mRNA_H-elongata_contig11728.1352.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: D8LQF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQF1_ECTSI) HSP 1 Score: 648 bits (1671), Expect = 1.210e-230 Identity = 328/414 (79.23%), Postives = 370/414 (89.37%), Query Frame = 2
Query: 23 RWPLFSTSVQNELANALTEEAVKTIVSAMNTLPGDLLSYVMAYTPIGATARQKNAMTSGAYVVEVPEVLALDGEGMEVSVGIRTRSFFGKVQESKETVRVSFETSQPFVTAEAVKRRLMEMSRAQGRTKSTATIYKIPVGSYGGLPPNMLLNNVPHSKLARNFIYRGAADALVEAVQDPGVSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWEEGLVGEHVNFGALGDKSDVSAGDDVILVISPQNIAGYSVHQLLVDTVEEAAGRTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPYVVFARHNEGEGRGERYNPLATFDDDPDGENITPLFGRG 1264
R L +T+VQNE+A+AL++EA TI SAMN LP D+L+YVMAYTPIG TARQKNA T+GAY+V+ EV+ALDGEGM+V+ ++T+SFFGKVQESK+TVRVSF +P T+EAVKRRLMEMSR QG TKSTATIYKIPVGSYGGLP NMLLNNVPHSK+ARNFIYRGAA+ALV AV+DP V RR+KLVCTVPELNPAMDTYR+GT+LELVRELAY++ADVGLNTRILIQPSMG+G+FKSLPLALSGVM+IMQGMDWE+GLVG HVNFG LG+K DVSA DDVILVISPQ+IAGYS+H LLVDTVE A GR VVIINPNLKDRPSSGGVMQVRGRGERI+FA+SFKD+YNFRLLY SSVAFFPIKGAVMK+GP EPYVVF R N G+ +GE Y PL TFDDDPD ENITPL+G G
Sbjct: 27 RGALHATNVQNEVADALSDEAKITIASAMNGLPEDVLAYVMAYTPIGDTARQKNAFTAGAYMVDSVEVVALDGEGMDVAASVQTKSFFGKVQESKQTVRVSFGVDRPLETSEAVKRRLMEMSREQGLTKSTATIYKIPVGSYGGLPVNMLLNNVPHSKMARNFIYRGAAEALVLAVEDPTVPRRMKLVCTVPELNPAMDTYRVGTVLELVRELAYSMADVGLNTRILIQPSMGKGVFKSLPLALSGVMSIMQGMDWEDGLVGSHVNFGQLGNKDDVSAEDDVILVISPQSIAGYSIHPLLVDTVEHANGRPVVIINPNLKDRPSSGGVMQVRGRGERIAFAESFKDIYNFRLLYGSSVAFFPIKGAVMKAGPSEPYVVFDRRNTGKSKGEEYVPLGTFDDDPDAENITPLWGSG 440
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: A0A6H5J8I4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8I4_9PHAE) HSP 1 Score: 575 bits (1483), Expect = 7.100e-202 Identity = 292/372 (78.49%), Postives = 335/372 (90.05%), Query Frame = 2
Query: 23 RWPLFSTSVQNELANALTEEAVKTIVSAMNTLPGDLLSYVMAYTPIGATARQKNAMTSGAYVVEVPEVLALDGEGMEVSVGIRTRSFFGKVQESKETVRVSFETSQPFVTAEAVKRRLMEMSRAQGRTKSTATIYKIPVGSYGGLPPNMLLNNVPHSKLARNFIYRGAADALVEAVQDPGVSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWEEGLVGEHVNFGALGDKSDVSAGDDVILVISPQNIAGYSVHQLLVDTVEEAAGRTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGP 1138
R L +T+VQNE+A+AL++EA TI SA+N LP D+L+YVMAYTPIG TARQKNA T+GAYVV+ EV+A+DGEGM+V+ ++T+SFFGKVQESK+TVRV F +P T+EAVKRRLMEMSR QG TKSTATIYKIPVGSYGGLP NMLLNNVPHSK+ARNFIYRGAA+ALV+AV+DP V RR+KLVCTVPELNPAMDTYR+GT+LELVRELAY++ADVGLNTRILIQPSMGEG+FKSLPLALSGVM+IMQGMDWE+GLVG HVNFG LG+K DVSA DDVILVISPQ+IAGYS+H LLVDTVE+A GR VVIINPNLKDRPSSGGVMQVRGRGERI+FA+SFKD+YNFRLLY SSVAFFPIK +++ P
Sbjct: 80 RGALHATNVQNEVADALSDEAKITIASAINGLPEDVLAYVMAYTPIGDTARQKNAFTAGAYVVDSVEVVAVDGEGMDVAASVQTKSFFGKVQESKQTVRVPFGVDRPLETSEAVKRRLMEMSREQGLTKSTATIYKIPVGSYGGLPVNMLLNNVPHSKMARNFIYRGAAEALVQAVEDPTVPRRMKLVCTVPELNPAMDTYRVGTVLELVRELAYSMADVGLNTRILIQPSMGEGVFKSLPLALSGVMSIMQGMDWEDGLVGSHVNFGQLGNKDDVSAEDDVILVISPQSIAGYSIHPLLVDTVEQANGRPVVIINPNLKDRPSSGGVMQVRGRGERIAFAESFKDIYNFRLLYGSSVAFFPIKASLVVEKP 451
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: A0A7S2RWW2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWW2_9STRA) HSP 1 Score: 271 bits (693), Expect = 8.130e-82 Identity = 171/424 (40.33%), Postives = 239/424 (56.37%), Query Frame = 2
Query: 137 YVMAYTPIGATARQKNAMTSGAYVVEVPEVLALDGEGMEVSVGIRTRSFFGKVQ---------------------ESKETVRVSFETSQPFVTAEAVKRRLMEMSRAQGRTKSTATIYKIPVG-SYGGLPPNMLLNNVPHSKLARNFIYRGAADALVEAVQDPG--VSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWE-------EGLVGEHVNFGALGDKSDVSAG-----DDVILVISPQNIAGYSVHQLLVDTVEEAAGRTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPYVVFARHNEG--EGRG-------------ERYNPLATFDDDPDGENITPLF 1255
+V ++ + N G+ VVE + EG+ ++ +R R FFGKV +S VR +TA+ KR L+ M+R G ++TA + ++P+G S +P ++ +NNVP+S+ R F Y G DA+ EA++DP ++ R+++ PELNP+MD +R+GTLLELVRE+A LA G RI +QP MGEGIF +PL+L+GV I++ MDW+ EG+V +V FGA+G DV +G DDV +VI+PQNI GYSV LL D + +A GR V++INPNLKD SS M VRGR ER+ FA SFK +Y++R+LY +FPI G+V K+GP +PYVVF R E EG G ERY P +FDD+P + L
Sbjct: 95 FVREWSSLSKEIASANGWQRGSMVVEEAVFRDMSIEGITLACTVRRRGFFGKVTHEDMEAFVPLQDVFAPDAPEGDSDAVVRALGLRRSGSLTADEAKRVLLAMARGCGSYEATAQMMRMPIGESSYDMPDDLWVNNVPNSQSTRFFFYDGIVDAVEEALRDPDPTLTPRMQVKVVPPELNPSMDAFRVGTLLELVREIATRLACSGRRVRICVQPPMGEGIFVGMPLSLNGVRRILELMDWQSEPGEAYEGMVPNYVRFGAVG-AEDVDSGKGLAPDDVFIVIAPQNIIGYSVIPLLEDMLAQAKGRPVILINPNLKDIQSSEDRMSVRGRSERLQFAASFKTIYDYRVLYPRPSVYFPIVGSVCKAGPRQPYVVFERVEEDSTEGMGGARTPGIVAAGVRERYLPRGSFDDEPGSDEALRLL 517
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: A0A7S1BB49_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BB49_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.570e-72 Identity = 157/431 (36.43%), Postives = 230/431 (53.36%), Query Frame = 2
Query: 119 PGDLLSYVMAYTPIGATARQKNAMTSGAYVVEVPEVLALDGEG----MEVSVGIRTRS------------------FFGKVQESKETVRVSFETSQPFVTAEAVKRRLMEMSRAQGRTKSTA---TIYKIPVGSYGGLPPNMLLNNVPHSKLARNFIYRGAADALVEAVQDPG---VSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWEE-------GLVGEHVNFGALG-----------DKSDVSAGDDVILVISPQNIAGY--SVHQLLVDTVEEAAGRTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPYVVFARHNEGEGRGERYNPLATFDDDPDGENITPLFGRGD 1267
P L A+T G AR++NAMT G+Y ++ + +D G ++VS+ R R+ + E R S + + RR + GR T T+ + G GL N+ LN VPH + R + Y AA+A++ AVQ G V+ R++L C PE+NP MD+YRIGTLLELVR +A +A+ L R+ +Q SMG GIF P +LSGV ++ MDW+ G+VG++VNFG +G D + + DDV L++ PQ++ G S+ + L + V+ A R V+++NP+L DRPSS G VRGR ERI+FA+SF+ +Y+ R LY SS +FPI GA++K GP EP+V F R + + +GE Y P+ + + +PD +IT F D
Sbjct: 68 PDLLRDLATAFTSHGPLARRRNAMTRGSYALDSATLAYVDSTGASFELDVSIASRGRAPVLHRETVGIDACVDPACYRAYPHGRPEDPRSSIVHEENPTAIDTFVRRFNRLCHLVGRPSITGKMLTLGRQLGGERAGLLDNLFLNVVPHGREVRRYFYGMAAEAVLNAVQRCGNGQVTNRMQLTCLFPEMNPEMDSYRIGTLLELVRNIATVIAEQNLRVRVCVQGSMGVGIFTGTPKSLSGVSTLLNRMDWQSEEGERNAGMVGDYVNFGNVGSEHVMDTQIDADGTVLQEQDDVFLLLCPQSMVGVDASIVEPLQEMVKAAGDRPVILLNPSLVDRPSSDGQQGVRGRSERIAFAKSFQTIYHMRCLYDSSTGYFPILGAMLKRGPGEPWVAFRRRDYAQKQGEAYVPVFSMEMEPDSSDITKAFTSDD 498
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: A0A835YYF4_9STRA (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF4_9STRA) HSP 1 Score: 254 bits (649), Expect = 9.360e-71 Identity = 189/540 (35.00%), Postives = 232/540 (42.96%), Query Frame = 2
Query: 266 IRTRSFFGKVQESKETVRVSFETSQPFVTAEAVKRRLMEMSRAQGR--------------------------TKSTATIYK------------------IPVGSYGGLPPNMLLNNVPHSKLARNFIYRGAADALVEAVQDPGVSRRLKLVCTVPELN---------------------------------------------------------------------PAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWEEGLVGEHVNFGALGDKSDVSAGDDVILVISP----------QNIAGYSVHQLLVDTVEE---------------------------------------AAGRTVVIINPNLKDRPSSGGVMQVRGRGER------------------------------------------------ISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPYVVFARHNEGEGRGERYNPLATFDDDPDGENITPLF 1255
+ R+FFG+V + VRV+ ++ TAE +KR LMEMSR + +TATIY +PVGSY GLP N+ LNNVPHS+LAR FIY GA AL +A+ D SRR+ + CTVPELN A DTYR+GT+LELVRELA LAD G ++ +Q SMG GIF LPL+LSG IM+ MDW EG VG VNFG +G + V DDVI+ Q+IAG S+H L E A GR +V++NPNLKDRPSSGG+M VRGRG+ + FA SF+D ++FRL+Y +S A FPIKGAVMKSGP EPYV+F R +E G GE Y PLATFDD+P E I P F
Sbjct: 1770 VSRRTFFGRVTHEERDVRVALPWAREVTTAEGIKRCLMEMSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSAATATIYNTHPAYIPGLXXXXXXXXXMPVGSYSGLPKNLRLNNVPHSRLARAFIYHGACAALFKAIDDDSFSRRMTVRCTVPELNFEMAXXXXXXXXXXXXXGTFIYRGACAALFKAXXXXXXXXXXXXXCTVPELNFEILTAAFHDAGEPCALEAPDTYRVGTMLELVRELATGLADEGKRVKVCVQGSMGVGIFTGLPLSLSGTRAIMERMDWGEGYVGASVNFGKVGAEF-VDPEDDVIMXXXXXXXXXXXXXXQSIAGTSIHASLSAAAPEHCFSNRRHALHRRCCLRIXXXXXXXXXXXXXXXXEMARAAGGRPIVLVNPNLKDRPSSGGIMSVRGRGDSANAPCARALALVVRLISELMAECDWPPVVSDGASALASDRRRPPAEVVLEFAASFQDAFHFRLVYPASAAMFPIKGAVMKSGPNEPYVLF-RRDEVMGGGEEYVPLATFDDNPQAEQINPFF 2307
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: L1J4P9_GUITC (DUF1995 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J4P9_GUITC) HSP 1 Score: 233 bits (593), Expect = 1.830e-66 Identity = 144/382 (37.70%), Postives = 227/382 (59.42%), Query Frame = 2
Query: 167 TARQKNAMTSGAYVVEVPEVLALDGEGMEV-SVGIRTRSFFGKVQESKETVRVSFETSQPFVTAEAVKRRLMEMSRAQGRTKSTATIYKIPVGSYG-GLPPNMLLNNVPHSKLARNFIYRGAADALVEAVQDP----GVSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADV-GLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWE-------EGLVGEHVNFGALGDKSDVSAGDDVILVISPQNIAGYSVHQLLVDTVEEAAG-RTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPY-VVFARHNE---GEGRGERYNPLATFDDDPDGENITPLF 1255
TA + NA +G++ ++ +L + M + SV +RT +FFGK E ++ ++V + + A+++K R++E+ ++ +STA+I +PVGS G +P ++ LN +P + R + YR DA+ A+QD + RLK+ C PELNP MD++R+GT+LE+VRE+A + V G ++ IQ S+GEGIF +PL L+G+ +M+ MDW+ EGL+ +N V ++I+PQ++ G SV++ L VE A RTV++INP LKDRPSSG VM V+GR +RI+FA SF+++++FRLLY + FPI+GA+ + P+ +F R E GE Y P+A F ++P E IT +
Sbjct: 219 TAEKANAWMNGSFRIKSGRLLDITNSHMRIRSVVVRT-NFFGKEAEEEQEMQVDYLDGKTCDDADSLKMRIIELLQSCDLFRSTASILSMPVGSRGWSVPDHLFLNEIPCNTEIREWFYRDVCDAVQVALQDSRFLESCAGRLKIECVPPELNPEMDSFRVGTMLEMVREIAIRVGVVMGRRVKVCIQGSLGEGIFTGMPLMLNGMRRVMESMDWQARPGEMYEGLL---IN---------------VFIIIAPQSMVGASVYEPLSQMVEAAGPKRTVILINPRLKDRPSSGNVMSVQGRSQRIAFAASFREIFHFRLLYTGTTFMFPIQGALRMNMANSPFWTLFKRETTTTPDERTGESYQPIAVFAEEPKTEAITNMM 581
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: A0A7S2XNL0_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNL0_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.230e-66 Identity = 153/431 (35.50%), Postives = 224/431 (51.97%), Query Frame = 2
Query: 107 MNTLPGDLLS-YVMAYTPIGATARQKNAMTSGAYVVEVPEVLALDGEGMEVSVGIRTRSFFGKVQESKETVRVSFET-------------SQPFVT--------AEAVKRRLMEMSRAQGRTKSTATIYKIPV----GSYGGLPPNMLLNNVPHSKLARNFIYRGAADALVEAV---QDPGVSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWE-------EGLVGEHVNFGALGDKSDVSAG----------DDVILVISPQNIAGY--SVHQLLVDTVEEAAGRTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPYVVFARHNEGEGRGERYNPLATFDDDPDGENITPLF 1255
+N G+LL+ + A+T +G +KNA T G+Y +E ++ D + + + V ++ RS + T RV+F +QP + + RR+ + GR T I ++ + G L NM LN VPH++ R + Y AA+A ++AV +S R+ + PE+NP MD+YRIGTLLEL R +A LA+ L R+ +Q SMG GIF +P LSGV ++Q MDW+ EGLVG VNFGA+G + V+A DDV L++ PQN+ G S+ L + VE A R ++IINP+L D+ S+ G VRGR +R+ FA SF+ +++F+ +Y S ++FPI GAV K GP +V R + GE Y P + PDGE I F
Sbjct: 107 LNKHHGNLLANFASAFTELGTIQSKKNAFTGGSYKIEDSTIVDFDQDSITMDVTVQIRS------KEPTTERVTFLLDAYPVEGKQRQFKAQPLIPLAGEYVNPVDDFMRRVCRLCHIVGRPGDTGKIIQLGIQIGGAGVGDLKENMYLNQVPHNRYVRKYFYDMAANATLDAVIQCSKGELSNRMIMTAMFPEMNPQMDSYRIGTLLELTRSVAIKLAEQNLRVRVCVQGSMGVGIFTGIPKTLSGVSTLLQRMDWQSEEGEENEGLVGNFVNFGAVGKEHVVNAHIDSDGNPVEQDDVFLLVCPQNMLGLECSIMPTLAEMVEAAGDRPIIIINPDLVDKVSAQGQQSVRGRQDRLDFAASFQTIFHFQNIYYSGTSYFPILGAVTKFGPKLQWVAHQRRDRINNDGEVYVPALASESQPDGELIMEAF 531
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: W7TPW6_9STRA (DUF1995 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPW6_9STRA) HSP 1 Score: 228 bits (581), Expect = 8.980e-66 Identity = 143/413 (34.62%), Postives = 227/413 (54.96%), Query Frame = 2
Query: 38 STSVQNELANALTEEAVKTIVSAMNTLPGDLLS-YVMAYTPIGATARQKNAMTSGAYVVEVPEVLALDGEGMEVSVGIRTRSFFGKVQESKETVRVSFETSQPFVTAEAVKRRLMEMSRAQGRTKSTATIYKIPV--GSYGGLPPNMLLNNVPHSKLARNFIYRGAADALVEAVQDPGVSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWE-------EGLVGEHVNFGALGDKSDVSAGDDVILVISPQNIAGYSVHQLLVDTVEEAAGRTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPYVVFARHNEGEG------RGERYNPLATFDDDP 1228
+++V++E L ++ V TI +N DLL + A+ P+G + N A + + + +G+++ V + + FGK + + ++F T + V R ++ M+ G STA++YKIPV G + +P N+ +N VP R F Y A+ A++DP R+ + PE NPA DTYRIGT+LELVRELA+ G ++ +Q MGEGIFK LP++L+G I++ MDW+ EG+VG ++FG +G+ V DDV ++I+PQN+ G S+ LL +A R +++NP+L+DRPS+G VMQVRGR ER++F ++FK V+ F + + F I GAV K+G +P++ + + EG R E Y P+ + +P
Sbjct: 68 NSAVEHEGQRKLAQDLV-TIQEYLNRDHKDLLCRWARAFCPVGDEISKANFWRGDAMTILDTQCTQVRLDGLDLRVAVAEQGIFGKPKIREVDQSITFSTQRIRSRPADVIRAMISMASTIGDEDSTASLYKIPVDDGKWV-IPNNLYMNGVPWKPFTRQFFYNRIVRAVDAAIRDPSFPNRMAIKFLTPESNPAFDTYRIGTILELVRELAFHQVSCGKRVKLCVQQKMGEGIFKGLPISLNGCRFILENMDWQSKEGEEKEGVVGTQIHFGEVGEHV-VEEEDDVFILIAPQNVVGVSIIPLLEAMARKAGDRPFIVLNPSLRDRPSAGDVMQVRGREERMAFGKTFKTVFAFETQHDKGM--FKINGAVGKAGHDQPWIRYVLIDNQEGLQNVNNRREVYEPVQVTEREP 475
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: A0A1Z5KCW1_FISSO (DUF1995 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCW1_FISSO) HSP 1 Score: 223 bits (568), Expect = 1.120e-63 Identity = 123/317 (38.80%), Postives = 185/317 (58.36%), Query Frame = 2
Query: 374 LMEMSRAQGRTKSTATIYKIPVGSYGGLPPNMLLNNVPHSKLARNFIYRGAADALVEAV---QDPGVSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWE-------EGLVGEHVNFGALG-----------DKSDVSAGDDVILVISPQNIAGY--SVHQLLVDTVEEAAGRTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPYVVFARHNEGEGRGERYNPLATFDDDPDGENITPLF 1255
+++M + G+ A +++ G LP N+ LN VPH++ R + Y AA A+ EAV +S R++++ PE NP+MD+YRIGT+LE+VR +A LA+ L ++ +Q SMG GIF +P LSGV ++Q MDW+ EG++G++V FG + D + V DDV LVI+PQ++ G S+H LL V+ R +V+INP+L D+PS+ G VRGR ERI FA SF+ ++ F+ +Y S ++FPI GA+ K P PY+ R + +G GE Y P+ + PDG++I F
Sbjct: 179 IVQMPQVTGKLIQMA--FQLEGAGIGKLPENLYLNQVPHNRYVRQYFYDEAAAAVQEAVVLCSQGKLSNRMQVISMFPETNPSMDSYRIGTILEMVRAVAIRLAEENLRVKVCVQESMGVGIFTGVPKQLSGVAKLLQMMDWQSKEGEQNEGMIGDYVRFGGVAAQHVTNTIQKEDGTIVQHQDDVFLVIAPQSMVGTETSIHPLLQAMVQAVGDRPIVLINPDLTDKPSAAGQQSVRGRQERIDFANSFETIFQFQNIYVSGTSYFPILGAITKLRPSHPYIALQRRDYADGEGEIYVPVLASETKPDGQDIIATF 493
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Match: A0A7S3L9U0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9U0_9STRA) HSP 1 Score: 220 bits (561), Expect = 5.520e-63 Identity = 142/423 (33.57%), Postives = 224/423 (52.96%), Query Frame = 2
Query: 128 LLSYVMAYTPIGATARQKNAMTSGAYVVEVPEVLALDGEGMEVSVGIRTRSFFGKVQESKETVRVSF------ETSQPFVTA------------EAVKRRLMEMSRAQGRTKSTATIYKIPVGSYGG----LPPNMLLNNVPHSKLARNFIYRGAADALVEAV---QDPGVSRRLKLVCTVPELNPAMDTYRIGTLLELVRELAYALADVGLNTRILIQPSMGEGIFKSLPLALSGVMNIMQGMDWE-------EGLVGEHVNFGALG-----------DKSDVSAGDDVILVISPQNIAGY--SVHQLLVDTVEEAAGRTVVIINPNLKDRPSSGGVMQVRGRGERISFAQSFKDVYNFRLLYASSVAFFPIKGAVMKSGPLEPYVVFARHNEGEGRGERYNPLATFDDDPDGENITPLFGR 1261
L+ + A++ +G+ + N + G+Y ++ ++ LD E + + V + R GK +KE + +S E S+ + T + V RRL + G +T + ++ + G +P NM LN VPH+ R++ Y A+ A+++AV +S R+K++ PE+NPAMD+YRIGT+LE+ R + LA+ + R+ +Q SMG GIF +P L+GV ++Q MDW+ EG+VG+ VNFGA+G D + DDV ++I+PQ++ G S+ L V A R V+++NP+L D+PS+ G VRGR RI FA SF+ VY F+ +Y S ++FPI G K GP EP + + R + GE Y P+ + + P GE+I F R
Sbjct: 45 LVKFADAFSRLGSEKAKANTWSGGSYTLQEATMVDLDREKLVLDVIVEKR---GKGT-NKEQIELSLNADPVGERSRLYPTLPQVPDDEKRAPIDDVVRRLNRLCWIVGDKPTTGKLTQLAIQLGGSDLPKIPENMYLNQVPHNVYVRDYFYAQASQAILDAVVLCAQGKISNRMKIISQFPEMNPAMDSYRIGTILEMARAICMRLAEQNVRVRLCVQGSMGVGIFTGVPKQLNGVSKLIQMMDWQSEEGEPNEGMVGDFVNFGAVGPEHVKNEVKNKDGEIIQHQDDVFIIIAPQSMVGTDSSIMPALEGMVAAAGDRPVILMNPDLVDKPSATGQQSVRGRQARIDFANSFETVYQFKNIYVSGTSYFPILGCTTKLGPSEPCIAYQRRDFANNEGEIYIPVLSCETMPTGEDILAAFER 463 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11728.1352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11728.1352.1 >prot_H-elongata_contig11728.1352.1 ID=prot_H-elongata_contig11728.1352.1|Name=mRNA_H-elongata_contig11728.1352.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=422bp MSRRGRWPLFSTSVQNELANALTEEAVKTIVSAMNTLPGDLLSYVMAYTPback to top mRNA from alignment at H-elongata_contig11728:1399..6710+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11728.1352.1 ID=mRNA_H-elongata_contig11728.1352.1|Name=mRNA_H-elongata_contig11728.1352.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5312bp|location=Sequence derived from alignment at H-elongata_contig11728:1399..6710+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11728:1399..6710+ >mRNA_H-elongata_contig11728.1352.1 ID=mRNA_H-elongata_contig11728.1352.1|Name=mRNA_H-elongata_contig11728.1352.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2532bp|location=Sequence derived from alignment at H-elongata_contig11728:1399..6710+ (Himanthalia elongata Himel1 dioecious)back to top |