mRNA_H-elongata_contig11644.1293.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: D8LPQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ3_ECTSI) HSP 1 Score: 229 bits (584), Expect = 2.370e-69 Identity = 105/163 (64.42%), Postives = 131/163 (80.37%), Query Frame = 1
Query: 4 VTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDEDGDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQEGCEY 492
VT LD++RY+G WYQ+Y+S T LLE+ GACVTADY + DG++SVVNTAR S DG+L+ M G+AY KD SKPG+LTVHLDG+PVD PYWVLA+GDE G G YPW+IVSDP RAFLF+LVRD +Q++ D++AKC+ELGFT+ WN+P+KT QEGC Y
Sbjct: 261 VTELDINRYSGRWYQSYASFTAGTLLERQGACVTADYGVKADGSLSVVNTARTNSPDGELVEMTGHAYTKDASKPGQLTVHLDGLPVDGPYWVLAVGDEQGTGSYPWAIVSDPFRAFLFVLVRDT-----AQEDTDLVAKCRELGFTAPWNSPRKTVQEGCTY 418
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: A7SH62_NEMVE (Predicted protein (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SH62_NEMVE) HSP 1 Score: 153 bits (386), Expect = 1.860e-44 Identity = 78/165 (47.27%), Postives = 100/165 (60.61%), Query Frame = 1
Query: 1 TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDEDGDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQ-EGCEY 492
TV L++ Y G WYQ Y+ L V + E+N C TADY ++DG + V N+ R + DG++ + GYAY KD PGK +H D VPVD YWV+ LG DG Y +SIV+D LF+L RDP + DE V+A CKE GFT FWN P+KT Q E C+Y
Sbjct: 2 TVPALNITSYAGRWYQMYADLIVDETYERNSVCTTADYTLRKDGKIGVHNSGRVKTPDGEVKAISGYAYRKDPKVPGKFVLHFDSVPVDGSYWVVKLGPVS-DGQYQYSIVTDSTTLQLFILSRDPSTYSKYNDE--VMAFCKENGFTHFWNKPRKTYQSEDCKY 163
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: A7SH61_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SH61_NEMVE) HSP 1 Score: 151 bits (382), Expect = 2.210e-43 Identity = 79/169 (46.75%), Postives = 102/169 (60.36%), Query Frame = 1
Query: 1 TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDEDGDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQ-EGCEYPSNP 504
TV TL+V Y G WYQ YS V + E+N CVTADY ++DG + VVN+ R DG+L + GYAY D PGKL VH D VPV+ YW+L LG G G Y +SIV+D L+A LF+L RDP+ + + + ++ K GFT WN P+KT Q E C+Y P
Sbjct: 21 TVPTLNVTSYLGRWYQMYSDFIVEETFERNAVCVTADYTLRKDGKIGVVNSNRDKKPDGELKQITGYAYQPDPEVPGKLKVHFDTVPVEGSYWILKLGPVSG-GQYQYSIVTDGLKATLFVLSRDPNNY--EKYDKEIQEFLKNNGFTHLWNKPRKTYQSEDCKYAPKP 186
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: UPI000F551639 (temperature-induced lipocalin-1-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F551639) HSP 1 Score: 141 bits (356), Expect = 2.040e-39 Identity = 75/160 (46.88%), Postives = 100/160 (62.50%), Query Frame = 1
Query: 1 TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDED-GDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQ 477
TV +L+V +Y G WYQ Y+ +V E++ CVTADY ++DG V V+N+ R + G+ + GYAY D ++PGKL VHL GVPVDAPYWV+ LG G+G Y +S+V+D L+ LF+L RD D F DE +V E GFT F+N P T Q
Sbjct: 20 TVPSLNVTKYLGRWYQMYADPSVMATFERDAVCVTADYTLEKDGKVGVLNSERLRTPTGEGKNITGYAYIPDPNQPGKLKVHLGGVPVDAPYWVVKLGPPTFGEGLYQYSVVTDNLQITLFVLARDVDTFKSQYDE-EVRNWLTENGFTRFYNKPVATLQ 178
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: A0A7S2XX84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX84_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.030e-37 Identity = 80/167 (47.90%), Postives = 101/167 (60.48%), Query Frame = 1
Query: 1 TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPV--DAPYWVLALGD-EDGDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQEGCEY 492
TV L++D+Y G WYQ Y+S +V +E CV ADY DGTVSV+N + + G ++ GYAY +S+PG+L VH VP D YWVLALG ++ G Y WSIVSDP RAFLF+L RD +F A VL K LGFTSF N P ++ Q+GC Y
Sbjct: 135 TVAELNLDQYLGRWYQPYASRSVQYTIELGAVCVGADYGLNPDGTVSVLNFNKMLTPGGKDGSISGYAYTPVESEPGQLKVHFPSVPSPQDGDYWVLALGQPQEAGGLYEWSIVSDPNRAFLFILARDVAKFKDKY-AAQVLDLVKSLGFTSFLNEPVESLQDGCVY 300
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: A0A8B7YCF9_ACAPL (uncharacterized protein LOC110978570 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YCF9_ACAPL) HSP 1 Score: 135 bits (340), Expect = 6.260e-35 Identity = 75/171 (43.86%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 1 TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDED-----GDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQ-EGCEYP 495
TV+ LDV Y G WYQ ++ L V E+N CVTADY + T+SV N GS G + GYAY +K++PG+L V P+ PYWV+ LG ++ Y +SIVSDP+RA LF+L RDP +F S+ +ADVL K F F+N P +T Q E C+YP
Sbjct: 238 TVSELDVQSYLGRWYQMFADLVVVSTFERNADCVTADYGLNPNNTISVYNANTDGSPTGPRKAIKGYAYVPNKNEPGQLLVKFPVNPIPGPYWVIQLGPKETTWRNAQPQYQYSIVSDPMRAGLFVLARDPADFR-SRFQADVLQWLKVNQFDHFYNKPIETVQTEACKYP 407
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: UPI0018DA05B6 (uncharacterized protein LOC119736785 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018DA05B6) HSP 1 Score: 134 bits (338), Expect = 8.930e-35 Identity = 77/171 (45.03%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 1 TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDE-----DGDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQ-EGCEYP 495
TV LD++ Y G WYQ ++ L V E+N CVTADYA + T+SV N GS G + GYAY D S+PG+L V PV YWV+ LG + D D Y +SIV+D LRA LF+L RDPD+F S+ +ADVL K F F+N P +T Q + C+YP
Sbjct: 219 TVGELDLNSYLGRWYQMFADLVVDSTFERNAYCVTADYALNPNKTISVYNANTVGSPTGARNAIKGYAYVPDPSQPGQLLVKFPVTPVAGSYWVVQLGPKETTWRDSDPQYQYSIVTDSLRATLFVLARDPDDFR-SRFQADVLQWLKSNQFDHFYNKPVETVQTDDCKYP 388
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: A0A2B4SGV8_STYPI (Outer membrane lipoprotein Blc n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SGV8_STYPI) HSP 1 Score: 129 bits (325), Expect = 3.910e-34 Identity = 68/162 (41.98%), Postives = 97/162 (59.88%), Query Frame = 1
Query: 1 TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDEDG--DGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQE 480
TV +L+V +Y G WYQ Y+ V + E+N CVTADY+ ++DG + V+N R + G+ ++ GYAY D +PGKLT+HLDGVP YWV+ LG +G Y +S+V+D + LF+L RD + F DE +V + E GFT +N P T Q+
Sbjct: 73 TVPSLNVTKYLGRWYQMYADPAVMETSERNAVCVTADYSLRKDGKIGVLNRGRLYTPTGEESSITGYAYMTDPKEPGKLTLHLDGVPFLGSYWVVKLGPPTFGVEGLYQYSVVTDSTQIMLFVLTRDVETFRNQYDE-EVKSFLAENGFTHLYNKPVATLQD 233
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: UPI00148A4A5B (temperature-induced lipocalin-1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A4A5B) HSP 1 Score: 127 bits (320), Expect = 6.190e-34 Identity = 74/168 (44.05%), Postives = 98/168 (58.33%), Query Frame = 1
Query: 4 VTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGT--VSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDED--GDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQEG-CEY 492
V+ LDV +Y G W+Q Y S ++ E+ CVTADY DGT ++V+N+ R S G + + GYA D PGKLTVHL+ V DAPYWV+ LG + Y +++VSD ++A LF+L RDP+ F EA+VL KE GFT+ N P KT E C Y
Sbjct: 38 VSALDVQKYLGRWFQMYGSQSIYATFERGAYCVTADYTLANDGTNHITVLNSERLNSGTGPIKVIHGYATPSDN--PGKLTVHLESVIFDAPYWVIKLGPATYGSENKYQYAVVSDNVKATLFVLARDPEVFQRDY-EAEVLQFLKEKGFTTLVNRPVKTYHESDCIY 202
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Match: UPI001458039A (temperature-induced lipocalin-1-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458039A) HSP 1 Score: 127 bits (319), Expect = 6.850e-34 Identity = 75/169 (44.38%), Postives = 99/169 (58.58%), Query Frame = 1
Query: 1 TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGT--VSVVNTARKGSVDGDLITMDGYAYYKDKSKPGKLTVHLDGVPVDAPYWVLALGDED--GDGPYPWSIVSDPLRAFLFLLVRDPDEFYGSQDEADVLAKCKELGFTSFWNTPQKTSQ-EGCEY 492
TVT LD+ +Y G WYQ Y+S +V E+N CVTADY+K DG+ V V N + +G T+ GYA S+PGKLTV+L+ P APYWV+ LG D Y +S+V+D L+A LF+L RDP+ F +E +VL K+ GFT+F N P Q C Y
Sbjct: 30 TVTELDLPKYLGRWYQMYTSPSVLDTFERNAVCVTADYSKSTDGSGKVIVFNAENLNTPNGTQQTISGYA--TTSSEPGKLTVNLETAPFPAPYWVIKLGPATFGHDDQYQYSLVTDNLKATLFVLARDPETFKRDYNE-EVLQFLKQQGFTTFINKPVSMYQGSDCNY 195 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11644.1293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11644.1293.1 >prot_H-elongata_contig11644.1293.1 ID=prot_H-elongata_contig11644.1293.1|Name=mRNA_H-elongata_contig11644.1293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp TVTTLDVDRYTGSWYQAYSSLTVAKLLEQNGACVTADYAKQEDGTVSVVNback to top mRNA from alignment at H-elongata_contig11644:3701..5384+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11644.1293.1 ID=mRNA_H-elongata_contig11644.1293.1|Name=mRNA_H-elongata_contig11644.1293.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1684bp|location=Sequence derived from alignment at H-elongata_contig11644:3701..5384+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11644:3701..5384+ >mRNA_H-elongata_contig11644.1293.1 ID=mRNA_H-elongata_contig11644.1293.1|Name=mRNA_H-elongata_contig11644.1293.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1008bp|location=Sequence derived from alignment at H-elongata_contig11644:3701..5384+ (Himanthalia elongata Himel1 dioecious)back to top |