mRNA_H-elongata_contig116379.1288.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: D7FH04_ECTSI (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, family GT41 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH04_ECTSI) HSP 1 Score: 169 bits (427), Expect = 3.970e-46 Identity = 99/229 (43.23%), Postives = 109/229 (47.60%), Query Frame = 1
Query: 13 VRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSEREVLEASVPNRAEHGLP------------------------------------------------------------------------------------------------------PGEGGG--VVLCNFNRLHKIDPHTFGVW 387
V VLVNL GYAGT KSAD+FALRPA VAVSYMGFPGTMGS EMVDYILAD VV+P + RRFYSEKVL+MPHCYFVNDY+QSER V+++ P RA+HGL GEG G VVLCNFNRLHK+DPHTFG W
Sbjct: 492 VGVLVNLGGYAGTVKSADIFALRPAAVAVSYMGFPGTMGSSEMVDYILADAVVVPPELRRFYSEKVLDMPHCYFVNDYRQSERGVIDSPAPERADHGLSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAPLVRDGRDYGVGGRSRRATHRRXXXXXXXXXHNGERAAAWSPVPGRWRRGGGRGTMKEQGALENVSREREGEGDGRRVVLCNFNRLHKLDPHTFGAW 720
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: A0A6H5K431_9PHAE (GT41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K431_9PHAE) HSP 1 Score: 162 bits (411), Expect = 5.340e-44 Identity = 101/239 (42.26%), Postives = 111/239 (46.44%), Query Frame = 1
Query: 13 VRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKV-------LEMPHCYFVNDYQQSEREVLEASVPNRAEHGL--PP--------------------------------------------------------GEGGG-------------------------------------------------VVLCNFNRLHKIDPHTFGVW 387
V VLVNL GYAGT KSAD+FALRPA VAVSYMGFPGTMGS EMVDYILAD VV+P D RRFYSEKV L++PHCYFVNDY+QSER V+ + P+RA+HGL PP G GGG VVLCNFNRLHK+DPHTFG W
Sbjct: 466 VGVLVNLGGYAGTVKSADIFALRPAAVAVSYMGFPGTMGSSEMVDYILADAVVVPPDLRRFYSEKVINSCLVVLDLPHCYFVNDYRQSERGVIYSPAPDRADHGLSLPPSPRWPLPLATKEDREGGGILSAAAATSGAAPLVKDGRDDGVGGRSRRASHRRRDGSGRGGGHNGERAAAWSPVPGRWRRGGARGGWGAMKGRGALENVSREREGEGDGRRVVLCNFNRLHKLDPHTFGAW 704
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: A0A835Z2W6_9STRA (Glycosyl transferase family 41-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W6_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.430e-42 Identity = 77/125 (61.60%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 19 VLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSER--EVLEASVPNRAEHGLPPGEGGGVVLCNFNRLHKIDPHTFGVW 387
V +NLNGYAGT KSA++FALRPAP+ VSYMGFPGTMG+ + VDY+LAD V+P R SE VL MPHCYFVNDY+QS E L + P RA+ GLP +V+CNFNRLHK+DP TF W
Sbjct: 296 VAINLNGYAGTVKSAEIFALRPAPLCVSYMGFPGTMGA-DWVDYLLADETVVPRHLRAHVSEHVLAMPHCYFVNDYRQSGAAVEALRGAPPPRAQLGLPDD---AIVVCNFNRLHKLDPVTFAQW 416
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: A0A5D6YC07_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC07_9STRA) HSP 1 Score: 140 bits (352), Expect = 5.190e-37 Identity = 67/126 (53.17%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 13 VRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSEREVLEAS-VPNRAEHGLPPGEGGGVVLCNFNRLHKIDPHTFGVW 387
+ VLVNLNGY A++ +FALRPAP+ VSYMGF GT+G+ + V Y++ D VV+P RRF++EK++ MPH YFVND++QS R+VL+A+ P RA +G+P V CNFN+++KIDP TF W
Sbjct: 158 IHVLVNLNGYTKGARN-KIFALRPAPLQVSYMGFCGTLGA-DYVQYMVGDAVVVPPAHRRFFTEKIISMPHSYFVNDHRQSARDVLDAAKCPTRAHYGVPED---AFVFCNFNQVYKIDPATFATW 278
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: A0A1Y1IN95_KLENI (Protein O-GlcNAc transferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IN95_KLENI) HSP 1 Score: 142 bits (359), Expect = 6.720e-37 Identity = 66/129 (51.16%), Postives = 95/129 (73.64%), Query Frame = 1
Query: 4 ASRVRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSEREVLEA-SVPNRAEHGLPPGEGGGVVLCNFNRLHKIDPHTFGVW 387
A +++VL+NLNGY A++ ++FALRPAP+ VSYMGFPGT G+ E +DY++ D V P + YSEK++ +PHCYFVNDY+QS R+VL+ + P R+++GLP + + C FN+L+K+DP TFG W
Sbjct: 671 ADQIQVLINLNGYTKGARN-EIFALRPAPIQVSYMGFPGTTGA-EYIDYLVTDEFVSPFENAPIYSEKLVHLPHCYFVNDYKQSNRDVLDPQNAPKRSDYGLPEDK---FLFCCFNQLYKMDPQTFGRW 794
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: A0A2D4BUC4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUC4_PYTIN) HSP 1 Score: 141 bits (356), Expect = 1.690e-36 Identity = 67/126 (53.17%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 13 VRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSEREVLEAS-VPNRAEHGLPPGEGGGVVLCNFNRLHKIDPHTFGVW 387
+ VLVNLNGY A++ ++FAL+PAPV VSYMGF GT+G+ + V Y++ D VV+P + RRF+SEK++ MPH YFVND++QS R+VL+ P RA +G+P + V CNFN+++KIDP TF W
Sbjct: 657 IHVLVNLNGYTKGARN-EIFALKPAPVQVSYMGFCGTLGA-DYVHYMIGDAVVVPREHRRFFSEKMINMPHSYFVNDHKQSARDVLDVDKCPTRAHYGVPENQ---FVFCNFNQVYKIDPATFRTW 777
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: K3X4T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4T5_GLOUD) HSP 1 Score: 138 bits (348), Expect = 2.820e-36 Identity = 62/126 (49.21%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 13 VRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSEREVLEAS-VPNRAEHGLPPGEGGGVVLCNFNRLHKIDPHTFGVW 387
+ +L+NLNGY A++ ++FAL+PAPV VSYMGF GT+G+ + + Y++ D V+P + RR++SEK++ MPH YFVND++QS R+VL+ P RA +G+P + V CNFN+++KIDP TF W
Sbjct: 169 IHILINLNGYTKGARN-EIFALKPAPVQVSYMGFCGTLGA-DYIQYMVGDATVVPKEHRRYFSEKIIHMPHSYFVNDHKQSARDVLDVEKCPTRAHYGVPEDK---FVFCNFNQVYKIDPQTFTTW 289
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: A0A8K1FGH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH6_PYTOL) HSP 1 Score: 140 bits (354), Expect = 3.090e-36 Identity = 65/129 (50.39%), Postives = 95/129 (73.64%), Query Frame = 1
Query: 4 ASRVRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSEREVLEAS-VPNRAEHGLPPGEGGGVVLCNFNRLHKIDPHTFGVW 387
A + +LVNLNGY A++ ++FAL+PAP+ VSYMGF GT+G+ + V Y++ D VV+P + RR++SEK++ MPH YFVND++QS R+VL+ P+RA +G+P + V CNFN+++KIDP TF W
Sbjct: 646 ADGIHILVNLNGYTKGARN-EIFALKPAPIQVSYMGFCGTLGA-DYVQYMIGDAVVVPPEHRRYFSEKIINMPHSYFVNDHKQSARDVLDVEKCPSRAHYGVPEDK---FVFCNFNQVYKIDPATFRTW 769
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: A0A7S0XDQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDQ2_9STRA) HSP 1 Score: 132 bits (333), Expect = 5.280e-36 Identity = 59/126 (46.83%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 13 VRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSEREVLEA-SVPNRAEHGLPPGEGGGVVLCNFNRLHKIDPHTFGVW 387
+ +L+NLNGY +K+ ++FAL PAP+ ++Y+G+ GT+G+ E V+YI+ D +VIP R +YSEKV+ MPH YFVND++QS R+V++ ++P R ++G+ V CNFN+L+KIDP F +W
Sbjct: 23 IHILINLNGYTKGSKN-EIFALHPAPIQINYLGYCGTLGA-EYVEYIIGDNIVIPKHLRSYYSEKVISMPHSYFVNDHRQSSRDVVDKINMPTREQYGISED---AFVFCNFNQLYKIDPSIFDIW 143
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Match: F0WMK0_9STRA (Protein O-GlcNAc transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMK0_9STRA) HSP 1 Score: 140 bits (352), Expect = 5.760e-36 Identity = 65/126 (51.59%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 13 VRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYILADGVVIPGDKRRFYSEKVLEMPHCYFVNDYQQSEREVLEAS-VPNRAEHGLPPGEGGGVVLCNFNRLHKIDPHTFGVW 387
+ +LVNLNGY A++ ++FAL PAPV VSYMGF GT+G+ E + Y++ D VV+P + R+F++EK++ MPH YF ND++QS REVL+ S P R ++G+P G+ V CNFN+++KIDP TF W
Sbjct: 648 IHILVNLNGYTKGARN-EIFALGPAPVQVSYMGFCGTLGA-EYIQYMVGDKVVVPPENRQFFTEKIISMPHSYFCNDHKQSAREVLDVSKCPKREQYGVPQGK---FVFCNFNQVYKIDPDTFTTW 768 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116379.1288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig116379.1288.1 >prot_H-elongata_contig116379.1288.1 ID=prot_H-elongata_contig116379.1288.1|Name=mRNA_H-elongata_contig116379.1288.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp RASRVRVLVNLNGYAGTAKSADVFALRPAPVAVSYMGFPGTMGSPEMVDYback to top mRNA from alignment at H-elongata_contig116379:352..1561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig116379.1288.1 ID=mRNA_H-elongata_contig116379.1288.1|Name=mRNA_H-elongata_contig116379.1288.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1210bp|location=Sequence derived from alignment at H-elongata_contig116379:352..1561- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig116379:352..1561- >mRNA_H-elongata_contig116379.1288.1 ID=mRNA_H-elongata_contig116379.1288.1|Name=mRNA_H-elongata_contig116379.1288.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=774bp|location=Sequence derived from alignment at H-elongata_contig116379:352..1561- (Himanthalia elongata Himel1 dioecious)back to top |