mRNA_H-elongata_contig116526.1296.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig116526.1296.1
Unique NamemRNA_H-elongata_contig116526.1296.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A6H5KNJ4_9PHAE (G-patch domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ4_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 1.140e-135
Identity = 265/570 (46.49%), Postives = 339/570 (59.47%), Query Frame = 1
Query:    1 QARSDFDTLGSTADEFARRHADREAAGSTIPGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHAGRNVYSTTELVQQTSDRGV--GVISALPPRPHHASDLFRGSQGFILDDAEDDVYERDIGKEAYDGSFDADGEHADGKRDSVALYAKTLASHEVDSKDGEVMLTSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEEDMKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEATVPSETPTAKD-------------SATLSFLSPVSRKKLLETASLVRSSAGSFPAALSAPSPEVSKSISRYTSFVCAIVFGQANTSQRKEALQFSLANRFTSET---SSTVKAGDASLTAVDGLASSAGLTLHTSAQSGTTNAPSPATTPAPGKNASEATRDPVRSSFGWRPAPLLCKRLNVPVP--TASTEVWVSKEGLQNWNSAAGVLKKETRELSGRFIPDSCTRSSQPKV 1650
            QA+  FDTLGSTADE AR+HA+ EAAG  IPGP PSEL++ + DPMGKKLLRTMGW+EGQGVG RVRR     A  + D+SPE+ LP  ARAGLG++ REL++K+GLTFAP N D+K Q ++ KTNL+GVG +PFK APEFGA        R+VYST ++VQ   D G   G+ + +  R   A+ + RGS GF+LDD EDDVYE  +GKEAYD + DADG  A               S   D  + E ML SRRYARCPSDGRLPP GFVV  RPD   K W PPIPPA+F P  +FE+D K P    + T Q     +L A GR RLLGE  A   + TP A               S+ LSFLSP +RKK+LE A+  +        A S  SP+   + S++   + ++   Q N+SQ+ E L F+LA +FTSET   S++ +  D     +D  +  AGLTL   A + T N  S AT        +E   +PVR +  W P PLLCKR NVPVP  ++S+  W +K G       AG  +K    L+ +F+PDS +   QP++
Sbjct:   73 QAKPAFDTLGSTADEVARKHAEMEAAGGAIPGPAPSELIIPVGDPMGKKLLRTMGWREGQGVGKRVRRKXXXPAPAEADDSPEDVLPEQARAGLGEKGRELLDKEGLTFAPRNADVKMQHVLAKTNLHGVGHEPFKDAPEFGAARAGATGVRSVYSTEDIVQHPMDAGAAGGMAAGVSRRSLAAAVVGRGSHGFVLDDGEDDVYESGLGKEAYDQALDADGGRAAAHAGLPGSAKAWALSGAADDDEDEPMLASRRYARCPSDGRLPPTGFVVAQRPDVHQKHWAPPIPPANFRPTIEFEDDAKTP--LELSTSQRYGGAHLDASGRARLLGEPSAQSSTSTPVAPPTVLDKGKAHLPDGSSALSFLSPAARKKVLEAANATK--------APSRSSPDTGGAASKHQRPLGSM--SQDNSSQQSEGLPFTLAAKFTSETPAASNSDEPQDQVAGIIDPTSRPAGLTLRRPASTDTLNKASTATVSVDKSGRTEEELNPVRRTGDWIPTPLLCKRFNVPVPKTSSSSMEWTTKGG-----RPAGAEEKALGPLT-KFVPDS-SAIDQPQI 623          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: D7FJ14_ECTSI (RNA binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ14_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 5.770e-119
Identity = 235/485 (48.45%), Postives = 300/485 (61.86%), Query Frame = 1
Query:    1 QARSDFDTLGSTADEFARRHADREAAGSTIPGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHAGRNVYSTTELVQQTSDRGV--GVISALPPRPHHASDLFRGSQGFILDDAEDDVYERDIGKEAYDGSFDADGEHADGKRDSVALYAKTLA-SHEVDSKDGEVMLTSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEEDMKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEA----TVPSETPTAKD---------SATLSFLSPVSRKKLLETASLVRSSAGSFPAALSAPSPEVSKSISRYTSFVCAIVFGQANTSQRKEALQFSLANRFTSET---SSTVKAGDASLTAVDGLASSAGLTLHTSAQSGTTNAPSPAT 1398
            QA+  FDTLGSTADE AR+HA+ EA G  IPGP PSEL++ + DPMGKKLLRTMGW+EGQGVG+RVRR        + D+SPE++LP  ARAGLG + REL++K+GLTFAP N D+K Q+++ KTNL+GVG +PFK APEFGA        R+VYST ++VQ   D G   G+++ +  R   A+ + RGS GF+LDD EDDVYE  + KEAYD + DADG  A      ++  AK  A S   D  + E +L SRRYARCPSDGRLPP GFVV  RPD   K W PPIPPA+F P  +FE+D K P    + T Q     +L A GR RLLGE  A    + P   PT  D         S+ LSFLSP +RKK+LE A+  +        A S  SP+   + S++   + ++   Q N+SQ+ E L F+LA +FTSET   S++ +  D     VD  +  AGLTL   A + T N  S AT
Sbjct:   93 QAKPAFDTLGSTADEVARKHAEMEATGGAIPGPAPSELIIPVGDPMGKKLLRTMGWREGQGVGNRVRRKXXXXXXAEADDSPEDELPEQARAGLGGKGRELLDKEGLTFAPTNADVKMQSVLAKTNLHGVGHEPFKDAPEFGAARAGATGVRSVYSTEDIVQHPMDAGAAGGIVAGVSRRSLAAAVVDRGSHGFVLDDDEDDVYESGLDKEAYDQALDADGGRA-AAHAGLSGSAKAWALSGAADDDEDEPLLASRRYARCPSDGRLPPTGFVVAQRPDVQQKHWAPPIPPANFRPTVEFEDDAKTP--LELSTSQRYGGAHLDASGRARLLGEPSAQSLTSTPVAPPTVLDKGKAYLPDGSSALSFLSPAARKKVLEAANATK--------APSRFSPDTGAAASKHQRTLGSM--SQDNSSQQSEGLPFTLATKFTSETQAASNSDEPQDQVAGIVDPTSRPAGLTLRRPASTDTLNKASTAT 564          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A835ZFT9_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT9_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.520e-31
Identity = 182/674 (27.00%), Postives = 247/674 (36.65%), Query Frame = 1
Query:    4 ARSDFDTLGSTADEFARRHADREAAGSTIPGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRA----------------------RRRTASVQGDESPEEDLPRVA-----------------------------RAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAI---------GEAFHAGRN--VYSTTELVQQTSDRGVGVISALP---PRPHH--------------------------ASDLFRGSQGFILDDAEDDVYERDIGKEAYDGSFDADGEHADGKRDSVALYAKTLASHEVDSKDGEVMLTSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEEDMKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEATVPSETP------TAKDSATLS------------------FLSPVSRKKLLETASLVRSSAGSF-----PAALSAPSPEVSKSISRYTSFVCAIVFGQANTSQRKEALQFSLANRFTSETSSTVKAGDASLTAVDGLASSAGLTLHTSAQSGTTNAPSP---ATTPAPGKNASEATRDPVRSSFGWRPAPLLCKRLNVPVPTASTEVWVSKEGLQNWNSAAGVLKKETRELS----GRFIPDSCTRSSQP 1644
            A+ DFDT+G TA   AR+HA+  + GS IPGP P EL+   SDP+G++LLR MGW+EGQGVG RVRR                       R R   +Q  E   +  P+ +                              A    RAR       +TFAP N          K + YGVG+DP+  APE  A           +A  AG    VY  ++ V+             P   P   H                          ++   RG  GF +DD +DD    D   E YD +   D     G   +    A    +  V+   GE     RR+ARCPSD R PP GFVV S P      W PP PP+ F P  QF  +        +     +    + A  RG LLGE                T +  AT +                  F+           AS    S+G+      P  LS  +P+   +                    +  A Q   A       S   + G+  +   +  A  AGL+       G  +A +P   A   A  +    A  +P R+   WRP+PLLCKRLNVPVP AS EV         W + AG  ++++ E+     G+F P +   +  P
Sbjct:   95 AKEDFDTMGQTAAAAARQHAEAISKGSAIPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGRRVRRRPXXXXXXXXAPRTGETEGAAPKRPRLGPLQHLEDECQQQPQASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAAVRAR--FAGGPVTFAPDNAAAAVAVPPAKADAYGVGYDPYAHAPELAAALRAGSRRGAADAAAAGARPAVYRMSDAVRGXXXXXXXXXXRAPRGVPHERHXXXXXXXXXXXXXXXSSRAQQRSGGGSAQQQRGLHGFAVDDEDDDAAFGDAAIE-YDTTIVEDEVEVGGSGGAALSSAVAAWTKGVEVDAGEAAAALRRHARCPSDNRPPPVGFVVASIPLQKPTYWTPPEPPSTFVPRHQFSPEQDRARLEMVDMIWGKARGRVDAGQRGALLGEAPRVRXXXXXXXXLVVTLQQGATAAAXXXXXXXXXXXXXAREVFMPAAFDGLKSAMASRFTGSSGTEAPPTGPIGLSMRAPKGLANXXXXXXXXXXXXXXXXXXXAQATAAQ---AQALPKARSKLFRGGEPEVLMPE--ARPAGLST------GGLSAATPKVDAEAEAAKERERLAALEPTRTVSVWRPSPLLCKRLNVPVPPASREV--------QWGTQAGRAQEKSTEIFHESIGKFAPSAAAAAKLP 746          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A7S2R5Z0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5Z0_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.190e-27
Identity = 119/343 (34.69%), Postives = 157/343 (45.77%), Query Frame = 1
Query:   13 DFDTLGSTADEFARRHADREAAGST--IPGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAP-EFGAIGEAFHAGRNVYSTTELVQQTSDRGVGVISALPPRPHHASDLFRGSQGFILDDAEDDVYERDIGKEAYDGSFDADGEHADGKRDSVALYAKT--LASHEVDSKD----GEVMLTSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEEDMKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEATVPS 1014
            ++DTLG+ A + A+  A REA  ST  IPGP P EL+V     +GK LLR+MGW+EGQG+G RVRR     A         E LP  A + L         +  +TFAP NT    +    K +LYGVGFDP   AP EF     A  A     S ++ V +      G  SA+      AS       GF  +D +DDVY RD        ++D +   A G +D  A  AK+  L   +V + D    G+      +  RC  DGR   PGF + +RP    + W  P PP +F P+  FEE +   D              L    R +LLGE    VP+
Sbjct:   97 EYDTLGAGAKQRAQASAAREAKESTSAIPGPAPMELMVVTDHSIGKALLRSMGWREGQGIGPRVRRKTSADA---------ESLPEAASSAL---------QGEVTFAPENTASHLRVPQGKDDLYGVGFDPLDHAPSEFATFRAAAAAAA---SGSDAVYKMD----GSASAVQVSRRMAS-------GFAANDEDDDVYGRDSM-----ANYDLELAEAVGAQDDPAGSAKSGGLLVPDVSTMDAFRTGDAPARQEKQ-RC-GDGRAVLPGFRLAARPVDAKQHWEAPRPPRNFRPVHVFEEPIAVVDGP------------LTIASRQKLLGEDGRVVPA 388          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A7S0IK53_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IK53_MICPS)

HSP 1 Score: 91.7 bits (226), Expect = 1.560e-16
Identity = 78/213 (36.62%), Postives = 104/213 (48.83%), Query Frame = 1
Query:    1 QARSDFDTLGSTADEFARRH-ADREAAG----------STIPGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHAGRNVYSTTELVQQTSDRGVGVISALPPRPHHASDLFRGSQGFILDDAEDDVY 606
            +AR D+DT G+ A+  A+R  A  EA G          + IPGP PS+LVV  SDP+G +LLR MGW+ G+G+G    R   R     GD +  +D   V     G+R+R     +  T   H+T      L  KTNL+GVG+DPF+GA EF  + EA    RN             RG+G +     RP        G   F  DD ++DVY
Sbjct:  140 EARDDYDTFGTAAELRAQRAMAASEATGDGGRRKVHGPAIIPGPVPSDLVVPTSDPVGARLLRLMGWRRGKGIG----RGGARNGDGDGDVNDGDD---VNDENGGRRSR---WGESATALVHDTP--RHVLHPKTNLHGVGYDPFEGAEEFRKVAEARAVRRNA----------DPRGLGSV-----RPTRGEAF--GVGVFEGDDPDEDVY 323          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A433PUA8_9FUNG (G-patch domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PUA8_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 2.290e-16
Identity = 106/365 (29.04%), Postives = 158/365 (43.29%), Query Frame = 1
Query:   13 DFDTLGSTADEFARRH----ADREAAGSTIPGPTP---SELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHA-----GRNVYSTTELVQQTSDR----------GVGVISALPPRPHHASDLFRG---SQGF---ILDDAEDDVYERDIGKEAYDGSFDADGEHADGKRDSVALYAKTLASHEVDSK-DGEVMLTSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEEDMKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEATVPSET 1020
            +FD  G T  E AR+     A  +   S++   TP   S LV    DP+G +LLR MGW+ GQG+G+RV   +R+   V    +  EDL  V  A            D L FAP ++ + + T   KT++YG+G+DP++ APE   +     A     G +    +E V+               GVGV+           D++ G   S+G    +L D ED+      G   + G      E A  +R   +   +    H  D K  G+V           SDG  P  GFV+V +P  + K +PPP+ P+ F P+  F     +P  + +   ++ F     A  RG LLGET    P+ +
Sbjct:   20 EFDIFGGTERELARKRQMLEATNQGGDSSLNLITPTLVSSLVTPSKDPVGIRLLRAMGWRSGQGIGARVLGRKRKPTDV----NDAEDLDDVYAA------------DKL-FAPKDSAIISFTN--KTDVYGIGYDPYRDAPEVAEMKRLKEAXXXDEGEDEMDYSEGVESKKXXXXXXXXXGGFGVGVLEDDLDDLQDDDDIYSGGSSSKGLYHTMLFDEEDED-----GAITFGGRSKKWDERASKRRKMASERDRDQEKHGRDKKGSGKVC----------SDGMPPLKGFVLVKKPIQVEKWYPPPVVPSSFIPVHIFPHPA-HPSDNNLAVNKDTF--ASAADHRGHLLGETPLPGPNRS 347          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A507D3T3_9FUNG (G-patch domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D3T3_9FUNG)

HSP 1 Score: 93.6 bits (231), Expect = 3.120e-16
Identity = 102/352 (28.98%), Postives = 147/352 (41.76%), Query Frame = 1
Query:   16 FDTLGSTADEFARRHA-----DREAAGSTIPGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHAGRNVYSTTELVQQTSDRGVGVISALPPRPHHASDLFRGSQGFILDDAEDDVYERDIGKEAYDGSFDADGEHADGKRDSVALYAKTLASHEVDSKDGEVMLT-SRRYARCPS-----------DGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEEDMKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEATVPSET 1020
            FD LG T  +  RR A       E+A   +P     +L+   SDP+G KLLR MGW+EGQGVG+R+ R             P +    V  A +             +FAP +T L       KTN++G+G++P + A EF              + T  V+  SD  +     LP +   A     G+  F  +D ++D+   D  K AY    D D E  D     VA   K L + E + +      + +R     P            DG+ P  GFV+ + P  ++K +  P  PADF PI  F+     PD   ++T + R    L A  R  +LGE     PS +
Sbjct:  150 FDILGGTERDVERRRAAAASQQNESAVGPLPTKVIGDLIGPSSDPIGMKLLRQMGWREGQGVGARLFR------------KPTDTSDDVYAANI-------------SFAPKDTSLVP--FDQKTNVFGLGYNPHENAKEF--------------ALTSDVKDASDDSL----ELPDKGSFAIKGGFGTGLFDDNDLDEDIDVYDSRKTAYTLVMDDDEEDFD-----VATIKKRLQALENEKRTKSTKKSVTRNSISVPEPLRQVTIQLCHDGKPPLRGFVLANNPPPLSKWFQSPQMPADFIPIHDFDAPGPRPD---LKTEKPRPQSELTADQRRDILGEKPLDGPSRS 448          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A397TQL7_9GLOM (G-patch domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TQL7_9GLOM)

HSP 1 Score: 93.2 bits (230), Expect = 4.100e-16
Identity = 106/357 (29.69%), Postives = 150/357 (42.02%), Query Frame = 1
Query:    4 ARSDFDTLGSTADEFARRH---ADREAAGSTI---PGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKD-GLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHAGRNVYSTTELVQQT-SDRGVGVISALPPRPHHASDLFRGSQGFILDDAEDDVYERDIGKEAYDGSFDADGEHAD---GKRDSVALYAKTLASHEVDSKDGEVMLTSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQF-------EEDMKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEATVPSET 1020
            A  +FD+ GST  E  ++    +  E +GS +   P     +LV+   DP+G +LL+ MGW+EGQG+G RV + R             ED              EL E D  + FAP +T++       K+N YG+ FDPFK A EF  I ++ +   + Y      Q + S RG G I                  GF + D +DD+   +  K  +  S            GK+ S  L  KT    E  S +G V            DG L   GFV+ SRP  ++K + PPI P  F  I +F       + D + P     Q +Q      + A  RG LLGET    P+ +
Sbjct:  117 ATDEFDSFGSTERELEKKRMLASSMEESGSVLGALPDKFIDDLVLPNKDPVGVRLLKAMGWREGQGIGPRVSKFRN------------EDT-------------ELFESDKSVLFAPKDTEMIK--FDQKSNSYGLDFDPFKNATEF--IPQSSNIKGDSYLQHNKFQDSLSRRGEGTI------------------GFGMSDDDDDILYSETSKANFHSSXXXXXXXXXXXGGKKLSKYLPPKTF--QEKKSSNGRVY----------HDGSLSLRGFVLASRPVPLDKWFAPPILPKGFVSIHEFNFSGEKEKIDTQVPFQRGKQQKQTTL--AILAEQRGELLGETPLNAPARS 412          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A507EV29_9FUNG (G-patch domain-containing protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EV29_9FUNG)

HSP 1 Score: 92.8 bits (229), Expect = 5.610e-16
Identity = 99/359 (27.58%), Postives = 148/359 (41.23%), Query Frame = 1
Query:    4 ARSDFDTLGSTADEFARRHA-------DREAAGSTIPGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHAGRNVYSTTELVQQTSDRGVGVISALPPRPHHASDLFRGSQGF---ILDDAEDDVYERDIGKEAYDGSFDADGEHADGKRDSVALYAKTLASHEVDSKDGEVMLTSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEED-----MKNPDHSAIQ-----TRQERFPQYLKAPGRGRLLGETEATVPSET 1020
            A  ++D LG T  E AR+ A       ++   G  +PG    +L+    DP+G KLLR MGW+EG GVG R +R R+         + E+D+     A                FAP   D+    L  KT+ +G+GFDPF  APEF        AGR      + + +  ++          +P  A     G  GF   + +D E+D+     G   YD   D D +           +A   ++    S     +        C +DGRLP  GF++ +        +PPPI P DF P   F+ +     ++ P H A+      +RQ R  + L A  R  +LGE   + P  +
Sbjct:  127 ATEEYDILGGTERELARKRAAVNTMEKEQNVLGQ-LPGRLVEDLIGPPKDPIGIKLLRQMGWREGHGVGPRAKRRRK---------TEEDDIYAAEHA----------------FAPK--DIAVDILKPKTDTFGLGFDPFHNAPEF--------AGRKTVPGAQALSEAPEK---------KKPKSA-----GRAGFGVGVFEDEEEDLDVYGSGMANYDMIIDDDDDEVHRLGQKFGRFASKRSTALATSPSEPTV----EGGLC-NDGRLPIVGFLLANNTLPELTWYPPPILPTDFTPRHTFQPNTPLASLRQPQHPAVDQFTHASRQGRQTE-LTADQRRDILGEEALSGPQRS 429          
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Match: A0A0L0HSZ5_SPIPD (G-patch domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HSZ5_SPIPD)

HSP 1 Score: 92.0 bits (227), Expect = 9.820e-16
Identity = 98/344 (28.49%), Postives = 137/344 (39.83%), Query Frame = 1
Query:    4 ARSDFDTLGSTADEFARRHA-------DREAAGSTIPGPTPSELVVSMSDPMGKKLLRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARELIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHAGRNVYSTTELVQQTSDRGVGVISALPPRPHHASDLFRGSQGF---ILDDAEDDVYERDIGKEAYDGSFDADGEHADGKRDSVALYAKTLASHEVDSKDGEVMLTSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEEDMKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEAT 1005
            A  ++D +G T  E AR+ A       ++   G  +PG    +L+    DP+G KLLR MGW+EG GVG R +R R+         + E+D+     A                FAP   D+    L  KT+ +G+GFDPF  APEF        AGR                V    AL   P        G  GF   + +D E+D+     G   YD   D D +        +   A   +     S    ++      A   SDGRLP  GF++ +        +PPPI P DF P   F+ +   P  S  Q +     Q+  A  +GR   +TE T
Sbjct:  127 ATEEYDIIGGTERELARKRAAVSTMEKEQNVLGQ-LPGRLVEDLIGPPKDPIGIKLLRQMGWREGHGVGPRAKRKRK---------TEEDDIYAAEHA----------------FAPK--DIAVDILKPKTDTFGLGFDPFHNAPEF--------AGRKT--------------VPGAQALSEGPEKKKPKSAGRAGFGVGVFEDEEEDLDVYGSGMTNYDMIIDDDDDEMHRLGQKLGRSASKRSMALATSPSAPIV-----QAGLCSDGRLPIVGFLLANNTLPEPTWYPPPILPTDFIPRHTFQPN--TPSASLRQPQHPTVDQFTHASRQGR---QTELT 410          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116526.1296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNJ4_9PHAE1.140e-13546.49G-patch domain-containing protein n=1 Tax=Ectocarp... [more]
D7FJ14_ECTSI5.770e-11948.45RNA binding protein, putative n=1 Tax=Ectocarpus s... [more]
A0A835ZFT9_9STRA1.520e-3127.00G-patch domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2R5Z0_9STRA1.190e-2734.69Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0IK53_MICPS1.560e-1636.62Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A433PUA8_9FUNG2.290e-1629.04G-patch domain-containing protein n=1 Tax=Endogone... [more]
A0A507D3T3_9FUNG3.120e-1628.98G-patch domain-containing protein n=1 Tax=Synchytr... [more]
A0A397TQL7_9GLOM4.100e-1629.69G-patch domain-containing protein n=1 Tax=Glomus c... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116526contigH-elongata_contig116526:135..1962 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score384.4
Seed ortholog evalue8.8e-104
Seed eggNOG ortholog2880.D7FJ14
Preferred nameGPATCH1
KEGG koko:K13123,ko:K19842
KEGG Pathwayko04011,map04011
KEGG ModuleM00355
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0071013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.mRNA processing
EggNOG OGsKOG2138@1,KOG2138@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA binding protein, homologue of TOUGH
Ec32 orthologEc-07_004810.1
Exons2
Model size1650
Cds size1650
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929676.8893943-CDS-H-elongata_contig116526:134..12911622929676.8893943-CDS-H-elongata_contig116526:134..1291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig116526 135..1291 +
1691679115.764842-CDS-H-elongata_contig116526:134..12911691679115.764842-CDS-H-elongata_contig116526:134..1291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig116526 135..1291 +
1622929676.9096131-CDS-H-elongata_contig116526:1469..19621622929676.9096131-CDS-H-elongata_contig116526:1469..1962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig116526 1470..1962 +
1691679115.7756777-CDS-H-elongata_contig116526:1469..19621691679115.7756777-CDS-H-elongata_contig116526:1469..1962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig116526 1470..1962 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116526.1296.1prot_H-elongata_contig116526.1296.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig116526 135..1962 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig116526.1296.1

>prot_H-elongata_contig116526.1296.1 ID=prot_H-elongata_contig116526.1296.1|Name=mRNA_H-elongata_contig116526.1296.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=550bp
QARSDFDTLGSTADEFARRHADREAAGSTIPGPTPSELVVSMSDPMGKKL
LRTMGWKEGQGVGSRVRRARRRTASVQGDESPEEDLPRVARAGLGKRARE
LIEKDGLTFAPHNTDLKAQTLIVKTNLYGVGFDPFKGAPEFGAIGEAFHA
GRNVYSTTELVQQTSDRGVGVISALPPRPHHASDLFRGSQGFILDDAEDD
VYERDIGKEAYDGSFDADGEHADGKRDSVALYAKTLASHEVDSKDGEVML
TSRRYARCPSDGRLPPPGFVVVSRPDGMNKCWPPPIPPADFDPIFQFEED
MKNPDHSAIQTRQERFPQYLKAPGRGRLLGETEATVPSETPTAKDSATLS
FLSPVSRKKLLETASLVRSSAGSFPAALSAPSPEVSKSISRYTSFVCAIV
FGQANTSQRKEALQFSLANRFTSETSSTVKAGDASLTAVDGLASSAGLTL
HTSAQSGTTNAPSPATTPAPGKNASEATRDPVRSSFGWRPAPLLCKRLNV
PVPTASTEVWVSKEGLQNWNSAAGVLKKETRELSGRFIPDSCTRSSQPKV
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mRNA from alignment at H-elongata_contig116526:135..1962+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig116526.1296.1 ID=mRNA_H-elongata_contig116526.1296.1|Name=mRNA_H-elongata_contig116526.1296.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1828bp|location=Sequence derived from alignment at H-elongata_contig116526:135..1962+ (Himanthalia elongata Himel1 dioecious)
CAGGCTAGATCCGACTTCGATACTCTAGGCTCCACGGCTGATGAGTTTGC TCGGCGGCACGCCGACAGAGAGGCAGCAGGAAGTACCATCCCCGGACCGA CACCATCCGAGCTGGTTGTGTCCATGAGCGATCCCATGGGCAAGAAGCTT CTCAGGACCATGGGTTGGAAGGAGGGTCAAGGAGTTGGGAGTCGGGTAAG GAGGGCACGACGGCGAACTGCATCAGTGCAAGGCGATGAGTCCCCCGAGG AAGACCTGCCTCGAGTCGCACGCGCAGGGCTGGGCAAGAGAGCGCGAGAG CTCATCGAGAAGGATGGCCTAACATTCGCGCCCCACAATACCGACTTGAA GGCACAAACACTTATTGTCAAGACCAACCTCTACGGTGTCGGGTTCGATC CTTTTAAAGGCGCGCCAGAGTTTGGTGCCATCGGAGAAGCATTCCACGCC GGACGTAACGTATATAGCACCACGGAGCTTGTTCAGCAGACGAGCGATAG AGGAGTCGGGGTGATCTCAGCACTCCCACCACGACCGCATCATGCATCCG ACCTTTTTAGAGGGAGTCAAGGATTTATACTTGATGACGCCGAAGACGAT GTATATGAAAGAGATATCGGCAAGGAAGCGTACGATGGCTCTTTTGATGC AGACGGAGAACACGCAGACGGCAAGCGAGATAGTGTAGCCCTCTACGCCA AAACTTTGGCCTCACACGAAGTGGATTCCAAAGATGGCGAGGTAATGCTC ACCTCCCGAAGGTACGCACGATGCCCTTCAGATGGTCGTCTGCCTCCACC CGGCTTTGTTGTCGTAAGCAGGCCTGACGGAATGAACAAGTGTTGGCCGC CACCCATCCCTCCAGCAGATTTTGACCCAATCTTTCAGTTTGAGGAGGAT ATGAAGAATCCTGACCATTCAGCCATTCAAACACGCCAGGAACGATTTCC TCAATATCTGAAAGCGCCAGGACGTGGCAGACTCTTGGGAGAGACGGAGG CCACGGTTCCATCCGAAACGCCTACCGCGAAAGATTCAGCAACATTATCC TTCTTGTCTCCAGTTTCTCGCAAAAAGTTGCTTGAGACAGCAAGCTTGGT ACGCTCATCAGCAGGCAGCTTCCCCGCAGCCCTTTCTGCTCCCTCTCCTG AGGTGAGGTGATACAGGATAATGAAATTACTGATGTACTCTCCAGCGGGT CGTGTTTATTGGCAAGAGCTTTACTGGCGTTTTGATCGTTATTTCAAGGT TACCTTTTCAACTCTGAAGTGTAGTTGCCGTAATAACTTAAGCTCAGTTC CGAGTGTTTATCGTTTGACTTGAGACATAACTAAGCAAATCGATCTCACG ATATACTTCGTTCGTTTGCGCCATCGTCTTCGGGCAGGCAAATACAAGTC AACGCAAAGAAGCCCTCCAGTTTTCTCTAGCGAATAGGTTCACATCGGAG ACGTCATCCACCGTGAAAGCTGGAGACGCTTCGTTGACCGCTGTCGATGG ACTCGCCAGCTCAGCAGGTCTTACTTTGCACACTTCGGCACAGTCTGGGA CTACAAATGCACCCTCTCCCGCAACGACTCCTGCACCGGGAAAAAACGCA TCCGAAGCCACTCGCGATCCTGTGCGATCTTCTTTTGGTTGGAGACCTGC ACCGCTCTTGTGTAAACGACTGAACGTACCGGTGCCTACTGCTTCCACAG AGGTTTGGGTGTCGAAGGAAGGACTTCAAAATTGGAACAGTGCAGCTGGC GTATTGAAAAAAGAGACACGCGAACTTTCGGGGCGGTTTATTCCAGATTC ATGTACAAGATCAAGTCAACCCAAGGTA
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Coding sequence (CDS) from alignment at H-elongata_contig116526:135..1962+

>mRNA_H-elongata_contig116526.1296.1 ID=mRNA_H-elongata_contig116526.1296.1|Name=mRNA_H-elongata_contig116526.1296.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3300bp|location=Sequence derived from alignment at H-elongata_contig116526:135..1962+ (Himanthalia elongata Himel1 dioecious)
CAGGCTAGATCCGACTTCGATACTCTAGGCTCCACGGCTGATGAGTTTGC
TCGGCGGCACGCCGACAGAGAGGCAGCAGGAAGTACCATCCCCGGACCGA
CACCATCCGAGCTGGTTGTGTCCATGAGCGATCCCATGGGCAAGAAGCTT
CTCAGGACCATGGGTTGGAAGGAGGGTCAAGGAGTTGGGAGTCGGGTAAG
GAGGGCACGACGGCGAACTGCATCAGTGCAAGGCGATGAGTCCCCCGAGG
AAGACCTGCCTCGAGTCGCACGCGCAGGGCTGGGCAAGAGAGCGCGAGAG
CTCATCGAGAAGGATGGCCTAACATTCGCGCCCCACAATACCGACTTGAA
GGCACAAACACTTATTGTCAAGACCAACCTCTACGGTGTCGGGTTCGATC
CTTTTAAAGGCGCGCCAGAGTTTGGTGCCATCGGAGAAGCATTCCACGCC
GGACGTAACGTATATAGCACCACGGAGCTTGTTCAGCAGACGAGCGATAG
AGGAGTCGGGGTGATCTCAGCACTCCCACCACGACCGCATCATGCATCCG
ACCTTTTTAGAGGGAGTCAAGGATTTATACTTGATGACGCCGAAGACGAT
GTATATGAAAGAGATATCGGCAAGGAAGCGTACGATGGCTCTTTTGATGC
AGACGGAGAACACGCAGACGGCAAGCGAGATAGTGTAGCCCTCTACGCCA
AAACTTTGGCCTCACACGAAGTGGATTCCAAAGATGGCGAGGTAATGCTC
ACCTCCCGAAGGTACGCACGATGCCCTTCAGATGGTCGTCTGCCTCCACC
CGGCTTTGTTGTCGTAAGCAGGCCTGACGGAATGAACAAGTGTTGGCCGC
CACCCATCCCTCCAGCAGATTTTGACCCAATCTTTCAGTTTGAGGAGGAT
ATGAAGAATCCTGACCATTCAGCCATTCAAACACGCCAGGAACGATTTCC
TCAATATCTGAAAGCGCCAGGACGTGGCAGACTCTTGGGAGAGACGGAGG
CCACGGTTCCATCCGAAACGCCTACCGCGAAAGATTCAGCAACATTATCC
TTCTTGTCTCCAGTTTCTCGCAAAAAGTTGCTTGAGACAGCAAGCTTGGT
ACGCTCATCAGCAGGCAGCTTCCCCGCAGCCCTTTCTGCTCCCTCTCCTG
AGGTGAGCAGGCTAGATCCGACTTCGATACTCTAGGCTCCACGGCTGATG
AGTTTGCTCGGCGGCACGCCGACAGAGAGGCAGCAGGAAGTACCATCCCC
GGACCGACACCATCCGAGCTGGTTGTGTCCATGAGCGATCCCATGGGCAA
GAAGCTTCTCAGGACCATGGGTTGGAAGGAGGGTCAAGGAGTTGGGAGTC
GGGTAAGGAGGGCACGACGGCGAACTGCATCAGTGCAAGGCGATGAGTCC
CCCGAGGAAGACCTGCCTCGAGTCGCACGCGCAGGGCTGGGCAAGAGAGC
GCGAGAGCTCATCGAGAAGGATGGCCTAACATTCGCGCCCCACAATACCG
ACTTGAAGGCACAAACACTTATTGTCAAGACCAACCTCTACGGTGTCGGG
TTCGATCCTTTTAAAGGCGCGCCAGAGTTTGGTGCCATCGGAGAAGCATT
CCACGCCGGACGTAACGTATATAGCACCACGGAGCTTGTTCAGCAGACGA
GCGATAGAGGAGTCGGGGTGATCTCAGCACTCCCACCACGACCGCATCAT
GCATCCGACCTTTTTAGAGGGAGTCAAGGATTTATACTTGATGACGCCGA
AGACGATGTATATGAAAGAGATATCGGCAAGGAAGCGTACGATGGCTCTT
TTGATGCAGACGGAGAACACGCAGACGGCAAGCGAGATAGTGTAGCCCTC
TACGCCAAAACTTTGGCCTCACACGAAGTGGATTCCAAAGATGGCGAGGT
AATGCTCACCTCCCGAAGGTACGCACGATGCCCTTCAGATGGTCGTCTGC
CTCCACCCGGCTTTGTTGTCGTAAGCAGGCCTGACGGAATGAACAAGTGT
TGGCCGCCACCCATCCCTCCAGCAGATTTTGACCCAATCTTTCAGTTTGA
GGAGGATATGAAGAATCCTGACCATTCAGCCATTCAAACACGCCAGGAAC
GATTTCCTCAATATCTGAAAGCGCCAGGACGTGGCAGACTCTTGGGAGAG
ACGGAGGCCACGGTTCCATCCGAAACGCCTACCGCGAAAGATTCAGCAAC
ATTATCCTTCTTGTCTCCAGTTTCTCGCAAAAAGTTGCTTGAGACAGCAA
GCTTGGTACGCTCATCAGCAGGCAGCTTCCCCGCAGCCCTTTCTGCTCCC
TCTCCTGAGGTGAGCAAATCGATCTCACGATATACTTCGTTCGTTTGCGC
CATCGTCTTCGGGCAGGCAAATACAAGTCAACGCAAAGAAGCCCTCCAGT
TTTCTCTAGCGAATAGGTTCACATCGGAGACGTCATCCACCGTGAAAGCT
GGAGACGCTTCGTTGACCGCTGTCGATGGACTCGCCAGCTCAGCAGGTCT
TACTTTGCACACTTCGGCACAGTCTGGGACTACAAATGCACCCTCTCCCG
CAACGACTCCTGCACCGGGAAAAAACGCATCCGAAGCCACTCGCGATCCT
GTGCGATCTTCTTTTGGTTGGAGACCTGCACCGCTCTTGTGTAAACGACT
GAACGTACCGGTGCCTACTGCTTCCACAGAGGTTTGGGTGTCGAAGGAAG
GACTTCAAAATTGGAACAGTGCAGCTGGCGTATTGAAAAAAGAGACACGC
GAACTTTCGGGGCGGTTTATTCCAGATTCATGTACAAGATCAAGTCAACC
CAAGGTACAAATCGATCTCACGATATACTTCGTTCGTTTGCGCCATCGTC
TTCGGGCAGGCAAATACAAGTCAACGCAAAGAAGCCCTCCAGTTTTCTCT
AGCGAATAGGTTCACATCGGAGACGTCATCCACCGTGAAAGCTGGAGACG
CTTCGTTGACCGCTGTCGATGGACTCGCCAGCTCAGCAGGTCTTACTTTG
CACACTTCGGCACAGTCTGGGACTACAAATGCACCCTCTCCCGCAACGAC
TCCTGCACCGGGAAAAAACGCATCCGAAGCCACTCGCGATCCTGTGCGAT
CTTCTTTTGGTTGGAGACCTGCACCGCTCTTGTGTAAACGACTGAACGTA
CCGGTGCCTACTGCTTCCACAGAGGTTTGGGTGTCGAAGGAAGGACTTCA
AAATTGGAACAGTGCAGCTGGCGTATTGAAAAAAGAGACACGCGAACTTT
CGGGGCGGTTTATTCCAGATTCATGTACAAGATCAAGTCAACCCAAGGTA
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