   46 GYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGRAQSYSYDRPSSFSNGRRGGVSRRSEFRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATVGVVDYTNYDDMKYAIRKLDDTEFRNAFSRAYIRVRE 185
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BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: A0A087HM59_ARAAL (Uncharacterized protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HM59_ARAAL)

HSP 1 Score: 114 bits (286), Expect = 9.100e-29
Identity = 63/135 (46.67%), Postives = 85/135 (62.96%), Query Frame = 1 
Query:   25 GFAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRGH--------RPNGPKYATRRTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSREDMKSAIRELDDTRLGGK----YIRVRE 393
            G+AF+EF+D RDAD+A+   DG +FDG R+ V+   G         R +G +  +RR+++R+ + GL    SWQDLKD  RKAG V+FSDVF   G   GVV+Y + +DMK AIR+LDD+         YIRVRE
Sbjct:   47 GYAFVEFEDPRDADDAIRGRDGYDFDGCRLRVEIAHGRKGGSSSVDRYSGSRVPSRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVVFSDVFRDRGGISGVVDYSNYDDMKYAIRKLDDSEFRNAFSRAYIRVRE 181
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BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: A0A2B4SSR0_STYPI (Serine/arginine-rich splicing factor 4 n=6 Tax=Scleractinia TaxID=6125 RepID=A0A2B4SSR0_STYPI)

HSP 1 Score: 115 bits (289), Expect = 9.200e-29
Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 1 
Query:    4 QKIDVRMGFAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGR--------GHR--PNGPKYATR------RTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWG--VVEYLSREDMKSAIRELDDTRLGGKYIRVR 390
            +++ +++G+ F+EFDD RDAD+ V D++GRE  G R+VV+  R        G+R  P+      R      RTEHR+ +E L S  +WQDLK++  KAG+V F+D    H RR G  VVE+ S+EDMK+A+++LDDT L GK IR++
Sbjct:   33 REVSIKLGYGFVEFDDPRDADDCVYDLNGRELLGERVVVEHARNPSRSQDYGYRSQPSNRNNQRRGRTPPLRTEHRLAVENLSSRINWQDLKEYISKAGEVTFADA---HKRRQGEGVVEFASKEDMKAALKKLDDTELHGKRIRLK 176
[Close]
BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: A0A8C0AX14_9AVES (Uncharacterized protein n=1 Tax=Buteo japonicus TaxID=224669 RepID=A0A8C0AX14_9AVES)

HSP 1 Score: 112 bits (280), Expect = 9.860e-29
Identity = 63/144 (43.75%), Postives = 90/144 (62.50%), Query Frame = 1 
Query:    4 QKIDVRMGFAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRGHRPNG--PK----YATR-----RTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSREDMKSAIRELDDTRLGGKYIRVREVRR 402
            ++I ++ GF F+EF+D RDAD+A+ +++G+E    R+ ++  R  R  G  P+    Y +R     RTEHRI +E L S  SWQDLKD  RKAG+V + D   R+ R  GVVE+ S  DMKSA+ +LD T L G+ I++ E  R
Sbjct:   31 REIHLKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRGRFPQRFSYYQSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAH-RNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLTEDHR 173
[Close]
BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Match: A0A6P7IBI1_9TELE (serine/arginine-rich splicing factor 6-like isoform X1 n=3 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IBI1_9TELE)

HSP 1 Score: 116 bits (290), Expect = 1.000e-28
Identity = 62/150 (41.33%), Postives = 92/150 (61.33%), Query Frame = 1 
Query:    7 KIDVRMGFAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRGHRPNGPKYATR----------------RTEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSREDMKSAIRELDDTRLGGKYIRVREVRRSR 408
            ++D++ G+ F+EF+D RDAD+AV +++G+E  G R+V++  RG R +G  YA R                RTEHR+ +E L S  SWQDLKDF R+AG+V ++D         GV+E+ SR D+K AI +LD T + G+ IR+ E +  R
Sbjct:   30 EVDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGYGYAGRSSSWNRPGRDKYGPPVRTEHRLIVENLSSKCSWQDLKDFMRQAGEVTYADAHKGRANE-GVIEFRSRSDLKRAIEKLDGTDINGRKIRLVEDKHRR 178
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117578.1373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXG5_ECTSI9.170e-8188.46Arginine/serine-rich splicing factor 6 n=2 Tax=Ect... [more]
A0A7S0Q5F1_9EUKA1.120e-3046.49Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
UPI00077A39E51.410e-2943.05serine/arginine-rich splicing factor 5-like n=2 Ta... [more]
A0A1Y1ITP1_KLENI1.550e-2947.29RNA-binding protein n=1 Tax=Klebsormidium nitens T... [more]
UPI001F5D17797.060e-2945.77serine/arginine-rich-splicing factor SR34-like n=3... [more]
A0A3B6FNC0_WHEAT9.050e-2945.71Uncharacterized protein n=5 Tax=Triticum TaxID=456... [more]
A0A087HM59_ARAAL9.100e-2946.67Uncharacterized protein n=1 Tax=Arabis alpina TaxI... [more]
A0A2B4SSR0_STYPI9.200e-2944.22Serine/arginine-rich splicing factor 4 n=6 Tax=Scl... [more]
A0A8C0AX14_9AVES9.860e-2943.75Uncharacterized protein n=1 Tax=Buteo japonicus Ta... [more]
A0A6P7IBI1_9TELE1.000e-2841.33serine/arginine-rich splicing factor 6-like isofor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117578contigH-elongata_contig117578:217..1983 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.9
Seed ortholog evalue5.3e-60
Seed eggNOG ortholog2880.D7FXG5
Preferred nameNPL3
KEGG koko:K12893,ko:K12896,ko:K14651
KEGG Pathwayko03022,ko03040,ko05168,ko05202,map03022,map03040,map05168,map05202
GOsGO:0000122,GO:0000375,GO:0000377,GO:0000398,GO:0000993,GO:0001067,GO:0001069,GO:0001098,GO:0001099,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006412,GO:0006415,GO:0006417,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022411,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031369,GO:0031370,GO:0031503,GO:0031554,GO:0032268,GO:0032269,GO:0032784,GO:0032786,GO:0032968,GO:0032984,GO:0032991,GO:0033036,GO:0034243,GO:0034248,GO:0034249,GO:0034613,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042886,GO:0043043,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043242,GO:0043244,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045184,GO:0045292,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051641,GO:0051649,GO:0060255,GO:0060567,GO:0065007,GO:0070063,GO:0070717,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904594,GO:1990904,GO:2000112,GO:2000113,GO:2000804,GO:2000805,GO:2001141
EggNOG free text desc.RNA splicing
EggNOG OGsCOG0724@1,KOG0106@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSR RNA splicing protein
Ec32 orthologEc-07_003150.1
Exons4
Model size408
Cds size387
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117578.1373.1prot_H-elongata_contig117578.1373.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig117578 217..1962 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929686.0511053-CDS-H-elongata_contig117578:216..3261622929686.0511053-CDS-H-elongata_contig117578:216..326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig117578 217..326 -
1691679118.919399-CDS-H-elongata_contig117578:216..3261691679118.919399-CDS-H-elongata_contig117578:216..326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig117578 217..326 -
1622929686.0715666-CDS-H-elongata_contig117578:865..9321622929686.0715666-CDS-H-elongata_contig117578:865..932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig117578 866..932 -
1691679118.9290175-CDS-H-elongata_contig117578:865..9321691679118.9290175-CDS-H-elongata_contig117578:865..932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig117578 866..932 -
1622929686.0839787-CDS-H-elongata_contig117578:1282..14341622929686.0839787-CDS-H-elongata_contig117578:1282..1434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig117578 1283..1434 -
1691679118.9364028-CDS-H-elongata_contig117578:1282..14341691679118.9364028-CDS-H-elongata_contig117578:1282..1434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig117578 1283..1434 -
1622929686.1006625-CDS-H-elongata_contig117578:1904..19621622929686.1006625-CDS-H-elongata_contig117578:1904..1962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig117578 1905..1962 -
1691679118.9436202-CDS-H-elongata_contig117578:1904..19621691679118.9436202-CDS-H-elongata_contig117578:1904..1962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig117578 1905..1962 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929686.117428-UTR-H-elongata_contig117578:1962..19831622929686.117428-UTR-H-elongata_contig117578:1962..1983Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig117578 1963..1983 -
1691679118.9510772-UTR-H-elongata_contig117578:1962..19831691679118.9510772-UTR-H-elongata_contig117578:1962..1983Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig117578 1963..1983 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig117578.1373.1

>prot_H-elongata_contig117578.1373.1 ID=prot_H-elongata_contig117578.1373.1|Name=mRNA_H-elongata_contig117578.1373.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp
MGFAFIEFDDRRDADEAVSDMDGREFDGARIVVQPGRGHRPNGPKYATRR
TEHRITIEGLDSHTSWQDLKDFGRKAGQVLFSDVFFRHGRRWGVVEYLSR
EDMKSAIRELDDTRLGGKYIRVREVRRSR
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mRNA from alignment at H-elongata_contig117578:217..1983-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig117578.1373.1 ID=mRNA_H-elongata_contig117578.1373.1|Name=mRNA_H-elongata_contig117578.1373.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1767bp|location=Sequence derived from alignment at H-elongata_contig117578:217..1983- (Himanthalia elongata Himel1 dioecious)
TTTCAGAAAATCGACGTAAGGATGGGGTTCGCCTTTATCGAGTTTGACGA
CCGGCGCGACGCGGACGAAGCAGTCTCTGGTGAGGTATCGATAAAAGGCG
CCTTTCCGTGTTTTCGCAATGCTTGGTAGTATTTCGCGGGTTCTGTCGCG
CATACGTGTTTCGCGCGCTCGAGTGTGTTGTTTGTCACCCGTCGATTCAT
CGAAAAGGGACACGTTGGACACGTTGGTCGTGGAGCCGGAGTGATGTAGC
ATCAGAGTGGGGGGGGTGTGATTTCGGCGAAGCATGACCCCTCCTCCTTT
TGCCGTAAAAACCTAGGTTTCCTACACCTTGGGAGGGTAGACGTTTCCCA
ATCTGCTGTCATGTGCGTGGGGCCGGGGATGGCCTGGAACCACCCCCTAT
CCCTGAGTTGAAGATGTGATATTGCAGATCTTGATATCATTGGTAGATAT
AGAAGAAAAAGTGAAATCGCATCAGAGGCTAAATATTTTTTTCGCATATC
TAACGAAAAACGTGACCGCGCTGGGCACCGTGTTCCCCGCCGCTTGAAGA
CATGGACGGCCGGGAGTTTGACGGAGCCCGTATCGTAGTTCAGCCCGGTC
GAGGGCACCGCCCGAACGGCCCCAAGTATGCCACGCGCCGCACGGAGCAC
CGCATCACCATCGAAGGCCTGGATTCGCACACCAGCTGGCAGGATCTCAA
GGTACGCTTGTGTAAACCAATCGAAGTTGGCCGTCTAATTATTTTTCGTT
GTAATAGTCCGTCCGTACGCCCGTGCGCGCGTTTGCGCTTTCGCCCTTGC
CGGGCGCATCATTGAACGGCTCGTTGTCGTGGGCGTTTATGTAGGCTTCG
TTAGGCATGTATAGTCGGGTTGGTTGATCGGTTGTCGTGTCTGACGAAGC
GCGTGTGTGAGAGAGAGATATATCGCATCTTTTATGGCCTGGAGGTTCTT
CTTACCCCCCTTGATGTCTTGAATGGTCGGACCACGCCCTTCCCGCTGCC
TTGGACCTTTCCCGGGTTGGTCGGTCGGTCCGTCGATCGTTCTCCCTGCA
GGACTTTGGGCGGAAGGCTGGACAAGTGTTGTTTAGCGACGTCTTCTTCC
GCCACGGCCGTCGCTGGGGTGAGAACGCCAGAAGCCCCATCGTCCCGTCG
CGGTACCACAGTGCATTCTCGCGCTCGATTTTGTTTGATTTTTGTCGGAG
TCCAGTGCTCTCCTTTTATTTTGATGAAGGTCCATTTTTATGTGAAGAGT
TCGAGGGCGATCTTGTGTTGTTGAGAGGCACCCGTTGACACAGCTGAAGC
TACGGGTTCCGCGTGGGGTTGAAAAATAATCGAAGCAACCTGATCTGGAA
AACTCTTTTAACCTCGTAGCTTTCGTATCCTGTTGATCGCAACTGCGCGC
TCCTGACTCTTGTTTCTAGTAGGAGAGGCTCTTAGGCTTGCGGTTGGGAA
ATTTAACATCGACCGAAGAACGTAATTAAGTGCAACCTGCGCCGCGGCCG
TAACGCGATTGCTCTTGCTCCTTACCGAAAATTCATCACGGCGAACATTT
CGCCCGTGGTCTTGCCATTCGTGTTTTCTGCCGTGGCGTCAAGATATTTT
CGCCCTCTTCATATCCTCACTCTGTTCTCGTCTGATGCAAACCAAAATGC
CTCCTAGGGGTTGTGGAGTACCTGTCTCGTGAGGACATGAAGTCGGCGAT
CCGGGAACTAGACGATACCCGTCTTGGTGGGAAGTACATTCGCGTCAGGG
AGGTAAGGCGCTCCCGA
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Coding sequence (CDS) from alignment at H-elongata_contig117578:217..1983-

>mRNA_H-elongata_contig117578.1373.1 ID=mRNA_H-elongata_contig117578.1373.1|Name=mRNA_H-elongata_contig117578.1373.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=774bp|location=Sequence derived from alignment at H-elongata_contig117578:217..1983- (Himanthalia elongata Himel1 dioecious)
ATGGGGTTCGCCTTTATCGAGTTTGACGACCGGCGCGACGCGGACGAAGC
AGTCTCTGATGGGGTTCGCCTTTATCGAGTTTGACGACCGGCGCGACGCG
GACGAAGCAGTCTCTGACATGGACGGCCGGGAGTTTGACGGAGCCCGTAT
CGTAGTTCAGCCCGGTCGAGGGCACCGCCCGAACGGCCCCAAGTATGCCA
CGCGCCGCACGGAGCACCGCATCACCATCGAAGGCCTGGATTCGCACACC
AGCTGGCAGGATCTCAAGACATGGACGGCCGGGAGTTTGACGGAGCCCGT
ATCGTAGTTCAGCCCGGTCGAGGGCACCGCCCGAACGGCCCCAAGTATGC
CACGCGCCGCACGGAGCACCGCATCACCATCGAAGGCCTGGATTCGCACA
CCAGCTGGCAGGATCTCAAGGACTTTGGGCGGAAGGCTGGACAAGTGTTG
TTTAGCGACGTCTTCTTCCGCCACGGCCGTCGCTGGGGACTTTGGGCGGA
AGGCTGGACAAGTGTTGTTTAGCGACGTCTTCTTCCGCCACGGCCGTCGC
TGGGGGGTTGTGGAGTACCTGTCTCGTGAGGACATGAAGTCGGCGATCCG
GGAACTAGACGATACCCGTCTTGGTGGGAAGTACATTCGCGTCAGGGAGG
TAAGGCGCTCCCGAGGGTTGTGGAGTACCTGTCTCGTGAGGACATGAAGT
CGGCGATCCGGGAACTAGACGATACCCGTCTTGGTGGGAAGTACATTCGC
GTCAGGGAGGTAAGGCGCTCCCGA
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