mRNA_H-elongata_contig11752.1370.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: D8LLN5_ECTSI (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN5_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 2.400e-156 Identity = 263/381 (69.03%), Postives = 292/381 (76.64%), Query Frame = 1
Query: 1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDG------SSSYQEA----------SERSSVLSA-----EEDN--GRREG----PPSHPSKSK-----------SKRQEPRRKSR-----ILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
+DVQLA+DGTRKLVSVLTSGEG GKKVETVIIPMLRGPQ++PRYTVCVSSQVGCAMNCQFC+TGRLGLMANLQAAQ+VEQVL AKRYLE+VGDP PVTGVVFMGMGEPFDNYDR VMRAVKILTDPRAGVRL+ SSVTVSTVGLVP+IERFC DP N ASLA+SLH+V VRDK+IP+NRRYPLEQLSETLR HFP RSS E G SS+ A +ER S+ +E N RR+G PPS P++ + SKR+ P+RK R ILAVEYTLLGGVNDS DA R+A+WLEG+ CVVNLITFN H GTPF P+S E ++AFRRAL RG LCT RDSRGDDGMAACG
Sbjct: 189 EDVQLAADGTRKLVSVLTSGEGAGKKVETVIIPMLRGPQREPRYTVCVSSQVGCAMNCQFCFTGRLGLMANLQAAQIVEQVLVAKRYLETVGDPSPVTGVVFMGMGEPFDNYDR-VMRAVKILTDPRAGVRLKASSVTVSTVGLVPQIERFCKDPANGASLAISLHSVVDEVRDKLIPVNRRYPLEQLSETLRTHFP-RSSKPAADEPTGVALDHASSAAAPALGPKDVATGSAERKSMAGPGRKLEQETNLLARRDGAERRPPSIPTEPQQRPRSLADGGGSKREGPQRKGRRRRPRILAVEYTLLGGVNDSLGDAGRLAEWLEGVACVVNLITFNAHAGTPFSPSSPEAAEAFRRALAARGQLCTFRDSRGDDGMAACG 567
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A836CLG8_9STRA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG8_9STRA) HSP 1 Score: 301 bits (771), Expect = 5.070e-98 Identity = 162/334 (48.50%), Postives = 208/334 (62.28%), Query Frame = 1
Query: 16 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRA-GVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
A DGT KLV + G +G VETV+IPML+GPQ++ RYTVCVSSQVGCAMNCQFC+TGR+GL+ANLQAAQ+VEQV+ AKR+L +GD P+TGVVFMGMGEPFDNY+ V +AV+++T+ G+RL VTVSTVG+VP I +FC DP+ RA+LAVSLH RD ++P+N+R+ LE L + PP P+ + R+L ++YTLL GVN+S +D R+ + CVVNLITFN H GTPFR A T+ AF A+ G LCT+R+S+GDDG +ACG
Sbjct: 3 AQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYEN-VSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQP--------------------------------------------PPGTPANGQR---------RLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACG 282
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A061QU93_9CHLO (23S rRNA (Adenine2503-C2)-methyltransferase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QU93_9CHLO) HSP 1 Score: 276 bits (707), Expect = 5.740e-86 Identity = 156/337 (46.29%), Postives = 202/337 (59.94%), Query Frame = 1
Query: 4 DVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
DV ASDGTRKLV ++ G G KVE V+IP+LR ++ R T+CVSSQ+GCAMNCQFC TGR+GL NL AQ+VEQ++ A+RYL SVGD P+T VVFMGMGEP N D V+ A I P G+ + + ++VSTVGLVPE+ERFC + + A LAVSLH + VRD ++P+NRRYP+ +L +LR FP + DG+ S + R + +EY +L G+ND+ DDA R+ + LEGI +NL+ FNPH GT F ++ E FR L+ G +CTVRDSRGDD MAACG
Sbjct: 170 DVHEASDGTRKLVFRVSEGPAAGGKVEAVLIPILRSSGRKERITLCVSSQLGCAMNCQFCLTGRMGLGGNLLTAQIVEQLVEARRYLASVGDKTPITNVVFMGMGEPLHNLDA-VLAATSIFCHPM-GLHMSHNKISVSTVGLVPEMERFCRE--SSAQLAVSLHATTDEVRDWIVPVNRRYPIHELMASLRSLFPSQ---------DGAGSTR---------------------------------------RHVLIEYLMLRGINDTEDDARRLLELLEGIEAKINLLIFNPHVGTMFAASTDEQIARFRSILIQGGRVCTVRDSRGDDQMAACG 454
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A8J4CAH3_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CAH3_9CHLO) HSP 1 Score: 266 bits (679), Expect = 1.570e-81 Identity = 154/344 (44.77%), Postives = 193/344 (56.10%), Query Frame = 1
Query: 1 QDVQLASDGTRKLVSVLTSGE------GVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
Q + A DGTRKLV L GE G VETV+IPM + RYT C+S+QVGCAMNCQFCYTGR+GL+ANL AQ+VEQV+ A+RYL P+ + +VFMGMGEP NYD VM A++IL G+ L + + VSTVGLVPE+ +F A A LAVSLH + VRD ++P NRRYPL+QL LR FP + R+ + +EY LL GVND+ +DA+R+ I C+VNLI FNPH+GTPFR ++ E+ +AFR L G CTVR S+GDD MAACG
Sbjct: 180 QSIHTARDGTRKLVFALLEGEHGSPAGGTHGTVETVLIPMTNRSGQNLRYTACLSTQVGCAMNCQFCYTGRMGLLANLATAQIVEQVVEARRYLAEQSVPIRIANIVFMGMGEPLHNYDA-VMAAIEILA---TGLELSRNKIIVSTVGLVPEMRKFIAA--GTAKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALREAFP--------------------------------------------------YDKRKGDNFVVIEYVLLAGVNDTLEDAQRLLAITTDIYCLVNLIVFNPHEGTPFRRSTEESVRAFRGVFLAAGRPCTVRTSKGDDEMAACG 467
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A250XDL1_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDL1_9CHLO) HSP 1 Score: 262 bits (670), Expect = 1.650e-81 Identity = 150/338 (44.38%), Postives = 198/338 (58.58%), Query Frame = 1
Query: 1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
++V A DGTRK+ LT G G +ETV+IP++R ++ R T+C+S+QVGCAMNCQFCYTGR+GL+ NL AQ+VEQ++ AKRYL GD P+T VVFMGMGEP N + +V+ A++I+ P G+ + +TVSTVGLVPEI F + ++ LAVSLH + VRD ++P+NRR+ LE L L FP DG ED +SRI+ +EY +L GVND+ +DA R+ + L +R +NLI FNPH GT F P+ E FR L+ G +CTVRDSRGDD MAACG
Sbjct: 96 KEVVTAKDGTRKMAFKLTEGPAKGGVIETVLIPVVREAGQRCRITICLSTQVGCAMNCQFCYTGRMGLLGNLSTAQVVEQIVHAKRYLAEQGDRTPLTNVVFMGMGEPLHNME-VVLNAIEIMKCP-LGLHMSPGKLTVSTVGLVPEIREFVSR-SSKVQLAVSLHATTDEVRDWIVPVNRRHNLESLVSCLGELFP----------IDG-----------------ED-----------------------RSRIVLIEYIMLRGVNDTEEDAHRLLNLLSKVRAKINLILFNPHAGTKFLPSETEVVSRFRSILIQGGRVCTVRDSRGDDEMAACG 380
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A4D9CUA2_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUA2_9STRA) HSP 1 Score: 261 bits (666), Expect = 7.150e-81 Identity = 156/349 (44.70%), Postives = 203/349 (58.17%), Query Frame = 1
Query: 10 QLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLE-------------SVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQ-LSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
++A DGT+KLV +T G G G+ VE V+IPM+RGP+++PR+T+CVSSQ GCAM C FC+TG++GL+ +L A Q+V Q + A+R G+ P+ VVFMGMGEPFDNY V +A+ ILT+ R + L + +TVSTVGLVP I+RF + R LAVSLH + VR +PINRRYPL L +LRRHFP + A GRRE RR+ +A+EY LL GVND DAER+A EG+ CV+NLI FN H+G F PAS + ++FRR L G G L TVR+S+G + M ACG
Sbjct: 80 KIAGDGTQKLVMQVTDGPGKGQAVEAVLIPMVRGPEQRPRFTLCVSSQSGCAMACAFCHTGKMGLLTSLTAGQIVGQWVLARRLXXXXXXXXXXXXXEGETGNERPILRVVFMGMGEPFDNYAE-VTKALSILTEQRGKLLLGPNKITVSTVGLVPFIDRFVEE--TRCMLAVSLHATTDEVRSSFMPINRRYPLSSSLLPSLRRHFP-------------------------LPRAATSTGRRE----------------RRRRGPVALEYLLLAGVNDDEKDAERLAAMTEGMDCVINLIHFNSHEGADFLPASPDAIRSFRRILKGHGRLSTVRESKGAEEMGACG 384
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A2K3E0Y6_CHLRE (Radical SAM core domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E0Y6_CHLRE) HSP 1 Score: 266 bits (679), Expect = 8.130e-81 Identity = 159/360 (44.17%), Postives = 208/360 (57.78%), Query Frame = 1
Query: 16 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSAL-------------------------RKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKR--QEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
ASDGTRKLV L GE G +ETV+IP++R + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL AQ+VEQV+ A+R+L GD P+T +VFMGMGEP N + V+ A I++ G+ + + +T+STVGLVPE+ A R +A+SLH + VRD ++P+NRRY L L+ L FP A ++ E L E G + P S S S + ++ R L VEYT+L G+ND+ DDA R+AD L + C VNLI FNPHKGT F+P++ E AFR AL+ G++CT+RDSRGDD MAACG
Sbjct: 186 ASDGTRKLVFTLLGGEAAGGSIETVLIPVVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRFLAQEGDRTPLTNLVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKITISTVGLVPEMRAVLAR--TRVQVALSLHATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEEEAAIGSLXXXXXXXXXXXXXXXXXXXXXXXXXLGAAADVSSGPESERWLPPVEQLGS-DAPSSSSSGSXXXXXGKGSSKEGRSLLVEYTMLHGINDTLDDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTDEDISAFRSALIRSGMVCTIRDSRGDDEMAACG 540
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A835TBN4_CHLIN (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TBN4_CHLIN) HSP 1 Score: 266 bits (679), Expect = 8.130e-81 Identity = 158/361 (43.77%), Postives = 206/361 (57.06%), Query Frame = 1
Query: 16 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQ----------------------------EASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
ASDGTRKLV L GE G VETV+IP++R + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL AQ+VEQV+ A+R+L GD P+T +VFMGMGEP N + V+ A I++ G+ + + +T+STVGLVPE+ A R +A+SLH + VRD ++P+NRRY L L+ L FP E+ E L E G S S S + ++ R L VEYT+L G+ND+ +DA R+AD L + C VNLI FNPHKGT F+P++ E AFR AL+ +G++CT+RDSRGDD MAACG
Sbjct: 184 ASDGTRKLVFTLVGGEAAGGNVETVLIPVVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRFLAQEGDRTPLTNMVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKITISTVGLVPEMRTVLAR--TRVQVALSLHATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPESQESERWLPPVEQLGGDAPSSSRGSSSNEAGKGSSKEGRSLLVEYTMLHGINDTLEDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTDEDISAFRSALIQQGMVCTIRDSRGDDEMAACG 540
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: D8UF95_VOLCA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UF95_VOLCA) HSP 1 Score: 257 bits (656), Expect = 1.010e-80 Identity = 149/336 (44.35%), Postives = 195/336 (58.04%), Query Frame = 1
Query: 7 VQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
V A+DGTRKLV LT GE G VETV+IP++R + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL AQ+VEQV+ A+R+L G+ +T +VFMGMGEP N + V+ A I++ G+ + + VT+STVGLVPE+ A +R +A+SLH + VRD ++P+NRRY L L+ L E G+SS SR L +EYT+L G+ND+ DA R+ L + C VNLI FNPH GT F+P++ E AFR AL+ G++CT+RDSRGDD MAACG
Sbjct: 8 VARAADGTRKLVFTLTEGEAAGGSVETVLIPIVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRFLAQEGERTQLTNLVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKVTISTVGLVPEMRSVVAR--SRVQMALSLHATTDEVRDWIVPVNRRYDLATLTAAL--------------EELGNSS----------------------------------------SRSLLIEYTMLHGINDTLQDAHRLVAMLARVNCKVNLIMFNPHAGTRFQPSTEEAVTAFRSALVQAGMVCTIRDSRGDDEMAACG 285
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A835XTN2_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XTN2_9CHLO) HSP 1 Score: 263 bits (673), Expect = 6.620e-80 Identity = 163/374 (43.58%), Postives = 212/374 (56.68%), Query Frame = 1
Query: 1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFP---GRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSH-----------PSKSKSKRQ----------------------EPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
+ V A+DGTRKLV LT GE G VETV+IP++R + R T+CVSSQVGCAMNCQFC+TGR+GL+ +L AAQ+VEQV++A+R+L + GD P+T +VFMGMGEP N + V+ A +I+ G+ L + +T+STVGLVPE+ + A +R +A+SLH + VRD ++P+NRRY L L+ L FP G + T + AS G P PS S S EP R L VEYT+L GVND+ +DA R+A L + C VNLI FNPH GT FRP++ E AFR L+ GL+CT+RDSRGDD MAACG
Sbjct: 186 KQVVSAADGTRKLVFTLTEGEAKGGSVETVLIPVVRQAGLRDRLTICVSSQVGCAMNCQFCFTGRMGLLGSLSAAQIVEQVVAARRFLAAEGDRTPLTNLVFMGMGEPLHNTEA-VLTAAEIMNH-HLGLHLSYNKITISTVGLVPEMRQVAAR--SRVQMALSLHATTDEVRDWIVPVNRRYDLATLTAALEEIFPRKEGPRTPPAPTHAPADCAEPSASXXXXXXXXXXXXXSAAGEPQRWLPPLERLAPAPSTSPSSXXXXXXXXSSTPSTAAGPGPVGGWEPGSGGRSLLVEYTMLYGVNDTQEDARRLASMLSRVNCKVNLICFNPHAGTRFRPSTDEAICAFRSVLIQSGLVCTIRDSRGDDEMAACG 555 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11752.1370.1 >prot_H-elongata_contig11752.1370.1 ID=prot_H-elongata_contig11752.1370.1|Name=mRNA_H-elongata_contig11752.1370.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=339bp QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSback to top mRNA from alignment at H-elongata_contig11752:459..4714+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11752.1370.1 ID=mRNA_H-elongata_contig11752.1370.1|Name=mRNA_H-elongata_contig11752.1370.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4256bp|location=Sequence derived from alignment at H-elongata_contig11752:459..4714+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11752:459..4714+ >mRNA_H-elongata_contig11752.1370.1 ID=mRNA_H-elongata_contig11752.1370.1|Name=mRNA_H-elongata_contig11752.1370.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2034bp|location=Sequence derived from alignment at H-elongata_contig11752:459..4714+ (Himanthalia elongata Himel1 dioecious)back to top |