mRNA_H-elongata_contig116037.1262.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: A0A6H5JE50_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE50_9PHAE) HSP 1 Score: 374 bits (961), Expect = 1.660e-127 Identity = 180/226 (79.65%), Postives = 205/226 (90.71%), Query Frame = 1
Query: 4 ASQGRSSTAPSMVLITRNERVTSTNNRVETTIPNVNGAAVLDSWQYKVLDFLFSIPIFNDALFGYYRKKMVKKAEGMGIKWTAFLEDLERNKENLLRAQEQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNSVHGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAISLTKLEKKSISVKSKV 681
A +GRS APSMVLITRNERVTSTNNRV+TTIPNV+GAAVL++WQ+KVLD+LFSIP+FNDALFG YRK+ VKKAEGMGIKWTAFL+DL RNKE LL Q ++TD +L IP+YY+APIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNS+HGDVLMRRDWIDTCLKY EVKN++DLGCGTGLSM+MVQ+AWP ADL+GVD+ST+KLAIS KLEKK S++SKV
Sbjct: 46 APRGRSVEAPSMVLITRNERVTSTNNRVDTTIPNVDGAAVLETWQFKVLDYLFSIPLFNDALFGVYRKQQVKKAEGMGIKWTAFLDDLNRNKERLLNIQSEMTDASLDIPEYYYAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNSIHGDVLMRRDWIDTCLKYKPPGEVKNVIDLGCGTGLSMYMVQTAWPQADLVGVDMSTYKLAISQAKLEKKPESMQSKV 271
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: A0A835YXI6_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXI6_9STRA) HSP 1 Score: 292 bits (747), Expect = 9.160e-96 Identity = 144/215 (66.98%), Postives = 170/215 (79.07%), Query Frame = 1
Query: 37 MVLITRNERVTSTNNRVETTIPNVNGAAVLDSWQYKVLDFLFSIPIFNDALFGYYRKKMVKKAEGMGIKWTAFLEDLERNKENLLRAQEQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNSVHGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAISLTKLEKKSISVKSKV 681
MVL TRNE V S N R TIPN +G V+D+WQ+K+LD LFS P+FN ALFG YRK+MV KAEGMGI WTAFL DL+ L Q ++TD A+ IP YY+APIHAYADGNLCWDSAMEEDLWSKLMIAPLF+NSVHGDVLMRRDW+D ++ +V+ I+DLGCGTGLSMFMVQS WP A L G+DLST+KLA++ TKLEKK+ V+S+V
Sbjct: 1 MVLTTRNEAVASVNTR-RVTIPNPDGGKVMDTWQFKLLDQLFSFPLFNAALFGVYRKQMVTKAEGMGIPWTAFLADLKAKMAQLRATQARMTDAAVVIPDYYYAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFDNSVHGDVLMRRDWLDAARRHTG--DVREIIDLGCGTGLSMFMVQSTWPRAHLTGIDLSTYKLALAQTKLEKKAPEVRSRV 212
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: A0A7S4D7M6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7M6_HETAK) HSP 1 Score: 211 bits (536), Expect = 1.180e-63 Identity = 98/173 (56.65%), Postives = 123/173 (71.10%), Query Frame = 1
Query: 118 AVLDSWQYKVLDFLFSIPIFNDALFGYYRKKMVKKAEGMGIKWTAFLEDLERNKENLLRAQEQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNSVHGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAIS 636
+V D+ YK+ D + ++P+F+D LFG YR + V+KAE MGI W L++L+ L + Q LTD L IP YY+APIHAYADGNLCWDSA EEDLWSKLMIAPLFN GDV MR++WID ++ + ++D GCGTGLSM+M Q WP AD LGVD+ST+KLAIS
Sbjct: 50 SVTDTLPYKIFDAMMNVPLFHDILFGVYRSQSVEKAEKMGIAWKQTLKELDDADAELKQMQTDLTDPKLTIPDYYYAPIHAYADGNLCWDSAKEEDLWSKLMIAPLFNGRTDGDVKMRQNWIDNVDAVFKENKPRKVMDQGCGTGLSMYMCQQQWPEADFLGVDMSTYKLAIS 222
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: A0A0G4G324_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G324_9ALVE) HSP 1 Score: 167 bits (423), Expect = 2.890e-44 Identity = 89/189 (47.09%), Postives = 117/189 (61.90%), Query Frame = 1
Query: 121 VLDSWQYKVLDFLFSIPIFNDALFGYYRKKMVKKAEGMGIKWTAFLEDLERNKENLLRAQEQLTDTALQIPQYYF-APIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNSVHGDVLMRRDWIDTCLK---------YISGSEVKNIVDLGCGTGLSMFMVQSAWPNA-DLLGVDLSTFKLAISLTKLEK 654
V DS ++ LD+ FS N + G +R + KAE MG+ W + E+ L + + LTD L+IP+YY APIHAY GNLCWDSA+EEDLW+KLMIAPLF S+ GD LMR W+ K + ++ K ++DLGCGTGLS+FM AWP A + LG+DLS FKLA++ KLE+
Sbjct: 176 VTDSLAFRFLDWCFSTWPLNRLIMGQFRSQQADKAEEMGLPWRDEIHRWEQQLHFLEQHRAALTDANLEIPRYYAEAPIHAYEKGNLCWDSAIEEDLWAKLMIAPLFGGSLEGDELMREVWLSETKKIHEQVMQQEWKEEAKAKRVIDLGCGTGLSLFMAARAWPAAPEYLGIDLSPFKLAVTAEKLER 364
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: A0A6H5KG82_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG82_9PHAE) HSP 1 Score: 108 bits (271), Expect = 4.600e-25 Identity = 55/169 (32.54%), Postives = 93/169 (55.03%), Query Frame = 1
Query: 142 KVLDFLFSIPIFNDALFGYYRKKMVKKAEGMGIKWTAFLEDLERNKENLLRAQEQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNSV-----HGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAI 633
K +D LF+ F D + R+K+VK++ +G+ W ++ + RN + L ++L D + P YY+AP H Y +GNL W +A+E + + + A ++ HGD +R ++ + + G E K+I+D+GC TGLS + +P+A + GVDLS LA+
Sbjct: 34 KAIDTLFAFEPFFDYMVEEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYPEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAV 202
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: D7FNV1_ECTSI (Methyltransferase type 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNV1_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.940e-23 Identity = 55/169 (32.54%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 142 KVLDFLFSIPIFNDALFGYYRKKMVKKAEGMGIKWTAFLEDLERNKENLLRAQEQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNSV-----HGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAI 633
K +D LF+ F D + R+K+VK++ +G+ W ++ + RN + L ++L D + P YY+AP H Y +GNL W +A+E + + + A ++ HGD +R ++ + + G E K+I+D+GC TGLS + +P A + GVDLS LA+
Sbjct: 114 KAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYPEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKGPEPKDILDIGCSTGLSTLKLAETFPLARITGVDLSPHMLAV 282
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: A0A1Y0RFL6_9CYAN (SAM-dependent methyltransferase n=1 Tax=Nostocales cyanobacterium HT-58-2 TaxID=1940762 RepID=A0A1Y0RFL6_9CYAN) HSP 1 Score: 102 bits (254), Expect = 2.090e-22 Identity = 54/157 (34.39%), Postives = 96/157 (61.15%), Query Frame = 1
Query: 202 RKKMVKKAEGMGIKWTAFLEDLERNKENLLRAQEQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNS-VHGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAISLTKLEKKSISV 669
R+ M+K+AE +G+ W ++ L+ A+ Q T P+YYF P HAY G+LCW++A+E ++ + + A ++ + GD ++R+ + D K IS +E ++I+DLGCG GLS F +Q +P+A + G+DLS + LA++ + E++ ++
Sbjct: 34 RQMMMKRAEKIGVNWLEEVQTLQARDWQTDLAKVQNPQTT--YPEYYFRPFHAYEKGDLCWEAALEFEVAAHTVHAGIWQGAGAQGDPMLRQSYHDILKKQIS-NEPQDILDLGCGVGLSTFALQKVYPHAKITGLDLSPYFLAVAKYRNEQRHANI 187
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: A0A846FCR4_9CYAN (Class I SAM-dependent methyltransferase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FCR4_9CYAN) HSP 1 Score: 102 bits (254), Expect = 3.210e-22 Identity = 57/152 (37.50%), Postives = 91/152 (59.87%), Query Frame = 1
Query: 202 RKKMVKKAEGMGIKWTAFLEDLE-RNKENLLRAQ-----EQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNS-VHGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAIS 636
R M+++AE +G+ W + L+ R KE L ++ QLT+ L P YY P HAY GNL WD+A E ++ + + A ++ ++ V GD ++R+ + D +I + ++IVDLGCG G+S F +Q+ +P A L GVDLS + LA++
Sbjct: 34 RNMMIERAESIGVNWRQAAKALKSRGKEAELASEWAIELAQLTNPQLTYPDYYLQPFHAYEQGNLSWDAATEVEVAAHAVHARIWPDAGVKGDAMLRQSYHDALQTHIPTAP-RDIVDLGCGVGMSTFTLQALYPQAQLTGVDLSPYFLAVA 184
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: UPI0019825837 (methyltransferase domain-containing protein n=1 Tax=Nostoc sp. UHCC 0702 TaxID=2814655 RepID=UPI0019825837) HSP 1 Score: 101 bits (251), Expect = 5.570e-22 Identity = 51/152 (33.55%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 193 GYYRKKMVKKAEGMGIKWTAFLEDLERNK--ENLLRAQEQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNNS--VHGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAIS 636
G RK+++K+A +G+ W ++ L +K EN Q+ + + P YY H+Y GNLCW+SA+E+++ ++++ F+ + V GD +R+++ D I+ + ++I+DLGCG GLS F +Q A+PNA ++G+D+S + L+++
Sbjct: 25 GLARKRIIKRARSLGVDWHGQVQKLPLSKWKENFT----QIRNPDINYPSYYTKSFHSYERGNLCWESAIEQEIATQMLSYQTFSEAPGVKGDTKLRQNYHDFLKAQITKAP-RDILDLGCGVGLSTFAIQEAYPNAKVIGLDMSPYFLSVA 171
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Match: UPI00034CEF8C (class I SAM-dependent methyltransferase n=1 Tax=Pseudanabaena sp. PCC 6802 TaxID=118173 RepID=UPI00034CEF8C) HSP 1 Score: 99.4 bits (246), Expect = 3.220e-21 Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 1
Query: 202 RKKMVKKAEGMGIKWTAFLEDLERNKENLLRAQEQLTDTALQIPQYYFAPIHAYADGNLCWDSAMEEDLWSKLMIAPLFNN-SVHGDVLMRRDWIDTCLKYISGSEVKNIVDLGCGTGLSMFMVQSAWPNADLLGVDLSTFKLAIS 636
R+ M+ +AEGMG+ W + + AQ Q DT Q P YY HAY GN+ W++A E ++ + + + ++NN S GD ++RR + D I S ++I+D+GC G+S F +Q+ +P A+L G+DLS + LAI+
Sbjct: 33 RQMMIDRAEGMGVPWRKIVAEWRSRDLESELAQVQNPDT--QYPDYYLTSFHAYEKGNMSWEAATEVEVAAYAVHSKIWNNNSPEGDAMLRRSYHDVMTNQIQ-SPPQDILDIGCSVGMSTFALQAVYPQANLTGLDLSPYFLAIA 175 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116037.1262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig116037.1262.1 >prot_H-elongata_contig116037.1262.1 ID=prot_H-elongata_contig116037.1262.1|Name=mRNA_H-elongata_contig116037.1262.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp AASQGRSSTAPSMVLITRNERVTSTNNRVETTIPNVNGAAVLDSWQYKVLback to top mRNA from alignment at H-elongata_contig116037:330..1997+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig116037.1262.1 ID=mRNA_H-elongata_contig116037.1262.1|Name=mRNA_H-elongata_contig116037.1262.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1668bp|location=Sequence derived from alignment at H-elongata_contig116037:330..1997+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig116037:330..1997+ >mRNA_H-elongata_contig116037.1262.1 ID=mRNA_H-elongata_contig116037.1262.1|Name=mRNA_H-elongata_contig116037.1262.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1380bp|location=Sequence derived from alignment at H-elongata_contig116037:330..1997+ (Himanthalia elongata Himel1 dioecious)back to top |