mRNA_H-elongata_contig1166.1301.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: D8LK48_ECTSI (Possible Cdc2-related protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK48_ECTSI) HSP 1 Score: 1310 bits (3390), Expect = 0.000e+0 Identity = 760/1218 (62.40%), Postives = 873/1218 (71.67%), Query Frame = 1
Query: 385 SPTYYERLKP------WQDFELLQNNVLGPGGKAPVGPGALPTTALGKGDLDKDMEELECNCIPIG-NINAPTCYDASCHNFATMQECREGKCHPGCRNQRIQRRENAKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLNPNA----ESGGGPFARGRVKASAMGVWRTPNEGEYANPEGLIDRKVRVYFDGDCTYFEAKVMRFKPEKKKHMLLYVGEGDSINDELEEDLVGVQGKIQGIDKWQIWEESDRVVNIKKKDQTN----GTASALGGSVRWVGRQQGQQ--GDPSKMGKSTNKRRHFASRFGPQL----QLQPGKSSR--------GFQGMMA--GPPIPQRPXXXXXXXXXLPPSIGPRVAEDLLVPWKVIPQVNSDSELVRRIKGRISVHL-ELVELEDPRASQCPSSQRLLRVAGGRDQVKVAVDMLRAEVQSLRPLEEWLVAERRRKAQEAAETKDLEADANAQVNRTRQRWCIGSDWHCFSKTVVSIIANNKVVADLRRNALHVVRQVAESGAGKASNSAPLIFHASILIHRYLAIINVMSMSDTPATTVTGTAXXXXXXXXTSNGFSNKITAGTSXXXXKDXXXXXXXXANGAASVSNGSSSVSASXXXXXXXXXXXXXXXXACGAAGRFRMETNFYVLATACLLLANKSLRARVGSARPRRRDELLRAAYGVQFRGRVLEKGTAENAKWESKLAAAEMEVLMSLGFDVHVTDPLEALDQQRVQKFITAACHSKASSLVVESVTQGCSAWLRFEPDVVALSVLLLAIGITRSRDELTTRAKTLAVNAESTWPAVLACTQSLVRSLPSLGAVPDAKRRSEELATALRQVPPADPMQYPDYEPPLITAQKRLRQRRRAEDGVLDAELRTTDLLMMRKAQDRAGLHGDLGGLQGIKGMAGFGSTLASNKFVRAAIREENLVAAGLECIVPFLDPWKGFTVAGPLAGIDGGKILEVYLQRWPADKKGENSGCGLSSSGMSELALFQELHSYSAVNTGHDTLLVPLAVVMGLGMKPTGKSGASGSSSKTPPNERIGXXXXGKPEGKARDAITAEERATTANPLPPLGIGGMPMTLGSDAADMATSFAAMGTVGGDGNGER 3942
S + ++RLK WQDFELLQNNV GPG K GPGA+ GK D+ ++EE ECNC P+G + NAPTCYD CHN+ TMQECR+ GCRNQRIQ+RENA+VEVFKA+GKGMGL+++ PVSKG FIAEYVGEII RKELNKRMISSAGTRKLYMMQLGD+TYLDAKRKGGIARFVNHSCEPTCRLEQWTA+G+PRCAVF+LRAM+AGEELSFDYQWEAH LR+ TKCLCG+P CRGTIEV+NPNA ESGGGPFARGR ASAMGVWRTP EYA PE L+ RKVRVYFDGDCTYFEA+V R+KP+ K HMLLY GEG+ DELEEDL+GVQGKIQGIDKWQIWE++DRV+ IKKK+Q G + GS R G GQ G P + G RHFASRFGP L Q+QPG F GMM GP XXXXXXXXX +GPRVAE+ +VP K P V SELV RIK R +V+L ELV+ ED RA QCP+ QRLLRVAGGRDQV AVD+LRAEV S+R E+WL +R R+AQE AET+DLE A AQV+R R R CIGSDWHCFSK VV+ IA NKVVADLRRNALHVVRQV+ESG+G A NSAPLI HA IL+HRYLA++ V + ++ +T TA XXXX XXXX XXXXXXXX XXXXXX A + GR R+ETNFYVLATACLLLANKSLRARVG ARPRRR+ELLRAAYGVQFRGR +EKGTAE KWE KLAAAE+EV+++LGFD+H+ DP EALDQQR Q+ ITA CH K SLV+ESVTQGCSAWLRFEPDVVALS LLLAI T ++ +L +A+ +VNA TWPAVLACTQSL RSLPSLG DA + +A LRQVP DP QYP++E PL+ A++RL QRRRAED V D ++ TTDLLMMRKAQDRAGLHG L GFG+TLASNKFVRAAIRE+ L AAGL C++P LD WKG TV GPL G+D G+ +E+YLQRWPADKK + G SSSG++ELALFQE+HSYS +GH TLLVP AVV G G+KP K GA GSS + G G + A+E T + PLGI G+PM+LG A A+ GG+G+GE+
Sbjct: 170 SSSLFDRLKADWGRESWQDFELLQNNVPGPGTKGHGGPGAVG----GKSDMGGELEEHECNCTPVGGDPNAPTCYDDQCHNYVTMQECRKXXXXRGCRNQRIQKRENAQVEVFKADGKGMGLKVVEPVSKGQFIAEYVGEIITRKELNKRMISSAGTRKLYMMQLGDDTYLDAKRKGGIARFVNHSCEPTCRLEQWTAMGQPRCAVFSLRAMKAGEELSFDYQWEAHHLRENTKCLCGSPQCRGTIEVINPNADPNVESGGGPFARGRAPASAMGVWRTPKNDEYATPEALVGRKVRVYFDGDCTYFEAQVKRYKPDTKTHMLLYAGEGERELDELEEDLIGVQGKIQGIDKWQIWEQTDRVLKIKKKEQAGDISLGPEGSSSGSRRTNGNVNGQHPYGGPQQGGDG----RHFASRFGPPLPQMQQMQPGXXXXXXXXXXXXSFSGMMGMGGPXXXXXXXXXXXXXXXXXXPVGPRVAEEFMVPLKDTPLVYGGSELVERIKTRTAVYLLELVDEEDARAKQCPAGQRLLRVAGGRDQVSAAVDILRAEVVSMRSFEDWLAGKRHREAQEEAETRDLEDAAKAQVDRPRLRSCIGSDWHCFSKEVVAQIAANKVVADLRRNALHVVRQVSESGSGTAVNSAPLICHAGILLHRYLAVLCVSTPAEAASTATKSTAPSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXFSTATTGTAASASGGRARLETNFYVLATACLLLANKSLRARVGVARPRRREELLRAAYGVQFRGRAVEKGTAEVVKWEGKLAAAELEVMVALGFDLHLADPFEALDQQRRQQLITAECHEKTRSLVLESVTQGCSAWLRFEPDVVALSTLLLAIWSTSNQHDLLNKAQQFSVNAGGTWPAVLACTQSLARSLPSLGDKVDAG--PDGVAATLRQVPTVDPSQYPEFESPLMAAKERLSQRRRAEDAVADKQVWTTDLLMMRKAQDRAGLHGGLXXXXXXXXXXGFGATLASNKFVRAAIREDTLKAAGLSCLLPALDAWKGSTVKGPLPGVDEGRTMEIYLQRWPADKKEMDMASGFSSSGVAELALFQEMHSYSTNTSGHSTLLVPFAVVKGTGLKPPAKIGAPGSSKSSSDRNAAGKLAKGAGAAAEGVPLAADEITTAVIGMDPLGIAGVPMSLGLQQGADADPAAS---GGGEGDGEK 1365
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A7S4IVS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IVS6_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.580e-49 Identity = 99/262 (37.79%), Postives = 145/262 (55.34%), Query Frame = 1
Query: 544 CNCIPIGNINAPTCYDASCHNFATMQECREG-KCHPGCRNQRIQRRENAKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLNPNAESGGGPFARGRVKASAMGVWRTPNEGEYANPEGLIDRKVRVYFDGDCTYFEAKVMRFKPEKKKHMLLY 1326
C C P + P C D +C FA +ECR P C N+RIQRRE ++VF A KG GLR L PV +G F EYVG I +K L R LY+M L ++ Y+DA+++GGIAR++NHSCEP C++++W G R V L+ + GEELSFDYQW R TKC CG+ CRGT+E+ + ++ +G W + G +++R ++V+++G+ Y+ A V + + KH+++Y
Sbjct: 139 CGCFPDVSRRTPCCVDDTCVMFACQEECRSNCDAGPYCGNKRIQRREWKDLQVFDAGVKGRGLRALEPVKRGDFCTEYVGVAIKKKYLEDVFARYQRERMLYIMALDNDVYIDARKRGGIARYINHSCEPNCKVDRWKVRGISRACVIALQDVAVGEELSFDYQWTRKRGRAPTKCYCGSALCRGTLEMPKEST------LEDEEMETKLLGHW---SPGPRGAGRAIMNRTIKVWYEGNQEYYVADVYNYDAKTGKHLVIY 391
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A7S1G096_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G096_9STRA) HSP 1 Score: 204 bits (519), Expect = 2.980e-49 Identity = 124/317 (39.12%), Postives = 174/317 (54.89%), Query Frame = 1
Query: 583 CYDASCHNFATMQECREGKCHPG--CRNQRIQRRENAKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLNPNAESGGGPFARGRVK---------ASAMGVWRTPNEGEYANPEGLIDRKVRVYFDGDCTYFEAKVMRFKPEKKKHMLLYVGEGDSINDELEEDLVGVQGKIQGIDKWQIWEES-DRVVNIKKKDQTNGTASALGGSV 1497
C D C FA +EC C G C NQRI R++ ++VF A KG+G+R L P+ K +IAEYVG I R++++ + R LY+M L +Y+DA+ GGI RF+NHSC+P C +E+W G R VF LR +E GEEL FDYQWE H R ATKC CG CRGT+E+ + E + V+ A GVW+ + A PE L+DR VRVY++ + Y+ AKV+ + P+ H ++Y G ++ E+ ED + G +QI +E+ R+V +KK + N GGSV
Sbjct: 649 CVDHRCVLFACQEECGPN-CPAGNKCGNQRISRKQTKPLQVFDAGPKGLGVRTLVPIKKHEYIAEYVGVAIKRRKIDSLFSRYSSERMLYIMTLDRRSYIDARFVGGITRFINHSCDPNCMVERWMVRGRMRAGVFALRDIETGEELGFDYQWEKHPRRPATKCYCGMAICRGTLEMKRDDDELEEEHESLTLVEEEEGRRMDPAELEGVWKFADSR--AGPE-LVDRTVRVYYEEEHQYYVAKVVGYDPKTCLHQVVYRGGEEN---EVTEDFAKLGG-------YQILDENASRMVIRRKKKRENLKNGGSGGSV 951
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A7S2PVY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PVY0_9STRA) HSP 1 Score: 196 bits (499), Expect = 5.740e-47 Identity = 115/318 (36.16%), Postives = 160/318 (50.31%), Query Frame = 1
Query: 544 CNCIPIGNINAPTCYDASCHNFATMQECREGKCHPG---CRNQRIQRRENAKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLNPNAESGGGPFARGRVKASAMGVWRTPNEGEYANP-EGLIDRKVRVYFDGDCTYFEAKVMRFKPEKKKHMLLYVGEGDSINDELEEDLVGVQGKIQGIDKWQIWEESDRVVNIKKKDQTNGTASAL 1485
C C P + + C D +C +A +EC G PG C N+RIQR+E ++ VF A KG GL + PV KG FI EYVG + R+ L+ R LY+M L + YLDA+ +GGIAR++NHSCEP C + +W G R VF LR + GEELSFDYQW+ R T+C CG+ CRGT+E+ F G W PN + +++R ++VYFD D + A V ++ PE +H L+Y G+ + +L +KW I +E I +KD+ S L
Sbjct: 48 CFCEPDIDTESKCCIDETCALYACQEEC--GTSCPGGPLCGNKRIQRKEWKRLSVFDAGLKGRGLMVQEPVYKGEFIIEYVGVAVKRQYLDGLFARYKHERMLYIMALDGDIYLDARHRGGIARYINHSCEPNCVVHRWRVRGIIRACVFALRDIGTGEELSFDYQWDRKRGRAVTRCYCGSEKCRGTLEIPKD--------FEEVEELEELEGHWIEPNTNSSGRVGKEIMNRVIKVYFDDDGEDYVADVAQYDPESGRHQLMYRGDNADVWTDL------------STEKWMILDEEGEKYVIARKDRNYQNDSLL 343
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A7S2E5Z3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5Z3_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.610e-46 Identity = 111/324 (34.26%), Postives = 167/324 (51.54%), Query Frame = 1
Query: 517 LDKDMEELECNCIPIGNINAPTCYDASCHNFATMQECREG-KCHPGCRNQRIQRRENAKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLNPNAESGGGPFARGRVKASAMGVWRTPNEGEYANPEG------LIDRKVRVYFDGDCTYFEAKVMRFKPEKKKHMLLYVGEGDSINDEL---------EEDLVGVQGKIQGIDKWQIWEESDRVV 1440
LD++ + C C P G C DASC FA +EC+ +C C N+RI R +VF A KG GLR + + K FI EYVG + RK L+ R LY+M L N Y+DA+++GGIAR++NHSC+P C + +W G R A+F LR ++ GEELSFDYQWE R T+C C + +CRGT+E+ +V W G + P+ +++R +++YF G+ YF +V ++ KKH+++Y + + ++L EE V G+ G+ + + WEES ++
Sbjct: 431 LDRNTDP--CGCQPHGGA---CCMDASCVLFACQEECQSNCECGEYCGNKRITYRIWKDTQVFDAGVKGRGLRAMEAIKKDDFITEYVGVCVKRKYLDDLFARYKSERMLYIMALDHNIYIDARKRGGIARYINHSCDPNCVVHRWRVQGVIRAAIFALRDIQPGEELSFDYQWERKRGRALTRCYCKSATCRGTLELS--------------KVTTLEEEEWELKLSGHWVKPKSFTAGHEIVNRCIKIYFQGNHEYFVGEVSQYDDGNKKHLIVYKQDSEECWEDLRKEQWMILDEEGEKFVIGRKSGVSELRDWEESRSLI 735
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A6G0XNK9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNK9_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.880e-44 Identity = 110/302 (36.42%), Postives = 160/302 (52.98%), Query Frame = 1
Query: 526 DMEELECNCIPIGNINAPTCYDASCHNFATMQECREGKC--HPGCRNQRIQRREN-AKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTR-KLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLNPNAESGGGPFARGRVKASAMGVWRTPNEGEYANPEGLIDRKVRVYFDGDCTYFEAKVMRFKPEKKKHMLLYVGEGDSINDELEEDLVGVQGKIQGIDKWQIW 1419
+ E C+ GN +C+D C N+AT EC +C + C NQR+Q E ++E F E KG G+R+ V+ I EYVGE+IN+KEL +R + Y +QL Y+DA+ +GG RFVNHSC P C+ E+WT GE R VF LR + AGEE++FDYQW RQ KC CG P+C+G I G +V+ + G+++ P E + E L+ RK+R++ D T+ V R+ P +H + V E D+ D+ +D ++ + KWQI+
Sbjct: 34 EAEPCFCSASEDGN---ESCHDTECINYATYVECPLNQCPTNSQCCNQRLQHPELFPRLEPFMTEMKGYGVRIRDAVAALAPIGEYVGEVINQKELFRRTTALGRLEINFYYIQLAPGVYIDARNRGGFTRFVNHSCNPNCKAEKWTVNGETRLLVFALRDLSAGEEITFDYQWTVLG-RQRIKCFCGEPNCKGFI-----------GDEVEQKVEETPQGMFQDPTEDDC--DESLVGRKLRIFQRDDATFSVVIVKRYIPSTNEHEIADVMEEDNDGDDTSQDDPEIRTVVLSTLKWQIY 318
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A448Z3M2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3M2_9STRA) HSP 1 Score: 187 bits (474), Expect = 5.560e-44 Identity = 107/297 (36.03%), Postives = 161/297 (54.21%), Query Frame = 1
Query: 583 CYDASCHNFATMQECREGKCHPG--CRNQRIQRRENAKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLNPNAESGGGPFARGRVKASAMGVWRTPNEGEYANPEGLIDRKVRVYFDGDCTYFEAKVMRFKPEKKKHMLLYVGEGDSINDELEEDLVGVQGKIQGIDKWQIWEESDRVVNIKKKDQTN 1467
C D SC FA ++ECR C G C N+RIQR++ ++EVF+ E KG GLR+L V +G + EYVG+ +N+ LN A RKLY+M + ++ YLDA++ GG+AR++NHSC+P C++E+W G R AV + + AG ELSFDYQWE R TKC CGA +CR T+EV E ++ W+ P A E +++R +++ Y+ A V+++ KH+L+Y + D + ++L+ + W I +E I+KK N
Sbjct: 111 CRDLSCVLFACLEECRSN-CEAGEFCGNRRIQRKQWKQLEVFQTERKGKGLRVLEDVKQGELVTEYVGKAVNKLYLNHLFRRYATERKLYIMAITNDIYLDARKVGGVARYINHSCDPNCQVERWKVRGIMRAAVVARKDIPAGTELSFDYQWERKRGRAPTKCYCGAKNCRQTLEVSRSMEEE--------EIERRLSQHWKKPMISR-AGKE-IVNRCIKLMSKEVQEYYPADVVQYDENTGKHLLMYRHDLDEVWEDLK------------TEDWMILDEEAEQFIIRKKSTNN 384
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A0P1B474_PLAHL (Histone-lysine n-methyltransferase ashh2-like isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B474_PLAHL) HSP 1 Score: 172 bits (435), Expect = 1.300e-42 Identity = 84/192 (43.75%), Postives = 115/192 (59.90%), Query Frame = 1
Query: 544 CNCIPIGNINAPTCYDASCHNFATMQECREGKCHPG--CRNQRIQRRENAKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLN 1113
C+C+P N N +C D CHN A + EC G C G C N RIQR ++ KG+G +LL + G F+AEY+GEI+ +E R + + YMM L +DA R GG ARF+NHSC+P CR+E+W GE RCA+F R + AGEEL+FDY++++ + T+CLCGAP+CR I + N
Sbjct: 75 CSCVPPTNENEMSCLD-DCHNRAALVECIPGFCKSGDRCDNMRIQRGVMPLTQLIDCGRKGLGTKLLEDIKAGSFVAEYMGEIVTEQEYYMRRVLYHNEKHRYMMVLSGGEVIDATRMGGWARFINHSCDPNCRVEKWEVNGEERCAIFARRDIIAGEELTFDYKFQSFSKTEITECLCGAPNCRKVIGMNN 265
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A6A3NM68_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NM68_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.680e-41 Identity = 86/192 (44.79%), Postives = 113/192 (58.85%), Query Frame = 1
Query: 544 CNCIPIGNINAPTCYDASCHNFATMQECREG--KCHPGCRNQRIQRRENAKVEVFKAEGKGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRMISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTIEVLN 1113
C+C P N N C D C N A + EC +G KC C N RIQR ++ E KG+GLRLL V G F+ EY+GEI+ +E R + + YMM L +DA R GG ARF+NHSC+P C +E+W E RCA+F LR + AGEEL+FDY++E+ + T+CLCGAP+CR I + N
Sbjct: 75 CSCKPPTNENEMGCLD-DCLNRAALVECIQGFCKCADRCDNMRIQRGAMPSTQLVDCERKGLGLRLLENVKAGSFVGEYMGEIVTEQEYYMRRVLYHNEKHRYMMVLSGGEVIDATRMGGWARFINHSCDPNCGVEKWDVNSEERCAIFALRDIVAGEELTFDYKFESFSKAEITECLCGAPNCRKVIGMNN 265
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Match: A0A835Z9P9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P9_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.470e-41 Identity = 80/138 (57.97%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 715 KGMGLRLLAPVSKGHFIAEYVGEIINRKELNKRM---------ISSAGTRKLYMMQLGDNTYLDAKRKGGIARFVNHSCEPTCRLEQWTAIGEPRCAVFTLRAMEAGEELSFDYQWEAHELRQATKCLCGAPSCRGTI 1101
KG GLR+L V + EYVGE+I E KRM I +A LY+MQL N +LDAKRKGG+ARF+NHSCEPTCRL++W A G RCAVF R + AG ELSFDYQW H+ RQ TKCLCGAP+CRG I
Sbjct: 1 KGWGLRVLEDVKADQLLVEYVGEVIGPIERAKRMQEVRQHPRRIDAAS---LYVMQLAQNLFLDAKRKGGVARFINHSCEPTCRLDRWRAGGRVRCAVFAKRDLAAGTELSFDYQWGHHKARQKTKCLCGAPACRGFI 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1166.1301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1166.1301.1 >prot_H-elongata_contig1166.1301.1 ID=prot_H-elongata_contig1166.1301.1|Name=mRNA_H-elongata_contig1166.1301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1270bp MEKQELKTGETPYGRGEIGQQGVRQDRSHSHHSHRSNSSGSRYRASPSSSback to top mRNA from alignment at H-elongata_contig1166:202..15625+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1166.1301.1 ID=mRNA_H-elongata_contig1166.1301.1|Name=mRNA_H-elongata_contig1166.1301.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=15424bp|location=Sequence derived from alignment at H-elongata_contig1166:202..15625+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1166:202..15625+ >mRNA_H-elongata_contig1166.1301.1 ID=mRNA_H-elongata_contig1166.1301.1|Name=mRNA_H-elongata_contig1166.1301.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=7620bp|location=Sequence derived from alignment at H-elongata_contig1166:202..15625+ (Himanthalia elongata Himel1 dioecious)back to top |