mRNA_H-elongata_contig11654.1298.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: D7G8R3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R3_ECTSI) HSP 1 Score: 677 bits (1747), Expect = 5.790e-237 Identity = 329/482 (68.26%), Postives = 386/482 (80.08%), Query Frame = 1
Query: 1 KATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACSTTSINV---EFLGNFGPVRPMWSYNALTPGSVTTLAITADGSTVYDSDGVGYSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEVACSGHGTCDESTFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDK-TVGLGLSLARDIPVSQP---SLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKETYPVHFNSTSADLQRTLEALDTLDVVSVAFDSHRGTAICQNDSSTVASVTFITQHGDIPLLGVDASQLIDDANGG 1425
+ATAGSFVLYYEGY T+ I+YDASE D+E AL IP IQG V+V+FS+ SGACS+T+INV EFLGNFGP+RPMWS+NALT GSVTTL I ADGS++YDSD +GY+S+KGTKE+E+CSNRGICD Q+GIC+CFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGE+ACSGHGTCDES FTC CN+G TAGDCSL CPYG SWFSYPS D+AHD TECSDGG C+ ETG C+C DLFHGAACEYMICPGG D CHG R ++ + V +K + L +L R + ++ RCM+MAELA AE+ GD TDYTYG DPNEGSTWDAHR+FGC+CD Y+GYDCS+RVC +GDDPGSWGQE EVQ +TC+ATNGTFTL+FRQ ET P+ N++S DL+ TLEAL T+DVVSVAF++ G +CQ+D S VASVTF+TQHGD+PLL VDAS L+DD+NGG
Sbjct: 186 EATAGSFVLYYEGYPTTDILYDASEADIESALSAIPDIQG-VNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSFNALTAGSVTTLTIVADGSSIYDSDAIGYTSVKGTKENEDCSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEIACSGHGTCDESDFTCNCNDGWTAGDCSLRACPYGWSWFSYPSAEDKAHDKRTECSDGGFCNGETGACECADLFHGAACEYMICPGGTTDACHGHGRQFHNN---------QSVRAVLNKLNIWLRTTLNRSSLATTALFLCMSDRCMTMAELATFAEDNGDATDYTYGEDPNEGSTWDAHRIFGCYCDDGYSGYDCSERVCPVGDDPGSWGQEPEVQTMTCQATNGTFTLTFRQAETEPIPRNASSEDLKETLEALATIDVVSVAFET--GDTVCQDDGSEVASVTFVTQHGDVPLLMVDASLLVDDSNGG 655
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: A0A6H5KZZ6_9PHAE (EGF-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ6_9PHAE) HSP 1 Score: 458 bits (1179), Expect = 3.250e-154 Identity = 237/420 (56.43%), Postives = 264/420 (62.86%), Query Frame = 1
Query: 1 KATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACSTTSINV---EFLGNFGPVRPMWSYNALTPGSVTTLAITADGSTVYDSDGVGY---------------------------------------------------------------------SSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEVACSGHGTCDESTFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFG 1044
+ATAGSFVLYYEGY T+ I+YDASE D+E AL IP IQG V+V+FS+ SGACS+T+INV EFLGNFGP+RPMWS+NALT GSVTTL I ADGS++YDSD +GY +S+KGTKE+EECSNRGICD Q+GIC+CFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGE+ACS HGTCDES FTC CN+G TAGDCSL CPYG SWFSYPS D+AHD ECSDGG C+RETG C+C DLFHGAACEYMICPGG D CHG GRCM+MAELA AE+ GD TDYTYG DPNEGSTWDAHR+FG
Sbjct: 177 EATAGSFVLYYEGYPTTDILYDASEADIESALSAIPDIQG-VNVKFSIPFSGACSSTAINVIQVEFLGNFGPLRPMWSFNALTAGSVTTLTIVADGSSIYDSDVIGYVRHTGGFRRPVKYHDKGMLHTCNVYLGCVLTPREQALTPYFHLLFNSSRLTCLSCRATSFTTPSHWNRYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEIACSSHGTCDESDFTCDCNDGWTAGDCSLRACPYGWSWFSYPSAEDKAHDKRAECSDGGYCNRETGACECADLFHGAACEYMICPGGTTDACHGH---------------------------------------------GRCMTMAELATFAEDNGDATDYTYGEDPNEGSTWDAHRIFG 550
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: A0A7S2D5U1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5U1_9STRA) HSP 1 Score: 406 bits (1044), Expect = 1.410e-131 Identity = 211/483 (43.69%), Postives = 287/483 (59.42%), Query Frame = 1
Query: 4 ATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACSTTSINV---EFLGNFGPVRPMWSY-NALTPGSVTTLAITADGSTVY-DSDGVGYSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEVACSGHGTCDES----TFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKETYPVHFNSTSADLQRTLEALDTLDVVSVAFDSHRGTAICQNDSS-----TVASVTFITQHGDIPLLGVDASQLID 1410
AT GSF Y G T +I A E+ + DAL+T P I V V FS+ + AC T ++N+ EF NFG + P+ Y + L+ G T+ ++ DGST DSDG Y S+ G KE++ECS RG+C DG C C+ +N D + SSDGY GTRGDCGY TTT+ CPG+VACS HG CD++ T++C C++G T GDC+ CPYG +WF YPS ++ H + ECS+GG CDR TGMC CGD ++GAAC+YM+C GG + C+G G+CMSM+ELAL A++ GD TDY YG DPN+ STWDA R++GC CDY +TGYDCS+ C +GDDPG++GQ +E+Q + C A G F LSFRQ+ET + +N+++ ++R LE L + ++V + G C D + V + FIT+HGD+P + VD S L+D
Sbjct: 212 ATGGSFAFLYLGEYTDTIKAKAGEVAIADALMTHPRIST-VSVSFSITNGTACQTDAVNIVTIEFEQNFGDLSPLVPYTDDLSTGG--TITMSTDGSTALTDSDGTSYVSVTGDKENDECSGRGLCIASDGTCSCYDTNSDTYYSSDGYGNTGTRGDCGYPATTTSTCPGDVACSAHGVCDDNDDDATYSCSCSDGYTGGDCAQRECPYGLAWFWYPSEDEVTHTEMVECSNGGTCDRSTGMCTCGDAYYGAACDYMMCGGGTTNACNGH---------------------------------------------GQCMSMSELALNADDNGDETDYEYGTDPNDASTWDASRIYGCKCDYGWTGYDCSEMECPLGDDPGTYGQYNELQLMQCTANAGNFKLSFRQEETKTIAYNASAEVVERKLEELFGIYDLTVTYSY--GNEFCITDDTDDATLNVVQIQFITEHGDLPKITVDDSNLVD 644
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: A0A835YWB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB3_9STRA) HSP 1 Score: 388 bits (997), Expect = 3.870e-124 Identity = 219/478 (45.82%), Postives = 270/478 (56.49%), Query Frame = 1
Query: 13 GSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACSTTSIN-----VEFLGNFGPVRPMWSYN-ALTP---GSVTTLAIT--ADGSTVYDSDGVG-YSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEVACSGHGTCDESTFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKETYPVHFNSTSADLQRTLEALDT-LDVVSVAFDSHRGTAICQ-NDSSTVASVTFITQHGDIPLLGVDASQL 1404
G+F L Y+ + SI DAS DV ALL I I+ S GAC+ T ++ VEF NFG +RPMW + ALTP GSVT A+T ADGS++ D G G + SIKGTKE ECSNRG+CD + G+C CF +NDDIFA SDGY GPG R DCG+ VT GCPGE+ACSGHG CD TF+C C G TAGDCS C YG SWF+YP+ +D AHD ECSD G+CDRE G+C+CGDLF G ACEYM+CP D Q S G+C+SMA+LAL A G T +YGA N+ TWDA VFGC CD Y G+DC+ R C GDD S+ Q EVQ + C A G L+FR T + F++ +A L+ LEAL T L V+V + + +C + ++ VTF+T HGD+P L D S L
Sbjct: 200 GAFALVYKDERSGSIAADASAADVRSALLKITSIRDVKVTFLSDPTKGACARTLVDEQVIAVEFTQNFGALRPMWGISTALTPPLGGSVTDPAVTVIADGSSIVDFYGNGPFYSIKGTKEGAECSNRGLCDRESGVCSCFDTNDDIFAGSDGYGGPGLRADCGHAVTAIGGCPGEIACSGHGACDAVTFSCNCQEGWTAGDCSQRACAYGWSWFAYPTADDVAHDTWAECSDAGICDRERGLCRCGDLFTGGACEYMVCPA--------------------------------------------DKQGQQCSGHGQCLSMAQLALDATADGVATAISYGASANDARTWDARSVFGCACDDGYAGHDCALRRCPRGDDAMSYAQAPEVQLLRCAAAGGALRLTFRSATTATIRFDANAAALEAALEALPTILGDVAVTYSAGAAAPLCAASAAANTVLVTFLTAHGDVPALSADTSAL 633
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: A0A812RSS9_SYMMI (TNC protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RSS9_SYMMI) HSP 1 Score: 377 bits (968), Expect = 1.800e-121 Identity = 203/480 (42.29%), Postives = 273/480 (56.88%), Query Frame = 1
Query: 1 KATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACST--TSINVEFLGNFGPVRPMWSYNALT-PGSVTTLAITADGSTVYDS-DGVGYSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCG-YQVTTTAGCPGEVACSGHGTCD--ESTFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKETYPVHFNSTSADLQRTLEALDTLDVVSVAFDSHRGTAICQNDSSTVASVTFITQHGDIPLLGVDASQLIDDAN 1419
+AT G+FVL+Y+G + ++ Y A+ +E+AL IP++ V V FS AC+ I +EFL FG + P+ + T S ++ ++ADG T +D DG+ + S+KGTKE E+C+ RG CD G C C+ +N D + SS+GY PGTRGDCG ++ T + CPG + CSGHG C+ + T+ C C+ G T GDCS CP G SW SYPS +++AHD +T CSD GLCD+E+G CKC F+G ACEYM C GG DPC G GRCMSM ELA+ + GD T+++YG DPN TWD HRVFGC CD YTGYDCS R C GDDPG++ EVQ + C A G F L FRQ+ T + +N+T ++Q L +DTL ++VAF + GTA C + V+F T H D+P L ++L+DD N
Sbjct: 97 RATMGTFVLFYKGLPSKTLSYTATVEQIEEALEHIPLVTD-VTVTFSQPSMSACNVDVNVIQIEFLEQFGALVPLVAETDSTMKQSGGSIRVSADGVTCFDDKDGIIFKSVKGTKEAEDCAGRGACDASQGFCSCYDTNGDAYFSSNGYGEPGTRGDCGAFKANTVSSCPGLLQCSGHGLCESGDGTYRCSCSEGWTGGDCSERECPKGLSWTSYPSEDNKAHDKYTVCSDMGLCDKESGTCKCQAAFYGQACEYMACGGGREDPCSGH---------------------------------------------GRCMSMNELAVWDDENGDKTEFSYGLDPNNPHTWDGHRVFGCKCDMGYTGYDCSLRECPRGDDPGTYDDHVEVQVLRCIADGGRFKLGFRQENTEWLAWNATEVEVQTALVNIDTLSDLTVAFIN--GTAACNVTGNVFMVVSFDTNHADLPALKRHINELVDDTN 528
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: F0YJI0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJI0_AURAN) HSP 1 Score: 379 bits (972), Expect = 3.490e-121 Identity = 209/473 (44.19%), Postives = 259/473 (54.76%), Query Frame = 1
Query: 4 ATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACSTTSIN---VEFLGNFGPVRPMWSYNALTPGSVTTLAITADGSTVY-DSDGVGYSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEVACSGHGTCDESTFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKETYPVHFNSTSADLQRTLEALDTLDVVSVAFDSHRGTAICQNDSSTVASVTFITQHGDIPLLGVDASQLID 1410
AT+G FVL G T I +D A L V V FS+ + AC SIN +EF NFG + P+ + G+VT I+ DG T+ D+ Y S+KGTKEDE+CSNRG+CD C C +N D ++SSDGY G RGDCG+ VTT CPG+VACS HG CD ++ C C +G DCSL +CP G +WFSYPS + AHD+ ECS GG+CD G+C CG F GAACEY+ CPGG C G GRC SMAELAL A + GD + YGADPN G TWDA+RVFGC CD + GYDCS R+C+ GDDP ++GQ +EVQ C+ T GTF L FRQK T + FN+T DL+ +EAL+T+ V V F + T + V SVTF T+HGDIP + D S L D
Sbjct: 188 ATSGKFVLLLHGKPTGDIR-KGMHIDQFMAALQESEAIDAVSVTFSVDNGTACQEDSINAISIEFTQNFGSLPPLIAVTDNLEGTVT---ISGDGVTILRDTANFEYLSVKGTKEDEQCSNRGLCDPFSATCTCMNTNSDTYSSSDGYGNEGDRGDCGHAVTTINECPGDVACSNHGVCDVISYRCACEDGWFGADCSLRSCPLGLAWFSYPSEANLAHDEWVECSGGGICDYTLGLCTCGAQFSGAACEYLACPGGSATACTGH---------------------------------------------GRCASMAELALAATDNGDASPRIYGADPNSGLTWDANRVFGCDCDGGWAGYDCSLRICSFGDDPNTYGQTNEVQLFECEGTGGTFRLIFRQKATLEIPFNTTRDDLETLIEALNTITDVDVVFSNGNSTCTDSSLGYNVVSVTFNTEHGDIPSMTADTSLLYD 611
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: A0A7S4E5E8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5E8_9STRA) HSP 1 Score: 362 bits (930), Expect = 6.600e-115 Identity = 203/473 (42.92%), Postives = 259/473 (54.76%), Query Frame = 1
Query: 4 ATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACSTTSINV---EFLGNFGPVRPMWSYNALTPGSVTTLAITADGSTVY-DSDGVGYSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEVACSGHGTCDESTFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKETYPVHFNSTSADLQRTLEALDTLDVVSVAFDSHRGTAICQNDSSTVASVTFITQHGDIPLLGVDASQLID 1410
AT G+FVL G+A+ I E ++ AL I VDV +S+ + AC+T S+NV EF +FG + P+ + G T+ ++ADG TV+ DS G + S KGTKEDEECSNRGIC+ D C C +N D F SSDGY G RGDCG+ T CPG ACSG G CD ST+ C C G T DCSL TCP G +WFSYPS ++ HD CS G CD G C C F G ACE++ CPGG+ + C+ KH GRC +M E+AL+A + GD+ YG+DPN G+TWDA R++GC CD +TGYDCS+R C GDDP ++GQ +EVQ C T GT TLSFRQK T P+ +N++ +L+ LE L + V V F S T S +V F+T+HGD+P L D SQL D
Sbjct: 186 ATGGTFVLLMAGHASGDIRTGMKEHQLKAALEQSAAITE-VDVTYSIDNGTACTTDSVNVVRIEFTQDFGSLPPLVPLDDDLAG---TIQVSADGQTVFTDSLGADFVSKKGTKEDEECSNRGICNPFDATCLCLDTNGDTFKSSDGYGNEGNRGDCGFAATAIDECPGMTACSGAGICDLSTYRCSCAKGFTGADCSLRTCPKGLAWFSYPSEDNVGHDVLEVCSGAGTCDTTKGECACAVPFTGNACEFIQCPGGLTNECN------KH---------------------------------------GRCATMREMALLATSNGDSDPRLYGSDPNNGNTWDADRIYGCICDEGWTGYDCSERECTYGDDPNTYGQVNEVQLFECAGTAGTLTLSFRQKTTLPIAYNASRQELEEALEWLTNIGDVIVLFSSGNSTCTDIGLSVNAVTVAFVTEHGDLPDLSADTSQLFD 609
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: A0A7S3XN04_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN04_HETAK) HSP 1 Score: 361 bits (927), Expect = 1.420e-114 Identity = 209/476 (43.91%), Postives = 266/476 (55.88%), Query Frame = 1
Query: 4 ATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACSTTSINV---EFLGNFGPVRPMWSY-NALTPGSVTTLAITADGSTVYDSDGVGYSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEVACSGHGTCDEST--FTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKETYPVHFNSTSADLQRTLEALDTLDVVSVAFDSHRGTAIC---QNDSSTVASVTFITQHGDIPLLGVDASQL 1404
A+ GSFVLYY G + +I YDA+E +VE AL I + VDV F S C+ INV EF NFG P+ +Y + L G++T I G T+ D DG Y+S+ GTKE++ CSNRG CD +G CDCF++ SS+GY G RGDCGY TT CPGEV CS +G CD+ + C C + +GDCSL CP G SWFSYPS +D+AHD+ ECS+ G+CD G+C C D F GAACEYMIC GG + PC+G G+C+SMAELA+ A + GD TYG+DPN+G TWDAHR+F C CD Y GYDCS R C GDDP ++ E Q C A GTFT +FRQ+ T ++ N+T A+ LE L +++ V V F S G +C +D++TVA V F T GD+P L D S L
Sbjct: 187 ASGGSFVLYYRGKPSDTIAYDATEDEVEAALTYINRLTE-VDVSFGTGSS-VCNADDINVVTVEFTQNFGEQPPLVAYTDGLDDGAIT---IKTAGGTLTDDDGTTYTSVTGTKENDVCSNRGTCDTSNGSCDCFSTXXXXXXSSNGYADAGNRGDCGYPSTTIGACPGEVECSLNGYCDDGDQEYRCYCADTWFSGDCSLRGCPEGRSWFSYPSEDDKAHDEMVECSNMGICDTAEGVCSCRDGFFGAACEYMICGGGTDTPCNG---------------------------------------------NGQCLSMAELAIKATSNGDAAATTYGSDPNDGGTWDAHRLFHCLCDDGYEGYDCSLRSCPTGDDPATYDDAREQQLFQCAADAGTFTATFRQQTTGAINANATKAEFVSALEELSSINKVEVRFSS--GATVCYGSSDDANTVA-VRFQTPTGDLPDLTFDDSGL 609
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: A0A7S3HDR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDR3_9STRA) HSP 1 Score: 327 bits (837), Expect = 8.450e-103 Identity = 173/409 (42.30%), Postives = 234/409 (57.21%), Query Frame = 1
Query: 4 ATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADSGACSTTS--INVEFLGNFGPVRPMWSY-NALTPGSVTTLAITADGSTVY-DSDGVGYSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTT-----AGCPGEVACSGHGTCDESTFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKET 1203
+TAGSFVLYY G + SI + A+ V AL IP I V V FS + C ++VEF FGP+ P+ ++ S L I+ADG T + D G +SS+KG+KE C+NRG+CD++DG+C C+ +N D++ SS+GY G RGDCG+ V+++ CPG + CSGHG C++STF C C+ G GDCSL+ CP G +WF YP+ ++ AH D+ CS+ G CD TG C+C + F+G AC+YM C G +PC+G GRCM+MAELAL A+ GD T+Y YG+DPN +TWD RV GC+CD Y+GYDCS + C +GDD G++ SE+Q + C A G FTLSFRQ+ T
Sbjct: 183 STAGSFVLYYNGVPSKSIPFTANAAMVRAALEAIPQITE-VKVTFSQSHGTICQIKPNVVSVEFTQQFGPLNPLVPVLDSAFDASGGLLEISADGRTTFADVTGQRFSSVKGSKESTVCANRGLCDLKDGVCGCYDTNGDVYGSSNGYGKAGPRGDCGFVVSSSEEKGVTTCPGLLQCSGHGVCEDSTFQCHCSAGWFGGDCSLMQCPQGQTWFGYPTADESAHLDYATCSNMGTCDTRTGRCECREGFYGEACQYMACGGPQGNPCNGH---------------------------------------------GRCMTMAELALWADKNGDATEYEYGSDPNNFATWDYDRVHGCYCDPGYSGYDCSLKDCPVGDDAGTYHDASEIQILQCVANTGNFTLSFRQQVT 545
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Match: A0A7S2CKM3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CKM3_9STRA) HSP 1 Score: 322 bits (824), Expect = 6.200e-102 Identity = 167/423 (39.48%), Postives = 236/423 (55.79%), Query Frame = 1
Query: 160 CSTTSINV---EFLGNFGPVRPMWSYNALTP-GSVTTLAITADGSTVYDSDGVGYSSIKGTKEDEECSNRGICDIQDGICDCFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEVACSGHGTCDESTFTCQCNNGRTAGDCSLLTCPYGSSWFSYPSMNDRAHDDHTECSDGGLCDRETGMCKCGDLFHGAACEYMICPGGINDPCHGPLRVGKHSLTSKIGIPFEGVVMYFDKTVGLGLSLARDIPVSQPSLTGRCMSMAELALVAENKGDTTDYTYGADPNEGSTWDAHRVFGCHCDYSYTGYDCSDRVCAIGDDPGSWGQESEVQAITCKATNGTFTLSFRQKETYPVHFNSTSADLQRTLEALDTLDVVSVAFDSHRGTAICQNDS-STVASVTFITQHGDIPLLGVDASQLIDD 1413
CST +N+ EF NFG + P+ Y T G + T DG +YDS G + GTKE+ ECS++G+C +D C CF +N + + SSDGY+G GTRGDCG+ ++ A CPG+++CSGHG C + + C C++G GDCSL TCP+G SW++YP+ ++ AH + ECSDGG+CDR G C C + + GAACEYM CP PC+G GRC+SMA+ A+ A YTYG D N TWDAHR+ GC CD Y GYDCS+R C +GDDPG++GQ +E+Q + C A +G FTL++ + T + FN+++A+++ LE L T+ + + F S DS + + V F T+HGD+ + D S + D+
Sbjct: 16 CSTVRVNIVEIEFKQNFGAIDPIALYAEGTDLGDGQIVFATEDG--LYDSAGDRFFETDGTKENYECSDKGLC--EDSYCSCFDTNSEYYVSSDGYDGYGTRGDCGHAISVVANCPGDISCSGHGVCSDE-YACSCSDGWMGGDCSLRTCPFGPSWYAYPTADEVAHFEIAECSDGGVCDRSAGTCTCSESYSGAACEYMPCPSSTTSPCNGH---------------------------------------------GRCISMAKAAIEA-------GYTYGLDTNLVETWDAHRIHGCACDDQYEGYDCSERTCPLGDDPGTYGQFNELQLLKCTAFSGEFTLTYLAETTGAIAFNASAAEVEAALETLHTIVDIDITFTSDDKACSADTDSVANIMKVQFKTEHGDLDAIVADNSAIYDE 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11654.1298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11654.1298.1 >prot_H-elongata_contig11654.1298.1 ID=prot_H-elongata_contig11654.1298.1|Name=mRNA_H-elongata_contig11654.1298.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=475bp KATAGSFVLYYEGYATSSIMYDASEMDVEDALLTIPVIQGGVDVQFSLADback to top mRNA from alignment at H-elongata_contig11654:464..4450+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11654.1298.1 ID=mRNA_H-elongata_contig11654.1298.1|Name=mRNA_H-elongata_contig11654.1298.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3987bp|location=Sequence derived from alignment at H-elongata_contig11654:464..4450+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11654:464..4450+ >mRNA_H-elongata_contig11654.1298.1 ID=mRNA_H-elongata_contig11654.1298.1|Name=mRNA_H-elongata_contig11654.1298.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2850bp|location=Sequence derived from alignment at H-elongata_contig11654:464..4450+ (Himanthalia elongata Himel1 dioecious)back to top |