mRNA_H-elongata_contig11726.1349.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 194 bits (494), Expect = 6.350e-52 Identity = 121/344 (35.17%), Postives = 191/344 (55.52%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
Q+ V Y SP PS+ASI+++LA A K L H++ +QA+ A +D E+ +++P ++ + +AIYGL Q+GR W + ++ FEQ KA+ CVFRK+VD V +++V++VDDIL D+ + A L +KF K + ++ I R+ A L+I Q Y++SMVE+ DVK S+IP T G K ++ EE ++P R+A+G++MW +T +PD++ VRAVAR P + H ++ KI+ YL T++ ITY R G GL + V D++ SG + +S S+ Q + + ++EAEY+A E V
Sbjct: 812 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1147
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 194 bits (494), Expect = 6.770e-52 Identity = 121/344 (35.17%), Postives = 191/344 (55.52%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
Q+ V Y SP PS+ASI+++LA A K L H++ +QA+ A +D E+ +++P ++ + +AIYGL Q+GR W + ++ FEQ KA+ CVFRK+VD V +++V++VDDIL D+ + A L +KF K + ++ I R+ A L+I Q Y++SMVE+ DVK S+IP T G K ++ EE ++P R+A+G++MW +T +PD++ VRAVAR P + H ++ KI+ YL T++ ITY R G GL + V D++ SG + +S S+ Q + + ++EAEY+A E V
Sbjct: 1191 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1526
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 194 bits (494), Expect = 6.830e-52 Identity = 121/344 (35.17%), Postives = 191/344 (55.52%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
Q+ V Y SP PS+ASI+++LA A K L H++ +QA+ A +D E+ +++P ++ + +AIYGL Q+GR W + ++ FEQ KA+ CVFRK+VD V +++V++VDDIL D+ + A L +KF K + ++ I R+ A L+I Q Y++SMVE+ DVK S+IP T G K ++ EE ++P R+A+G++MW +T +PD++ VRAVAR P + H ++ KI+ YL T++ ITY R G GL + V D++ SG + +S S+ Q + + ++EAEY+A E V
Sbjct: 1211 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1546
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 194 bits (494), Expect = 6.890e-52 Identity = 121/344 (35.17%), Postives = 191/344 (55.52%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
Q+ V Y SP PS+ASI+++LA A K L H++ +QA+ A +D E+ +++P ++ + +AIYGL Q+GR W + ++ FEQ KA+ CVFRK+VD V +++V++VDDIL D+ + A L +KF K + ++ I R+ A L+I Q Y++SMVE+ DVK S+IP T G K ++ EE ++P R+A+G++MW +T +PD++ VRAVAR P + H ++ KI+ YL T++ ITY R G GL + V D++ SG + +S S+ Q + + ++EAEY+A E V
Sbjct: 1354 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1689
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 184 bits (468), Expect = 8.390e-49 Identity = 118/343 (34.40%), Postives = 192/343 (55.98%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGR-QGCGLCMQVNT------DSNSGAVLMLSKGA--ISWYSRMQEVTASGASEAEYVALSEAV 1002
Q+ + SP PS+ASI+++LA A K L H++ +QA+ A +D E+ +++P ++ + +AIYGL Q+GR W + ++ FEQ KA+ CVFRK+VD V +++V++VDDIL D+ + A L +KF K + ++ I R+ +A L+I Q Y++SMVE+ DVK S+IP T G K ++ ++ ++P R+AVG++MW +T +PD++ VRAVAR P + H ++ KI+ YL T++ ITY R G GL + V+ D S + L + G +S S+ + + + ++EAEY+A E V
Sbjct: 403 QITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------DKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADTEDRRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGV 738
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.550e-48 Identity = 107/296 (36.15%), Postives = 172/296 (58.11%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN 888
Q+ V Y SP PS+ASI+++LA A K L H++ +QA+ A +D E+ +++P E+ + +AIYGL Q+GR W + ++ FEQ KA+ CVFRK+VD V +++V++VDDIL D+ + A L +KF K ++ ++ I R+ L+I Q Y++SMV++ DV+ S+IP + GV K D+ E+ ++P R+A+G++MW +T +PD++ VRAVAR P + H ++ KI+ YL T++ ITY R G GL + V D++
Sbjct: 366 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDD------EKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDAS 653
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 182 bits (463), Expect = 8.570e-48 Identity = 120/338 (35.50%), Postives = 186/338 (55.03%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGR-QGCGLCMQVNT------DSNSGAVLMLSKGA--ISWYSRMQEVTASGASEAEYVA 987
Q+ V Y SP PS+ASI ++LA A K L H++ +QA A +D E+ +P ++ + +AIYGL Q+GR W + ++ FEQ KA+ CVFRK+VD V +++V++VDDIL D+ + A L +KF K + ++ I R+ A L+I Q Y++SMVE+ DVK S+IP T G K ++ EE ++P R+A+G++MW +T +PD++ RAVAR P + H ++ KI+ YL T++ ITY R G G + V+ DS SG+ L + G +S S+ Q + + ++EAEY+A
Sbjct: 921 QLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGPSVYVDASYADTEDSRSGSGLATTVGGTLVSHGSKTQGIVSLSSTEAEYIA 1251
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE) HSP 1 Score: 177 bits (449), Expect = 4.820e-47 Identity = 117/345 (33.91%), Postives = 190/345 (55.07%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMR-KFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGR---QGCGLCMQVNTD---------SNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSE 996
Q E + + + Y+PT +++S+RML A A D EL HF+ QAF++A ++ + + +PE G++ +LNK++YGL QA R W + +L + FEQ A+ C+FR V GEV +++VVHVDDI A K D+F L + +K ++++ + + A + I Q Y E + E+ V+ G IP +PT K W+ + +E + P+R VG+L+W A + +PDIA+ VRAVAR+ P H K+ + + Y + T ++ I++ R G L V D S SG V+M + GAI+W+S+ Q+ ++AEYVA+++
Sbjct: 181 QKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFA-VGTKERCDQFGKDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQQTYTEELGERYGVEWGGGIP----LPTTWKL---WDFDADEPSVEHPFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSFLGYAVRTSSFGISFQRGTVSGFSLITFVYADYASRAADRRSESGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMAD 517
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: UPI002025A47D (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025A47D) HSP 1 Score: 172 bits (435), Expect = 1.520e-45 Identity = 117/347 (33.72%), Postives = 177/347 (51.01%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*--HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEK--LDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYG-------RQGCGLCMQVNTD---SNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEA 999
QV+GV Y E +SP S+R++LA AA D E+ + + AFL + EL + PE K +V +L ++IYGLVQA R W+ F E I F Q E CV++KV G ++++VDDIL D +D A L + F +K+ + Y + I R+ + R + + Q Y++ +++K +D K +P GV S +KEEM PY A+G++M+ +PD+ V V R+ NPG+ H +V I++YL TK+ ++ YG + + D S +G V +L+ GA+SW S Q V A EAEY+A SEA
Sbjct: 90 QVQGVDYDETFSPVAKLKSVRIMLAIAAYYDYEIWQMDVKTAFLNGHLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFMQTYGEACVYKKV-SGSSVAFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFKMDQSKKGFLPVLQGVRLSSAQCPTTAKDKEEMSVIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGKEHWTAVKNILKYLKRTKDMFLVYGGDEELVVKGYVDASFDTDLDDSKSQTGYVYILNGGAVSWCSCKQSVVAGSTCEAEYMAASEA 435
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE) HSP 1 Score: 173 bits (439), Expect = 1.250e-44 Identity = 113/344 (32.85%), Postives = 184/344 (53.49%), Query Frame = 1
Query: 1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
Q+ V Y SP PS+ASI+++LA A K L H++ +QA A +D E+ +++P ++ + AIYGL Q+ R W + ++ FE+ KA+ CVFRK+VD V +++V++ DDIL D+ + A L +KF K + ++ I R+ A L+I Q Y++SM+++ DV+ S+IP T G AD E EE ++P R+A+G++MW +T +PD++ VRA AR +P H ++ ++ YL T++ ITY R G GL + V D++ SG + + S+ Q + + ++EAEY+A E V
Sbjct: 698 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGCGDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVENGFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPG------ADLGPIREDEEGGEWPVREAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVGHGSKTQSIVSLSSTEAEYIAAGEGV 1033 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11726.1349.1 >prot_H-elongata_contig11726.1349.1 ID=prot_H-elongata_contig11726.1349.1|Name=mRNA_H-elongata_contig11726.1349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp MDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEback to top mRNA from alignment at H-elongata_contig11726:7760..8761- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11726.1349.1 ID=mRNA_H-elongata_contig11726.1349.1|Name=mRNA_H-elongata_contig11726.1349.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1002bp|location=Sequence derived from alignment at H-elongata_contig11726:7760..8761- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11726:7760..8761- >mRNA_H-elongata_contig11726.1349.1 ID=mRNA_H-elongata_contig11726.1349.1|Name=mRNA_H-elongata_contig11726.1349.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig11726:7760..8761- (Himanthalia elongata Himel1 dioecious)back to top |