mRNA_H-elongata_contig117233.1347.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: A0A6H5KC18_9PHAE (PKS_ER domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC18_9PHAE) HSP 1 Score: 200 bits (508), Expect = 2.420e-61 Identity = 91/107 (85.05%), Postives = 99/107 (92.52%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
V +VGAVGICGSDVHYLKHMRCADFVV++PMVIGHEAAG+VAEVGSAV GL+ GD VALEPG+PCRLC HCK+GSYNLCE M FHATPPVHGSLARFVTHPSDFC+
Sbjct: 38 VRVRVGAVGICGSDVHYLKHMRCADFVVKQPMVIGHEAAGVVAEVGSAVRGLACGDPVALEPGVPCRLCEHCKTGSYNLCEKMEFHATPPVHGSLARFVTHPSDFCY 144
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: A0A1B6MMS1_9HEMI (ADH_N domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6MMS1_9HEMI) HSP 1 Score: 160 bits (406), Expect = 3.210e-48 Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
VL Q+ VGICGSDVHY H RCADF+++ PM++GHEA+G VA+VG V L PGDRVA+EPG+PCRLC +CK G YNLC M F ATPPVHG+L R+ TH +DFCF
Sbjct: 31 VLLQMACVGICGSDVHYWVHGRCADFILKSPMIMGHEASGTVAKVGKNVKHLKPGDRVAVEPGVPCRLCRYCKEGRYNLCYDMVFCATPPVHGNLTRYYTHAADFCF 137
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: A0A444YY10_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444YY10_ARAHY) HSP 1 Score: 160 bits (406), Expect = 2.160e-47 Identity = 74/107 (69.16%), Postives = 82/107 (76.64%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
V ++ AVGICGSDVHYLK +RCA FVVE+PMVIGHE AGI+ EVGS V L PGDRVA+EPGI C C HCK G YNLC M F ATPPVHGSLA + HP+D CF
Sbjct: 43 VRVRMKAVGICGSDVHYLKTLRCAHFVVEEPMVIGHECAGIIEEVGSEVKALVPGDRVAIEPGISCWRCDHCKQGRYNLCPDMKFFATPPVHGSLANQIVHPADLCF 149
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: A0A067EYF3_CITSI (PKS_ER domain-containing protein n=15 Tax=Citrus TaxID=2706 RepID=A0A067EYF3_CITSI) HSP 1 Score: 162 bits (411), Expect = 2.520e-47 Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
VL ++ AVGICGSDVHYLK +RCADFVV++PMVIGHE AG++ +VGS V L PGDRVALEPGI C C HCK G YNLC M F ATPPVHGSLA V HP+D CF
Sbjct: 44 VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF 150
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: UPI001920FF1B (sorbitol dehydrogenase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001920FF1B) HSP 1 Score: 159 bits (401), Expect = 2.810e-47 Identity = 75/107 (70.09%), Postives = 82/107 (76.64%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
V ++ AVGICGSDVHYLK MRCADFVV++PMVIGHE AGI+ E+GS V L PGDRVALEPGI C C CK G YNLC M F ATPPVHGSLA V HP+D CF
Sbjct: 26 VRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEIGSEVKHLVPGDRVALEPGISCWRCDLCKEGRYNLCPEMKFFATPPVHGSLAHQVVHPADLCF 132
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: A0A2Z6NCB9_TRISU (PKS_ER domain-containing protein (Fragment) n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NCB9_TRISU) HSP 1 Score: 161 bits (407), Expect = 3.120e-47 Identity = 74/107 (69.16%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
V ++ AVGICGSDVHYLK MRCADF+V++PMVIGHE AGI+ EVGS V L PGDRVA+EPGI C C HCK G YNLC M F ATPPVHGSLA + HP+D CF
Sbjct: 40 VRIRMKAVGICGSDVHYLKTMRCADFIVKEPMVIGHECAGIIEEVGSHVQNLVPGDRVAIEPGISCWRCDHCKLGRYNLCPEMKFFATPPVHGSLANRIVHPADLCF 146
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: A0A7C9CL95_OPUST (ADH_N domain-containing protein (Fragment) n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A7C9CL95_OPUST) HSP 1 Score: 159 bits (401), Expect = 3.470e-47 Identity = 74/107 (69.16%), Postives = 82/107 (76.64%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
V ++ AVGICGSDVHYLK +RCADFVV++PMVIGHE AG++ EVGS V L PGDRVALEPGI C C CK G YNLC M F ATPPVHGSLA V HP+D CF
Sbjct: 41 VRVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEEVGSEVKSLVPGDRVALEPGISCWRCNLCKDGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF 147
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: UPI001BF691EB (Uncharacterized protein n=2 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF691EB) HSP 1 Score: 160 bits (405), Expect = 3.820e-47 Identity = 76/107 (71.03%), Postives = 82/107 (76.64%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
V ++ AVGICGSDVHYLK MRCADF+V++PMVIGHE AGI+ EVGS V L PGDRVALEPGI C C CK G YNLC M F ATPPVHGSLA V HPSD CF
Sbjct: 47 VRVRMKAVGICGSDVHYLKTMRCADFIVKEPMVIGHECAGIIEEVGSEVKTLLPGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPSDLCF 153
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: A0A6V7MCU4_9HYME (ADH_N domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7MCU4_9HYME) HSP 1 Score: 155 bits (392), Expect = 3.870e-47 Identity = 67/107 (62.62%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
VL ++G VGICGSDVHYL H R DF+VEKPM+IGHE++G +A++G V L GDRVA+EPG+ CR C +CK+G YNLC+ M F ATPPVHGSL RF H +DFC+
Sbjct: 1 VLVEMGCVGICGSDVHYLVHGRIGDFIVEKPMIIGHESSGTIAKIGKNVKNLKVGDRVAIEPGVCCRTCNYCKTGRYNLCKEMIFCATPPVHGSLRRFYKHAADFCY 107
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Match: A0A2G5CSK0_AQUCA (PKS_ER domain-containing protein n=7 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CSK0_AQUCA) HSP 1 Score: 163 bits (412), Expect = 4.170e-47 Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 1 VLTQVGAVGICGSDVHYLKHMRCADFVVEKPMVIGHEAAGIVAEVGSAVLGLSPGDRVALEPGIPCRLCGHCKSGSYNLCETMAFHATPPVHGSLARFVTHPSDFCF 321
V + AVGICGSDVHYLK MRCADF+V++PMVIGHE AGI+ EVG+ V L+PGDRVALEPGI C C +CK GSYNLC M F ATPPVHGSLA V HP+D CF
Sbjct: 36 VKINMKAVGICGSDVHYLKTMRCADFIVKEPMVIGHECAGIIEEVGNEVKSLTPGDRVALEPGISCWRCSYCKDGSYNLCPDMKFFATPPVHGSLANQVVHPADLCF 142 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117233.1347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig117233.1347.1 >prot_H-elongata_contig117233.1347.1 ID=prot_H-elongata_contig117233.1347.1|Name=mRNA_H-elongata_contig117233.1347.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp MCTTSSTCGAPTLSWRSPWSSATRRPASWRRWDLRCWACLPETESPSSRAback to top mRNA from alignment at H-elongata_contig117233:3..1532- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig117233.1347.1 ID=mRNA_H-elongata_contig117233.1347.1|Name=mRNA_H-elongata_contig117233.1347.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1530bp|location=Sequence derived from alignment at H-elongata_contig117233:3..1532- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig117233:3..1532- >mRNA_H-elongata_contig117233.1347.1 ID=mRNA_H-elongata_contig117233.1347.1|Name=mRNA_H-elongata_contig117233.1347.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=516bp|location=Sequence derived from alignment at H-elongata_contig117233:3..1532- (Himanthalia elongata Himel1 dioecious)back to top |