mRNA_H-elongata_contig11608.1267.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11608.1267.1
Unique NamemRNA_H-elongata_contig11608.1267.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126X4A8_9PHAE (Putative LOV domain-containing protein n=5 Tax=Sargassum TaxID=3015 RepID=A0A126X4A8_9PHAE)

HSP 1 Score: 492 bits (1267), Expect = 1.240e-160
Identity = 280/374 (74.87%), Postives = 304/374 (81.28%), Query Frame = 3
Query:  132 AVTPAAALLAKAEPVEEPEDDEMQXXXXXXXXXXXXXXXXXELDLGTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINSSSRWSSRGNEGGGS---RSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRSS---GSDSS-RVVDRLRRTRAARAS 1232
            A   AAA L KAEPVE   D E                   EL   TD++DKRRRNREHAKRSRMRKRVRLGGLEGM+LSLRRENVRLR IIKQ IP+RAD IIR CA+DNTNAD+VAKQDVVQGMRP  SI +SSRW SRG  G  S   RSR+KLEGG      GGR K+ CVPSALKLMSPSYQ+VKALSESQANFILTNPNLPDCPIIFASQGF DLTGY+ S+VIGKNCRFLQGPGTD +TVSILRNNLA+GRDTS+CILNYKADGTPFWNQLSIGVLLDA GQVANHVGVLCEV QMPP++FHKLLHRVPLPESLL D+SS+SGED AD +KP  Y AR+GRSS   GS+S+ RVVDRLRRTRAA A+
Sbjct:  222 AAAAAAAELVKAEPVEGSIDHEAPDSEEEDEDHRNINENGDELGSCTDVSDKRRRNREHAKRSRMRKRVRLGGLEGMVLSLRRENVRLRQIIKQGIPDRADEIIRMCAKDNTNADMVAKQDVVQGMRPTTSI-TSSRWKSRGFGGSSSSISRSRLKLEGGGE----GGRSKERCVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHRVPLPESLLADESSDSGEDTAD-IKPNMYSARLGRSSSLGGSESAPRVVDRLRRTRAAAAT 589          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126X144_SACJA (Putative LOV domain-containing protein n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A126X144_SACJA)

HSP 1 Score: 429 bits (1102), Expect = 1.060e-137
Identity = 245/350 (70.00%), Postives = 267/350 (76.29%), Query Frame = 3
Query:  255 ELDLGTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSI-NSSSRWSSR--GNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRSSGS----------------------DSSRVVDRLRRTRAARA 1229
            ELD G++L DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLR I+K+ IPERAD I+R CA DNTN D VAKQDVVQGMRP +S+ +SSS WSSR         RSR KLEGG R    GG  KD  VPSALKLMSP YQSVKAL+ESQANF+LTNPNLPDCPIIFASQGF +LTGY+  +VIGKNCRFLQGPGTD  TVSI+RNNLA GRDTS+CILNYKADGTPFWNQLSIGVLLDA GQVANHVGVLCEV QMPPAVFH+LLHRVPLPESLL D+SS+S ED +D M        VG +                          S RVVDRLRRTRAA A
Sbjct:  137 ELDTGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRRIVKKGIPERADSILRLCASDNTNPDTVAKQDVVQGMRPGMSVGSSSSNWSSRLGXXXXXXXRSRPKLEGGTRRH--GGGSKDRRVPSALKLMSPCYQSVKALAESQANFVLTNPNLPDCPIIFASQGFLELTGYEGRQVIGKNCRFLQGPGTDPGTVSIIRNNLAGGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPAVFHRLLHRVPLPESLLNDESSDS-EDSSDTM------VNVGTTXXXXXXXXXXXXXXXXXXXXXXXXVSSPRVVDRLRRTRAAAA 477          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WZI8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZI8_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 1.280e-131
Identity = 230/326 (70.55%), Postives = 264/326 (80.98%), Query Frame = 3
Query:  270 TDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINSSSRWSSRGNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRSSGSDSS------RVVDRLRRTRAARA 1229
            +DL++KRRRNREHAKRSRMRKR+RLGGLE M+L LRRENVRLR ++K+ IP+RA+ IIRTCA DN +ADLVAKQDVVQGMRP++++  +S W SR +  GGSR+R K++  +RH       K   VPSALKLMSPSYQSVKALSESQANFILTNPNLP CPIIFAS GF DLTGY+ S+VIGKNCRFLQGPGTD +TVSI+R NLA GRDTS+CILNYKADGTPFWNQLSIG LLD+QGQVAN+VGVLCEVKQMP A FH+LLHRVPLPESLL D SS+SG++ AD     +     GRS     +      RVVDRLRRTRAA A
Sbjct:  249 SDLSEKRRRNREHAKRSRMRKRMRLGGLEEMVLELRRENVRLRQMVKKGIPDRAEDIIRTCASDNADADLVAKQDVVQGMRPSMAVTGASGWGSRFS--GGSRTRPKVD--SRHSG----NKYRSVPSALKLMSPSYQSVKALSESQANFILTNPNLPGCPIIFASPGFVDLTGYEASQVIGKNCRFLQGPGTDPVTVSIIRKNLAEGRDTSVCILNYKADGTPFWNQLSIGNLLDSQGQVANNVGVLCEVKQMPAADFHRLLHRVPLPESLLNDTSSDSGDEAADSKSFGRSRNAGGRSMADGVAGAPAYPRVVDRLRRTRAASA 566          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WV95_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV95_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 2.320e-129
Identity = 228/326 (69.94%), Postives = 265/326 (81.29%), Query Frame = 3
Query:  267 GTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINS-SSRWSSRGNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGAR----VGR--SSGSDSSRVVDRLRRTRAA 1223
            G++L++KRRRNREHAKRSRMRKRVRLGGLE  +L LRRENVRLR I+KQ IP+RAD IIRTCA DNT+ADLV KQDVVQGMRP ++ NS ++ W +R +E    R+  ++EGG R  S+    +D  VPSALKLMSPSYQSV AL+ESQANFILTNPNLPDCPIIFAS GF DLTGY  S+VIGKNCRFLQG GTD +TVSI+RNNL +GRDTS+CILNYKADGTPFWNQLSIGVLLD+ G+VANHVGVLCEVKQMPPA FH+LLHRVPLPESLL DDS +SG+D++D     +   R    V R  S+   + + VDRLRRTRA+
Sbjct:  235 GSELSEKRRRNREHAKRSRMRKRVRLGGLEEAVLELRRENVRLRQIVKQGIPDRADDIIRTCASDNTDADLVDKQDVVQGMRPGMTTNSLAAGWGTRTSER--VRNNARVEGGGRKPSS----RDLRVPSALKLMSPSYQSVTALAESQANFILTNPNLPDCPIIFASPGFMDLTGYDASDVIGKNCRFLQGAGTDPVTVSIIRNNLTDGRDTSVCILNYKADGTPFWNQLSIGVLLDSHGRVANHVGVLCEVKQMPPADFHRLLHRVPLPESLLVDDS-DSGDDLSDGCGRAQSNVRSTSLVDRQESNSPAAPKTVDRLRRTRAS 553          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126X3Q0_PETFA (Putative LOV domain-containing protein n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A126X3Q0_PETFA)

HSP 1 Score: 407 bits (1045), Expect = 4.290e-126
Identity = 231/358 (64.53%), Postives = 268/358 (74.86%), Query Frame = 3
Query:  264 LGTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSI-NSSSRWSSRGNEGGGSRSRVKLEGGA--RHRSAGGRG-----KDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSES--GEDIADDMKPPKYGARVGRSSGSDSS-------------------------RVVDRLRRTRAARAS 1232
            +G++L DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLR ++ + IP+RA  IIR CA+DNTNADLVAKQDVVQGMRP +S+ +SSS WS+RG    G+RSR KLEGG+  R R +GGRG     KD  VPSALKLMSP YQ+VKAL++SQANFILTNPNLPDCPIIFASQGF +LTGY+  +VIG+NCR LQGPGTD +T+SI+R+N+  GRD S+CILNYK DG PFWNQLSIGVLLDA GQVANHV V+ EV  MPPAVFH+LLHRVPLPESLL DDS     GE  + D + P   + V   S + SS                         RVVDRLRRTRAA A+
Sbjct:  358 VGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGSIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARG----GTRSRPKLEGGSSSRKRGSGGRGGGTGSKDRRVPSALKLMSPCYQTVKALADSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRLLQGPGTDPITLSIVRDNVEAGRDASVCILNYKKDGAPFWNQLSIGVLLDAHGQVANHVAVMYEVNPMPPAVFHRLLHRVPLPESLLNDDSGSDSDGEINSKDRRDPVERSEVAAGSFNHSSVGGXXXXXXXXXXXXXXXXXXXXXPRVVDRLRRTRAAAAA 711          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WZ47_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126WZ47_SARFS)

HSP 1 Score: 385 bits (989), Expect = 1.220e-123
Identity = 208/265 (78.49%), Postives = 226/265 (85.28%), Query Frame = 3
Query:  450 CARDNTNADLVAKQDVVQGMRPALSINSSSRWSSRGNEGGGS---RSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRS----SGSDSSRVVDRLRRTRAA 1223
            CARDNTNAD+VAKQDVVQGMRP  SI +SSRW SRG  G  S   RSR+KL+GG      GGR K+H VPSALKLMSPSYQ+VKALSESQANFILTNPNLPDCPIIFASQGF DLTGY+ S+VIGKNCRFLQGPGTD +TVSILRNNLA+GRDTS+CILNYKADGTPFWNQLSIGVLLDA GQVANHVGVLCEV QMPP++FHKLLHRVPLPESLL D+SS+SGED AD  KP  Y AR+GRS    S   +SRVVDRLRRTR +
Sbjct:    2 CARDNTNADMVAKQDVVQGMRPTTSI-TSSRWKSRGFGGSSSSIPRSRLKLDGGGE----GGRSKEHRVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHRVPLPESLLADESSDSGEDTAD-TKPNIYSARMGRSGSLGSSESASRVVDRLRRTRCS 260          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126X2D8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D8_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 1.400e-121
Identity = 229/366 (62.57%), Postives = 268/366 (73.22%), Query Frame = 3
Query:  264 LGTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSI-NSSSRWSSRGNEGGGSRSRVKLEGGARHRSAGGR---------------GKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDS-SES-GEDIADDMKPPKYGARVGRSSGSDSS-------------------------RVVDRLRRTRAARAS 1232
            +G++L DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLR ++ + IP+RA  IIR CA+DNTNADLVAKQDVVQGMRP +S+ +SSS WS+RG    G+RSR KLEGG+   S+  R                KD  VPSALKLMSPSYQ+VKAL++SQANF LTNPNLPDCPIIFASQGF +LTGY+  +VIG+NCRFL+GPGTD +T+SI+RNN+  GRD S+CILNYK DGTPFWNQLSIGVLLDA GQVANHV V  EV  MPPAVFH+LLHRVPLPESLL D+S SES G+  ++  + P   + V   S + SS                         RVVDRLRRTRAA A+
Sbjct:  355 VGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGAIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARG----GTRSRPKLEGGS---SSSRRXXXXXXXXXXXXXXGSKDRRVPSALKLMSPSYQTVKALADSQANFFLTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRFLEGPGTDPVTLSIVRNNVEAGRDASVCILNYKKDGTPFWNQLSIGVLLDAHGQVANHVAVTYEVNPMPPAVFHRLLHRVPLPESLLNDESGSESDGDSNSNHRRDPVERSEVAAGSFNHSSAXXXXXXXXXXXXXXXXSGAGVAVPRVVDRLRRTRAAAAA 713          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A6H5K3S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S9_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 3.550e-121
Identity = 224/351 (63.82%), Postives = 258/351 (73.50%), Query Frame = 3
Query:  267 GTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSI-NSSSRWSSRGNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYG------------------ARVGRSSGS-----------DSSRVVDRLRRTRAARA 1229
            GT+L DKRRRNREHAKRSR+RKRVRLGGLE +LL LRRENVRLR +I + IP+RA  IIR C +DNTNAD+VAKQDV+QGMRP +S+ +SSS W++RG    G+R+R K  GG         GK   VPSALKLMSP YQ+VKAL++SQANF+LTNPNLPDCPIIFASQGF DLTGY  ++VIGKNCRFLQGPGTD +T+SI+RNN+A G DTS+CILNYK D T FWNQLSIGVLLD+ GQVANHVGV+CEV QMPPAVFH+LLHRVPLPESLL DDS +S  D  D+ +                       AR    SG             SSR+VDRL RTRAA A
Sbjct:  362 GTELTDKRRRNREHAKRSRLRKRVRLGGLEELLLGLRRENVRLRKVIMRGIPDRAGAIIRNCTKDNTNADVVAKQDVIQGMRPGMSVGSSSSSWTARG----GTRTRPKPAGGXXX-----SGKGRYVPSALKLMSPCYQTVKALADSQANFVLTNPNLPDCPIIFASQGFLDLTGYDGNDVIGKNCRFLQGPGTDPVTLSIIRNNVAAGLDTSVCILNYKKDKTQFWNQLSIGVLLDSHGQVANHVGVMCEVNQMPPAVFHRLLHRVPLPESLLHDDS-DSDSDGHDNHRVSXXXXXXXXXXXXXXXXXXXXRARASSVSGDVPDKGAAXXXXASSRIVDRLHRTRAAAA 702          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WUW4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WUW4_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 5.520e-109
Identity = 199/328 (60.67%), Postives = 230/328 (70.12%), Query Frame = 3
Query:  360 MLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAK---QDVVQGMRPALSINSSSR-WSSRGNEGGGSRSRVKLEGGARHR--SAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGRSS-------------------------------GSDSSRVVDRLRRTRAARAS 1232
            M+L LRRENVRLR ++   IP+RA  IIRTCA+ N           QDVVQGMRP +S+ SSS  WS+RG    G+R R+K EGG+     S+GGR KDH VPSALKLMSPSYQ+VKAL +SQANFILTNPNLPDCPIIFASQGF +LTGY+  +VIGKNCRFLQGPGTDK+T+SI+RNNLA GRD S+CILNYK +GTPFWNQLS+GVLLDA GQVANHVGV+CEV QMPP VFH+LLHRVPLPESLL DDS    + + D ++  +  A   R S                                S   RVVDRLRRTRAA A+
Sbjct:    1 MVLGLRRENVRLRQLVMSGIPDRAAAIIRTCAKGNXXXXXXXXXXXQDVVQGMRPGMSVGSSSASWSARG----GTRKRIKAEGGSGGGGVSSGGR-KDHRVPSALKLMSPSYQTVKALVDSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGKNCRFLQGPGTDKMTLSIVRNNLAAGRDVSVCILNYKKNGTPFWNQLSVGVLLDAHGQVANHVGVMCEVSQMPPPVFHRLLHRVPLPESLLHDDSGSESDGVDDHVERSRVSAGSFRHSDGTKGGGNSXXXXXXXXXXXXXXXXXXSAARSSTGPRVVDRLRRTRAAAAA 323          
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Match: A0A126WUS5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WUS5_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 1.340e-101
Identity = 197/351 (56.13%), Postives = 244/351 (69.52%), Query Frame = 3
Query:  273 DLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQSIPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINSS--------------SRWSSRGNEGGGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQANFILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVSILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLCEVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDM------KPPKY-----GARVGRSS-----GSDSSRVVDRLRRTRAARAST 1235
            +L+DKRRRNREHAK+SR+RKR  LGGLE  LL LRREN+ LR + K++IP+RA+ IIR CA  +T+ D+V K+D+VQGMRP+ SI+                 R S   N GG S    +L G    R   GR ++  VPSA KLMSPS+  V AL+ESQANF+LTNPN+P  PI+FASQGF  LTGY   +V+G+NCRFLQG GTD + VSILRNN+A+GRDTS+CILNYKA GTPFWNQLS+G LLDA+G++ANHVGV+ E+KQMP A FH+LLHRVPLPE LL+D+SSE  E  +D M       P K      GA+ G+       G   + VVD LRRTRA  A++
Sbjct:  181 ELSDKRRRNREHAKQSRLRKRALLGGLEETLLELRRENMCLRQLAKKTIPDRAENIIRECAYVSTDPDVVVKRDIVQGMRPSSSISFRISQATSHASHEKLHGRVSPSENRGGTSNGSTELRG----RGRAGRDRER-VPSATKLMSPSHHVVSALAESQANFVLTNPNIPGSPIVFASQGFQALTGYAAEQVVGRNCRFLQGVGTDPMVVSILRNNIAHGRDTSVCILNYKACGTPFWNQLSVGTLLDAEGRIANHVGVMYEIKQMPQADFHRLLHRVPLPEKLLQDESSEDDERESDLMDNEGATNPSKSQRGNTGAKGGQGQSVGGGGKARTHVVDSLRRTRAGSAAS 526          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11608.1267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126X4A8_9PHAE1.240e-16074.87Putative LOV domain-containing protein n=5 Tax=Sar... [more]
A0A126X144_SACJA1.060e-13770.00Putative LOV domain-containing protein n=3 Tax=Sac... [more]
A0A126WZI8_9PHAE1.280e-13170.55Putative LOV domain-containing protein n=1 Tax=Dic... [more]
A0A126WV95_9PHAE2.320e-12969.94Putative LOV domain-containing protein n=1 Tax=Ish... [more]
A0A126X3Q0_PETFA4.290e-12664.53Putative LOV domain-containing protein n=1 Tax=Pet... [more]
A0A126WZ47_SARFS1.220e-12378.49Putative LOV domain-containing protein n=1 Tax=Sar... [more]
A0A126X2D8_9PHAE1.400e-12162.57Putative LOV domain-containing protein n=1 Tax=Scy... [more]
A0A6H5K3S9_9PHAE3.550e-12163.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A126WUW4_9PHAE5.520e-10960.67Putative LOV domain-containing protein n=1 Tax=Pun... [more]
A0A126WUS5_9PHAE1.340e-10156.13Putative LOV domain-containing protein n=1 Tax=Ish... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11608contigH-elongata_contig11608:757..4457 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.0
Seed ortholog evalue3.7e-85
Seed eggNOG ortholog2880.D7FQI9
KEGG koko:K14858,ko:K20715
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
EggNOG free text desc.PAS domain
EggNOG OGs2QU3S@2759,COG2202@1
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionaureochrome 5
Ec32 orthologEc-01_008850.1
Exons5
Model size2759
Cds size1128
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929674.1826985-UTR-H-elongata_contig11608:756..8721622929674.1826985-UTR-H-elongata_contig11608:756..872Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11608 757..872 +
1691679114.6917598-UTR-H-elongata_contig11608:756..8721691679114.6917598-UTR-H-elongata_contig11608:756..872Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11608 757..872 +
1622929674.2914622-UTR-H-elongata_contig11608:2853..32381622929674.2914622-UTR-H-elongata_contig11608:2853..3238Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11608 2854..3238 +
1691679114.7421315-UTR-H-elongata_contig11608:2853..32381691679114.7421315-UTR-H-elongata_contig11608:2853..3238Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11608 2854..3238 +
1622929674.3090546-UTR-H-elongata_contig11608:3327..44571622929674.3090546-UTR-H-elongata_contig11608:3327..4457Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11608 3328..4457 +
1691679114.7541978-UTR-H-elongata_contig11608:3327..44571691679114.7541978-UTR-H-elongata_contig11608:3327..4457Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11608 3328..4457 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929674.2083528-CDS-H-elongata_contig11608:872..15261622929674.2083528-CDS-H-elongata_contig11608:872..1526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11608 873..1526 +
1691679114.7080994-CDS-H-elongata_contig11608:872..15261691679114.7080994-CDS-H-elongata_contig11608:872..1526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11608 873..1526 +
1622929674.24-CDS-H-elongata_contig11608:1860..20361622929674.24-CDS-H-elongata_contig11608:1860..2036Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11608 1861..2036 +
1691679114.7178037-CDS-H-elongata_contig11608:1860..20361691679114.7178037-CDS-H-elongata_contig11608:1860..2036Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11608 1861..2036 +
1622929674.2555559-CDS-H-elongata_contig11608:2304..24211622929674.2555559-CDS-H-elongata_contig11608:2304..2421Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11608 2305..2421 +
1691679114.7268426-CDS-H-elongata_contig11608:2304..24211691679114.7268426-CDS-H-elongata_contig11608:2304..2421Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11608 2305..2421 +
1622929674.2712932-CDS-H-elongata_contig11608:2672..28531622929674.2712932-CDS-H-elongata_contig11608:2672..2853Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11608 2673..2853 +
1691679114.7343721-CDS-H-elongata_contig11608:2672..28531691679114.7343721-CDS-H-elongata_contig11608:2672..2853Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11608 2673..2853 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11608.1267.1prot_H-elongata_contig11608.1267.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11608 873..2853 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11608.1267.1

>prot_H-elongata_contig11608.1267.1 ID=prot_H-elongata_contig11608.1267.1|Name=mRNA_H-elongata_contig11608.1267.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=376bp
MSRPAAVTPAAALLAKAEPVEEPEDDEMQEPEEDEDEDFVKKEDDDELDL
GTDLNDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRHIIKQS
IPERADGIIRTCARDNTNADLVAKQDVVQGMRPALSINSSSRWSSRGNEG
GGSRSRVKLEGGARHRSAGGRGKDHCVPSALKLMSPSYQSVKALSESQAN
FILTNPNLPDCPIIFASQGFFDLTGYKPSEVIGKNCRFLQGPGTDKLTVS
ILRNNLANGRDTSMCILNYKADGTPFWNQLSIGVLLDAQGQVANHVGVLC
EVKQMPPAVFHKLLHRVPLPESLLKDDSSESGEDIADDMKPPKYGARVGR
SSGSDSSRVVDRLRRTRAARASTVI*
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mRNA from alignment at H-elongata_contig11608:757..4457+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11608.1267.1 ID=mRNA_H-elongata_contig11608.1267.1|Name=mRNA_H-elongata_contig11608.1267.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3701bp|location=Sequence derived from alignment at H-elongata_contig11608:757..4457+ (Himanthalia elongata Himel1 dioecious)
CAGTTACCAAAAATAAAGGCGCGCTGCTTTCGGCTAGTTCTGCTGAATCT TCAGCCCCGCAGCTCACGAAGGCGGTAGAATCTACTGCCGTCGTAGCAGC CCCCGCTGCTGGGAAAATGAGTCGTCCTGCAGCAGTCACCCCCGCCGCAG CCCTGCTGGCGAAGGCTGAGCCCGTCGAAGAGCCGGAAGATGACGAAATG CAAGAGCCGGAGGAAGACGAAGATGAAGACTTCGTGAAGAAGGAGGATGA TGACGAGCTCGACCTAGGGACAGATCTGAACGACAAGAGGCGGCGCAACC GCGAGCACGCCAAGCGTAGCCGCATGCGGAAGCGGGTACGCCTGGGTGGT CTGGAGGGAATGCTTCTGTCGCTCCGCCGGGAAAACGTCCGCCTCCGGCA CATCATCAAGCAGAGCATCCCCGAGCGCGCGGATGGCATAATCCGAACTT GTGCTCGAGACAACACGAACGCTGATCTCGTCGCAAAGCAAGACGTCGTA CAGGGGATGCGCCCGGCGTTGTCCATTAACTCGTCGTCGAGGTGGAGTTC CCGTGGCAATGAAGGTGGCGGCTCTCGCTCGCGCGTGAAGCTGGAGGGCG GCGCACGCCATCGCAGCGCAGGTGGCCGGGGCAAGGACCACTGTGTCCCC TCCGCGTTAAAGCTCATGTCCCCCAGCTACCAGAGCGTGAAGGCGTTGTC CGAGAGTCAGGCCAACTTCATTCTCACGAATCCTAACCTTCCAGACTGTC CAATAATCTTTGCGAGCCAGGTGAGAGTCGTGGTACTTTAGACCCCGTGC GACTGAAAGGCTCATCGGTAGAATATGCGAGTCAAATAGATTCCAAGCGC GTTTTGCGCGGACGACCCGATATGTGCAGTTAGAACCAGATACACAATTT CCTTCCTCCACTAGAGATCCCCAATCTCAACCGGCGGCAAAGGTGTATTT CCATGAATTATGGAGTGTACAAGTGCGCGCGAATGCTCCTAGTCCAGTCG CGAACTCGTTAGTTTTTTAAGTAGCATCATGGATGTTCCGTTCCTGCTCT TGATGTGACCATCCGTAAAACCCATTTCCTTTTACTCTAATCAAACATGG CCAGGGTTTCTTTGATCTGACCGGCTACAAGCCAAGTGAGGTCATCGGGA AAAATTGTCGCTTTCTTCAGGGACCCGGGACGGACAAACTGACCGTGTCC ATCTTGCGAAACAACCTTGCTAACGGGCGGGATACGAGCATGTGCATACT GAACTATAAAGCCGACGGAACTCCGTTTTGGTGAGTCACCCCGCTTATGC GAAACTAAGATAAATCATAAGATAAGAGACAGAGCAGTCTTAGCGCAGCG ATGCAGAGCAGTAAATGGAGAAGCTGGAAAAGTTGATATATCACTCTAGT AAGGGACAAAAATATGTTGATATATCACTCTAGTAACGGACAATAAGATG TTGATAATATCCTCTTGCGCCTAGAAAGCCTGTTACACATACTCACGAGT TTTTTTCGCCGGCTTTCCTCCGTGCGTTGTGCCCCTCGCGATGCGCAGGA ACCAACTTTCCATAGGTGTCTTGTTGGACGCGCAGGGCCAGGTCGCGAAC CACGTTGGCGTTCTCTGCGAGGTCAAACAGATGCCGCCGGCTGTCTTTCA CAAGTTGCTACACAGGTGAGCTTGACTTCGGTTGTGGCGACACACTCTTC GCATGTTACGGTGGTGATTCCTGAGCACGACAACTTTGTGTTCTAGCGGT TGCTCGACAAACTTTCGCTCTTCTTTTTTACATGTATATGCGGATTATCC CACCCTCAACTCCCAACCTCCATCTTCTCACGTGTTCAGGCAAAATAAAC ATCTTTCGCCTCCTGCCCTAGTCACCCAACCTTTTCTGAACCACACGTGC TTGTGTCCCCGTTCAGGGTTCCGTTGCCAGAAAGTCTTCTCAAAGATGAT TCTTCCGAGAGCGGAGAAGATATCGCGGACGACATGAAGCCACCCAAGTA TGGCGCTCGCGTGGGAAGATCCAGCGGCTCGGATTCTTCAAGAGTGGTTG ACCGTCTTCGGAGGACGCGCGCGGCGAGAGCCAGCACCGTAATCTGAAGG GTTCCGCAGGATCTATAATTCGTAGGCACCAACCGCTGCAATGCGTCGCG GTTGATTTTGGCATTTTGGAATGGAAAACATAAAAACGTGTGACGTCAGA TGAAAGGGTGAAATGGCCTTTTTTACCGAGGGATAGAAAGGGTTGCGTAT TTCTTCAATTATTTCATGGCTGCCCTTTTGACTCTAAACGTGGAAAGGGG TGTTGTGTTCGAGTACTTTTAAGGACCAACGTGGATCCTTTCTTGTACTG CAACTGTTCCTTGGGCTGCCGGCGTAATTTGGTGCAATGGTGCGGTTAAC TTTGAGGTTGCAGTAGCAGTAACTAAAGCATCTTGGGCCGGTATACACCC CGTTTGCACCGACCTAGGCCTGGTTTGCCGCGCTCTCCGTGAACCGAAGG GTTGCTTGAGTACCTCGCACAGGAGTTTCAAGGATGCCTTGCGGCTATAT ATTTATGTATATATATATATATATATATATATATATATATACTGCCGTAC ACAAGTGCGCGATGGATTCCGCAACACAAATCACGGGGACGGGTGATGCG AGGGCGAAAGAGAGGGTTGGAGCCATCTCCTAATCATTGTTTTGGACGAG GGTTAGAGGGACTGTTAGACATTTTAAGTGAACCCCCTTTTATTATATAC TTAAGCAGAGTACCTCTCGTGCTTTGGTCTCTTATTTCGCCTAGAATGTG AAATGCTTGTCTGTAGGTTGGAATACAAAGGGTCCAAATCAGGCGGCGTC AAAGGCGCCATAGTCGTCTGGGTATTAGAGGGTGATTTGTCCGGAGTGCG CGGAATGTGCAACACGTGCTGTACTTATACCCTTAGTCTTAATTCATTTT CGTGGGCGAGGTTGGTGGACCGTGGTGTGGAGGGGCTGTACAATTTTCCC TAGCGTGTGTGCAGTACACTTGAGGTGTGTGATTTTCTCCCTAGTCTCCT ATCGTCGAAATTTTTATATTTCGGCCACAGACGGGGGACAAAACCCTGAT CCCGACTTCTTTTTCCTCTTCCCGCTTGTTTGGGGGGAATAGTTTGCTGT AGGAATCTCTTGTAAGCATCAGGAGTAAGATTTTTGTGAAGATTGCCTAA CTTTGATGCACAAAGTGAGTGCACCACCTTCGAACGCTCGATTGATTGGA GTAAAACTCTATAGAAAACGCAAGTGCTACTTGATATCACGTTGCATGAG ACTCAGCTGTACCGACCGCTAATAATGTTGTATTCCGCGAATCAGTGTAA TGTATCATAACGGTACTCCGTCTTTTAAATAATACAGTACTATACTATGC ATTGTTGAGTACCTACGGAAGGAAGTAGCTATAGCTTGTGTATTGTGCAT GCCGTGCACGAACCTTCGATTGCTGGATGTAAAGCTCAAAACAAAACCCG GCTGCTTCTTCATATGACGTCATACCAAACTTTCAGACTTGTATACCAAC CTCGATCATTATTATTCAGGTTGGAAGGGTCAATCACAAACATCCTACAA TCAGCGTTTTTGAACTACTGAAGGAAGTGTAGTGGATACATATTCTGTGT TTATCACACGTAATATATTATAATAGAAAGTACCATCTATATATGGTTGC C
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Coding sequence (CDS) from alignment at H-elongata_contig11608:757..4457+

>mRNA_H-elongata_contig11608.1267.1 ID=mRNA_H-elongata_contig11608.1267.1|Name=mRNA_H-elongata_contig11608.1267.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2256bp|location=Sequence derived from alignment at H-elongata_contig11608:757..4457+ (Himanthalia elongata Himel1 dioecious)
ATGAGTCGTCCTGCAGCAGTCACCCCCGCCGCAGCCCTGCTGGCGAAGGC
TGAGCCCGTCGAAGAGCCGGAAGATGACGAAATGCAAGAGCCGGAGGAAG
ACGAAGATGAAGACTTCGTGAAGAAGGAGGATGATGACGAGCTCGACCTA
GGGACAGATCTGAACGACAAGAGGCGGCGCAACCGCGAGCACGCCAAGCG
TAGCCGCATGCGGAAGCGGGTACGCCTGGGTGGTCTGGAGGGAATGCTTC
TGTCGCTCCGCCGGGAAAACGTCCGCCTCCGGCACATCATCAAGCAGAGC
ATCCCCGAGCGCGCGGATGGCATAATCCGAACTTGTGCTCGAGACAACAC
GAACGCTGATCTCGTCGCAAAGCAAGACGTCGTACAGGGGATGCGCCCGG
CGTTGTCCATTAACTCGTCGTCGAGGTGGAGTTCCCGTGGCAATGAAGGT
GGCGGCTCTCGCTCGCGCGTGAAGCTGGAGGGCGGCGCACGCCATCGCAG
CGCAGGTGGCCGGGGCAAGGACCACTGTGTCCCCTCCGCGTTAAAGCTCA
TGTCCCCCAGCTACCAGAGCGTGAAGGCGTTGTCCGAGAGTCAGGCCAAC
TTCATTCTCACGAATCCTAACCTTCCAGACTGTCCAATAATCTTTGCGAG
CCAGATGAGTCGTCCTGCAGCAGTCACCCCCGCCGCAGCCCTGCTGGCGA
AGGCTGAGCCCGTCGAAGAGCCGGAAGATGACGAAATGCAAGAGCCGGAG
GAAGACGAAGATGAAGACTTCGTGAAGAAGGAGGATGATGACGAGCTCGA
CCTAGGGACAGATCTGAACGACAAGAGGCGGCGCAACCGCGAGCACGCCA
AGCGTAGCCGCATGCGGAAGCGGGTACGCCTGGGTGGTCTGGAGGGAATG
CTTCTGTCGCTCCGCCGGGAAAACGTCCGCCTCCGGCACATCATCAAGCA
GAGCATCCCCGAGCGCGCGGATGGCATAATCCGAACTTGTGCTCGAGACA
ACACGAACGCTGATCTCGTCGCAAAGCAAGACGTCGTACAGGGGATGCGC
CCGGCGTTGTCCATTAACTCGTCGTCGAGGTGGAGTTCCCGTGGCAATGA
AGGTGGCGGCTCTCGCTCGCGCGTGAAGCTGGAGGGCGGCGCACGCCATC
GCAGCGCAGGTGGCCGGGGCAAGGACCACTGTGTCCCCTCCGCGTTAAAG
CTCATGTCCCCCAGCTACCAGAGCGTGAAGGCGTTGTCCGAGAGTCAGGC
CAACTTCATTCTCACGAATCCTAACCTTCCAGACTGTCCAATAATCTTTG
CGAGCCAGGGTTTCTTTGATCTGACCGGCTACAAGCCAAGTGAGGTCATC
GGGAAAAATTGTCGCTTTCTTCAGGGACCCGGGACGGACAAACTGACCGT
GTCCATCTTGCGAAACAACCTTGCTAACGGGCGGGATACGAGCATGTGCA
TACTGAACTATAAAGCCGACGGAACTCCGTTTTGGGTTTCTTTGATCTGA
CCGGCTACAAGCCAAGTGAGGTCATCGGGAAAAATTGTCGCTTTCTTCAG
GGACCCGGGACGGACAAACTGACCGTGTCCATCTTGCGAAACAACCTTGC
TAACGGGCGGGATACGAGCATGTGCATACTGAACTATAAAGCCGACGGAA
CTCCGTTTTGGAACCAACTTTCCATAGGTGTCTTGTTGGACGCGCAGGGC
CAGGTCGCGAACCACGTTGGCGTTCTCTGCGAGGTCAAACAGATGCCGCC
GGCTGTCTTTCACAAGTTGCTACACAGGAACCAACTTTCCATAGGTGTCT
TGTTGGACGCGCAGGGCCAGGTCGCGAACCACGTTGGCGTTCTCTGCGAG
GTCAAACAGATGCCGCCGGCTGTCTTTCACAAGTTGCTACACAGGGTTCC
GTTGCCAGAAAGTCTTCTCAAAGATGATTCTTCCGAGAGCGGAGAAGATA
TCGCGGACGACATGAAGCCACCCAAGTATGGCGCTCGCGTGGGAAGATCC
AGCGGCTCGGATTCTTCAAGAGTGGTTGACCGTCTTCGGAGGACGCGCGC
GGCGAGAGCCAGCACCGTAATCTGAGGTTCCGTTGCCAGAAAGTCTTCTC
AAAGATGATTCTTCCGAGAGCGGAGAAGATATCGCGGACGACATGAAGCC
ACCCAAGTATGGCGCTCGCGTGGGAAGATCCAGCGGCTCGGATTCTTCAA
GAGTGGTTGACCGTCTTCGGAGGACGCGCGCGGCGAGAGCCAGCACCGTA
ATCTGA
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