mRNA_H-elongata_contig11569.1240.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11569.1240.1
Unique NamemRNA_H-elongata_contig11569.1240.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 4.170e-57
Identity = 103/163 (63.19%), Postives = 125/163 (76.69%), Query Frame = 2 
Query:  383 NMTLYRGKGEVAVIKSASGGVGSRGSEKRVKAKR-EPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFL-KGNCDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHVEYDRKRRREADS--GDHQSDDE 859
            NMTLYRGKG+VAV+ +      +  ++++   K  EPCLFF ++GKCS+SD+ C Y HD+ KVAVCRAFL KG CD GD+CLLTHAVQ EKMP C++FE+GMCFTPNCPY HVKVS+NAAVCP FLKG+CPDG ACRLKH   D ++R + DS  GDH   DE
Sbjct:  749 NMTLYRGKGQVAVVGTGKEAASAAAAKRKSNNKTGEPCLFFCRFGKCSRSDEECRYVHDRAKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGHCPDGTACRLKHELPDPRKRAKDDSAGGDHGDGDE 911
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 1.360e-56
Identity = 105/158 (66.46%), Postives = 122/158 (77.22%), Query Frame = 2 
Query:  383 NMTLYRGKGEVAVI----KSASGGVGSRGSEKRVKAKREPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFL-KGNCDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHVEYD-RKRRREADSG 838
            NMTLYRGKG+VAV+    ++AS       S K+ K   EPCLFF ++GKCSKSD+ C Y HD+ KVAVCRAFL KG CD G++CLLTHAVQ EKMP C++FE+GMCFTPNCPY HVKVS+NAAVCP FLKGYCPDG ACRLKH   D RKR R+  +G
Sbjct:  732 NMTLYRGKGQVAVVGTGKEAASXXXXXXXSNKKTKT-AEPCLFFCRFGKCSKSDEECRYVHDRAKVAVCRAFLRKGGCDKGNKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGYCPDGTACRLKHELPDPRKRARDVTTG 888
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A553NNT2_TIGCA (Uncharacterized protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NNT2_TIGCA)

HSP 1 Score: 140 bits (352), Expect = 2.710e-32
Identity = 62/109 (56.88%), Postives = 77/109 (70.64%), Query Frame = 2 
Query:  491 CLFFSKYGKCSK-SDDSCPYAHDKTKVAVCRAFLKGNCDDG-DECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHVEYDR 811
            C+FF+K+G+C K +   CPY HD  KVAVCR FL+G+C    DECLLTH V  +KMPAC FF+ G C   +CPY HVKVS +AA+CP F +GYCP G AC L+H   D+
Sbjct:  306 CMFFNKFGRCQKRAQGLCPYLHDPAKVAVCRRFLQGSCPKAADECLLTHKVSPDKMPACKFFQLGQCGRDHCPYNHVKVSADAALCPAFRQGYCPQGQACTLRHAMSDQ 414
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A485LIR1_9STRA (Aste57867_21895 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIR1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.380e-30
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 2 
Query:  485 EPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKH 796
            E C+F++K G+C K + +C + HD  K+A+CR FL+G C DG +C L+H +   KMP C  F +GMC    C YRHV VSR+AA+C  F KGYCPDG  CRLKH
Sbjct:  205 EYCMFYNKLGECKKKN-ACLFVHDSRKIAICRKFLRGACHDGAKCKLSHQLDENKMPDCAMFLKGMCTRDGCHYRHVNVSRDAAICEAFHKGYCPDGATCRLKH 307
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A8J4PM82_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PM82_9MYCE)

HSP 1 Score: 125 bits (313), Expect = 4.530e-27
Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  479 KREPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCDDGDECLLTHAV-QTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHV 799
            K++ CL+++++GKC+ S D C Y HDK+K+  C  FL G C D  EC L H +   E+MP C  + +GMC   NCPY HV VS+NA +CP+F KGYCP+G AC +KH 
Sbjct:  344 KKQYCLYYNRFGKCN-SGDKCKYIHDKSKIRTCPKFLSGTCQDS-ECHLKHEITDLEQMPICYLYLKGMCTKVNCPYLHVFVSKNAKLCPDFQKGYCPNGSACTMKHT 449
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A024TB83_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TB83_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.650e-21
Identity = 50/106 (47.17%), Postives = 63/106 (59.43%), Query Frame = 2 
Query:  485 EPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCD-DGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNF-LKGYCPDGVACRLKH 796
            E CLF+ K+G+C    D C + HD    ++CR FL+  C  D   C L+H     KMP C  F +G+C    C YRHV VSR+AA+C  F L+GYC DG ACR KH
Sbjct:  202 ELCLFYIKHGECKHKHD-CLFVHDSRTKSICRPFLRDACPHDASTCKLSHCPDQHKMPDCAMFLKGLCSREGCHYRHVNVSRDAALCDAFSLRGYCADGPACRRKH 306
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: UPI001F047A1D (uncharacterized protein LOC124436211 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F047A1D)

HSP 1 Score: 103 bits (258), Expect = 1.170e-19
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 2 
Query:  467 RVKAKREPCLFFSKYGKCSK-SDDSCPYAHDKTKVAVCRAFLKGNCDDGD-ECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHV 799
            +VK  +E C+F++KYGKC+K S   CPY HD +K+AVC  FL+G C   D  CL +H +  +                +CPY HV V   A VC +FLKG+C  G+ C+ KHV
Sbjct:  663 KVKRGKEYCMFYNKYGKCTKHSQGICPYIHDPSKIAVCTRFLQGKCQKTDGSCLFSHKIDKDXXXXXXXXXXXXXXRDDCPYLHVNVGSQALVCEDFLKGFCRLGLKCKKKHV 775
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A372QVK4_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372QVK4_9GLOM)

HSP 1 Score: 100 bits (248), Expect = 1.510e-19
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 2 
Query:  467 RVKAKREPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGN-CDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKG-YCPDGVACRLKH 796
            + K   + C ++ KYG+C K  D C Y HD  +V VC+ +LKG+ C   ++C L H      +P C  F +GMC   +C Y HVKVS+ A +C +F+ G YCP G+ CR KH
Sbjct:  155 KTKLVNKYCTYYHKYGRC-KEGDYCAYKHDPNRVEVCKLWLKGSECTLSNKCPLQHVESAHLIPYCRHFCKGMCLKDDCHYTHVKVSKRAPLCKDFMVGRYCPAGMNCRKKH 265
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A7SQV2_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SQV2_NEMVE)

HSP 1 Score: 95.5 bits (236), Expect = 1.600e-19
Identity = 47/120 (39.17%), Postives = 62/120 (51.67%), Query Frame = 2 
Query:  491 CLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCDDGD-ECLLTHAVQTEK-----------------MPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKH 796
            C+++S++GKC+K D  C Y HD +KVAVC  FLKG C + D  C  +H +  EK                 M              +CPY HV VS  AA+C +F+KGYCP G  C+ KH
Sbjct:   11 CMYYSRFGKCNKGD-KCKYIHDPSKVAVCTKFLKGKCKNTDGTCTFSHRIDKEKVYNYIPGKNKKGSIPENMXXXXXXXXXXXXXDDCPYSHVNVSNKAAICEDFVKGYCPLGQQCKKKH 129
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BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A2N1P439_9GLOM (Uncharacterized protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N1P439_9GLOM)

HSP 1 Score: 100 bits (248), Expect = 2.040e-19
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 2 
Query:  467 RVKAKREPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGN-CDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKG-YCPDGVACRLKH 796
            + K   + C ++ KYG+C K  D C Y HD  +V VC+ +LKG+ C   ++C L H      +P C  F +GMC   +C Y HVKVS+ A +C +F+ G YCP G+ CR KH
Sbjct:  175 KTKLVNKYCTYYHKYGRC-KEGDYCAYKHDPNRVEVCKLWLKGSECTLSNKCPLQHVESAHLIPYCRHFCKGMCLKDDCHYTHVKVSKRAPLCKDFMVGRYCPAGMNCRKKH 285
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC32_9PHAE4.170e-5763.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB82_ECTSI1.360e-5666.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A553NNT2_TIGCA2.710e-3256.88Uncharacterized protein (Fragment) n=1 Tax=Tigriop... [more]
A0A485LIR1_9STRA3.380e-3052.88Aste57867_21895 protein n=1 Tax=Aphanomyces stella... [more]
A0A8J4PM82_9MYCE4.530e-2750.00Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A024TB83_9STRA2.650e-2147.17Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
UPI001F047A1D1.170e-1942.48uncharacterized protein LOC124436211 n=1 Tax=Xenia... [more]
A0A372QVK4_9GLOM1.510e-1941.96Uncharacterized protein n=1 Tax=Rhizophagus sp. MU... [more]
A7SQV2_NEMVE1.600e-1939.17Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
A0A2N1P439_9GLOM2.040e-1941.96Uncharacterized protein n=2 Tax=Rhizophagus irregu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11569contigH-elongata_contig11569:93..2543 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score214.2
Seed ortholog evalue8.4e-53
Seed eggNOG ortholog2880.D8LB82
Preferred nameZC3H3
KEGG koko:K06093
KEGG Pathwayko04015,ko04144,ko04360,ko04390,ko04391,ko04530,ko05165,map04015,map04144,map04360,map04390,map04391,map04530,map05165
GOsGO:0000981,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005847,GO:0005849,GO:0006139,GO:0006355,GO:0006357,GO:0006378,GO:0006379,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010646,GO:0010647,GO:0010793,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0016973,GO:0019219,GO:0019222,GO:0023051,GO:0023056,GO:0031123,GO:0031124,GO:0031323,GO:0031326,GO:0031503,GO:0031974,GO:0031981,GO:0032239,GO:0032386,GO:0032879,GO:0032880,GO:0032925,GO:0032927,GO:0032991,GO:0033036,GO:0033157,GO:0034613,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0046332,GO:0046483,GO:0046822,GO:0046825,GO:0046831,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051049,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051252,GO:0051641,GO:0051649,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070201,GO:0070412,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0090087,GO:0090092,GO:0090100,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0098787,GO:0098789,GO:0140098,GO:0140110,GO:1901360,GO:1901363,GO:1903506,GO:1903827,GO:2000112,GO:2000197,GO:2001141
EggNOG free text desc.zinc finger
EggNOG OGsCOG5084@1,KOG1492@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-27_004850.1
Exons3
Model size1581
Cds size876
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11569.1240.1prot_H-elongata_contig11569.1240.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11569 746..2491 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929670.8447595-UTR-H-elongata_contig11569:92..7451622929670.8447595-UTR-H-elongata_contig11569:92..745Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11569 93..745 -
1691679113.5770123-UTR-H-elongata_contig11569:92..7451691679113.5770123-UTR-H-elongata_contig11569:92..745Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11569 93..745 -
1622929670.9292223-UTR-H-elongata_contig11569:2491..25431622929670.9292223-UTR-H-elongata_contig11569:2491..2543Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11569 2492..2543 -
1691679113.6194417-UTR-H-elongata_contig11569:2491..25431691679113.6194417-UTR-H-elongata_contig11569:2491..2543Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11569 2492..2543 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929670.8647158-CDS-H-elongata_contig11569:745..8231622929670.8647158-CDS-H-elongata_contig11569:745..823Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11569 746..823 -
1691679113.5882428-CDS-H-elongata_contig11569:745..8231691679113.5882428-CDS-H-elongata_contig11569:745..823Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11569 746..823 -
1622929670.8979902-CDS-H-elongata_contig11569:1148..12411622929670.8979902-CDS-H-elongata_contig11569:1148..1241Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11569 1149..1241 -
1691679113.602658-CDS-H-elongata_contig11569:1148..12411691679113.602658-CDS-H-elongata_contig11569:1148..1241Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11569 1149..1241 -
1622929670.913371-CDS-H-elongata_contig11569:1786..24911622929670.913371-CDS-H-elongata_contig11569:1786..2491Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11569 1787..2491 -
1691679113.6118467-CDS-H-elongata_contig11569:1786..24911691679113.6118467-CDS-H-elongata_contig11569:1786..2491Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11569 1787..2491 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11569.1240.1

>prot_H-elongata_contig11569.1240.1 ID=prot_H-elongata_contig11569.1240.1|Name=mRNA_H-elongata_contig11569.1240.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
MTIWRVGSSNPATSRVGAAIPANTLDAAASFLAAEASRQREKKPPPPSTK
NGFLVAPRVSKPSPSATSTSSLPIKTIALLSKSRARTVASSRAAAVVAVA
RAKNTRVRVRNMTLYRGKGEVAVIKSASGGVGSRGSEKRVKAKREPCLFF
SKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCDDGDECLLTHAVQTEKM
PACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHVE
YDRKRRREADSGDHQSDDEAANAESRKADEARSKTTGRGTH*
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mRNA from alignment at H-elongata_contig11569:93..2543-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11569.1240.1 ID=mRNA_H-elongata_contig11569.1240.1|Name=mRNA_H-elongata_contig11569.1240.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2451bp|location=Sequence derived from alignment at H-elongata_contig11569:93..2543- (Himanthalia elongata Himel1 dioecious)
GAAATCAAAAAATGAAACACCAACCAATTTCGTGCGCAGCGGTAAGCACG
GGATGACAATCTGGCGGGTCGGCAGCTCGAATCCTGCCACGAGCAGGGTG
GGCGCGGCAATTCCAGCAAATACTCTCGATGCGGCCGCCTCGTTTTTAGC
TGCTGAAGCCTCCCGACAGAGGGAGAAGAAGCCACCACCCCCCTCGACCA
AAAATGGTTTTCTCGTGGCGCCAAGAGTGAGCAAGCCATCGCCTTCGGCT
ACTTCGACCTCGAGCTTGCCAATCAAGACGATCGCATTGTTGAGCAAGTC
TCGTGCGCGCACCGTGGCTTCATCGAGAGCGGCGGCAGTGGTGGCGGTCG
CGCGAGCCAAGAACACGCGAGTGCGGGTGCGTAACATGACGTTGTATCGC
GGAAAAGGCGAAGTGGCGGTAATCAAATCGGCCTCAGGCGGGGTGGGGAG
CCGCGGGAGCGAGAAGAGGGTGAAAGCGAAGAGGGAGCCGTGCCTCTTCT
TTAGCAAGTACGGGAAGTGCTCCAAGTCTGACGACTCGTGTCCCTATGCG
CACGATAAGACGAAGGTTGCAGTCTGCCGAGCATTTCTGAAGGGCAATTG
CGACGACGGGGATGAGTGCCTCCTCACGCACGCCGTTCAGACAGAGAAGA
TGCCTGCGTGTGTTTTTTTCGAGAGAGGCATGTGCTTCACCCCCAACTGT
CCCTACAGGCACGTCAAGGTCAGCCGGAACGCAGCCGTCTGCCCCAACTT
CTTAAAGGTGCGCATGGCGCATGCTTGATTTATTACCAGGAGGGATAAGG
AGTATATATCTGACCCAAACAAAGTTTTTCTGGTGTACGCAGATAAACCC
CTATGGAACTCGATCTGTTTTTTTGTATACTAAATTCAAAATAAAAATTG
AAATCTAGTTCCGGAAGGGTTAAATGTACGCTTTCAGGTTATATATATTT
ATTTATCGTCCTGATCAGTGCTGGTGGTCCCTTACTACCCTCAGAAGTGC
TGTGGCTCAAATTGGTTTCTCCATATCCCCAAATCAGTTTTAGACAGACG
GAATTTAGACCGGGGTTTCAATGCAGATTGGCCGTCACCAGCGGCACACC
CCGCGTCCACAAGGTTCTCTTTCCCCCGTACCTGCGGCTTCCCCAGAGGT
AAAGCCGTTCTGAGGCATGCAGAGTGTGACCAAGCCGACGGTCGTTTCTT
AAACTTTGAGCCACCTTGGATTCTTTTCATGACCATTAATTCCCCCCACC
CCCGCGCGCGCTTTGTACTTTGAAAAAAAATGCATTCGTGGCAACACGGC
AGGGTTACTGTCCGGATGGAGTTGCGTGCAGGCTAAAGCACGTAGAATAT
GACCGAAAGAGAAGGAGAGAAGCCGACAGCGGCGACCATCAGAGCGTGAG
CACTTTTTTCGCAGTTATCCCGAGTGTCGTCCTCCCATTGTGTTTTTTCG
TTGTTTTTTTCGTTATCCTCCCCTATGTGATTTGTTCCCGCCTCGCCTGA
CGGTGCGCTTGTACCCTGCGCGTTTTTTTCTGTGGCGGTTGATGCAACTT
GTAGAACTTTCCCGCGAGAAGCAGCACCGGTGCTCCTTCTCTCTAAGGCC
CCTCCTTCTTAACAATGCATACATCTATCGTACGTGCCGGCGGTCCTTTG
TTTCTTTTCGATTATGAGTCTTCCCCCCCCCCCCACCTCCTCTCGCCATC
GCGTGCGTCGGTCGTAAAAGGACGATGAGGCTGCCAACGCGGAAAGCAGG
AAGGCGGACGAAGCGAGGAGTAAAACTACAGGTCGGGGCACGCATTGAAG
CGCTCGAGACGATGGACAACAGAGCGCGGGAAAAGAGCCTTTTTAAAAAT
CGTTTCACCGACATTCGTTACAACCTAAAAAAAGTGACGGCCGACGAAGT
CGAGAGATCGTTCACCATTTTTTGTGTTGCGGGATTTCACTTGTGCATTA
ACACGGCATTTCGAGGGGGGGGAAGAGGAGAACCTGTTTTCTAACGCGCG
ATATACTACGTCAGTAATTGCGCTTCTTGTATGATCCTTATCTCAATTGT
TTTCGTTGCCCGGCCTCGCAGGTAAAATAAATGAAATGACTAGGGGGACC
ACGAAGTTATGCGACACGATCTCGCCAAGCCTTTCCAGCTCGTGATTTGG
TTTTTACATCACGTTCGTCGCAACCCAGCCGCCCCACGAGAACGACTTGA
ATCCATTTGCCGGAATTGGCTTTTGTCGGAACTGTACCATTGCACGCAGT
CTCATTATCATGTCGCCGTCGCGCCCCCTCCCCTCCTCTGCCCGCGTGCC
CTGATTCGTACCGCCCTCTATACCCCCTTTTTCTCCGCCGACTACTTAAC
GCGGGATTTTTTCACCCTTACAATGGTGGTTGATCCGAATCTCGTTGCGG
TTGTCAACCTCGCTACGGAATCTGCGACCCGACTGTGGCGCGCGCGCGGG
G
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Coding sequence (CDS) from alignment at H-elongata_contig11569:93..2543-

>mRNA_H-elongata_contig11569.1240.1 ID=mRNA_H-elongata_contig11569.1240.1|Name=mRNA_H-elongata_contig11569.1240.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1752bp|location=Sequence derived from alignment at H-elongata_contig11569:93..2543- (Himanthalia elongata Himel1 dioecious)
ATGACAATCTGGCGGGTCGGCAGCTCGAATCCTGCCACGAGCAGGGTGGG
CGCGGCAATTCCAGCAAATACTCTCGATGCGGCCGCCTCGTTTTTAGCTG
CTGAAGCCTCCCGACAGAGGGAGAAGAAGCCACCACCCCCCTCGACCAAA
AATGGTTTTCTCGTGGCGCCAAGAGTGAGCAAGCCATCGCCTTCGGCTAC
TTCGACCTCGAGCTTGCCAATCAAGACGATCGCATTGTTGAGCAAGTCTC
GTGCGCGCACCGTGGCTTCATCGAGAGCGGCGGCAGTGGTGGCGGTCGCG
CGAGCCAAGAACACGCGAGTGCGGGTGCGTAACATGACGTTGTATCGCGG
AAAAGGCGAAGTGGCGGTAATCAAATCGGCCTCAGGCGGGGTGGGGAGCC
GCGGGAGCGAGAAGAGGGTGAAAGCGAAGAGGGAGCCGTGCCTCTTCTTT
AGCAAGTACGGGAAGTGCTCCAAGTCTGACGACTCGTGTCCCTATGCGCA
CGATAAGACGAAGGTTGCAGTCTGCCGAGCATTTCTGAAGGGCAATTGCG
ACGACGGGGATGAGTGCCTCCTCACGCACGCCGTTCAGACAGAGAAGATG
CCTGCGTGTGTTTTTTTCGAGAGAGGCATGTGCTTCACCCCCAACTGTCC
CTACAGGCACGTCAAGGTCAGCCGGAACGCAGCCGTCTGCCCCAACTTCT
TAAAGATGACAATCTGGCGGGTCGGCAGCTCGAATCCTGCCACGAGCAGG
GTGGGCGCGGCAATTCCAGCAAATACTCTCGATGCGGCCGCCTCGTTTTT
AGCTGCTGAAGCCTCCCGACAGAGGGAGAAGAAGCCACCACCCCCCTCGA
CCAAAAATGGTTTTCTCGTGGCGCCAAGAGTGAGCAAGCCATCGCCTTCG
GCTACTTCGACCTCGAGCTTGCCAATCAAGACGATCGCATTGTTGAGCAA
GTCTCGTGCGCGCACCGTGGCTTCATCGAGAGCGGCGGCAGTGGTGGCGG
TCGCGCGAGCCAAGAACACGCGAGTGCGGGTGCGTAACATGACGTTGTAT
CGCGGAAAAGGCGAAGTGGCGGTAATCAAATCGGCCTCAGGCGGGGTGGG
GAGCCGCGGGAGCGAGAAGAGGGTGAAAGCGAAGAGGGAGCCGTGCCTCT
TCTTTAGCAAGTACGGGAAGTGCTCCAAGTCTGACGACTCGTGTCCCTAT
GCGCACGATAAGACGAAGGTTGCAGTCTGCCGAGCATTTCTGAAGGGCAA
TTGCGACGACGGGGATGAGTGCCTCCTCACGCACGCCGTTCAGACAGAGA
AGATGCCTGCGTGTGTTTTTTTCGAGAGAGGCATGTGCTTCACCCCCAAC
TGTCCCTACAGGCACGTCAAGGTCAGCCGGAACGCAGCCGTCTGCCCCAA
CTTCTTAAAGGGTTACTGTCCGGATGGAGTTGCGTGCAGGCTAAAGCACG
TAGAATATGACCGAAAGAGAAGGAGAGAAGCCGACAGCGGCGACCATCAG
AGCGGTTACTGTCCGGATGGAGTTGCGTGCAGGCTAAAGCACGTAGAATA
TGACCGAAAGAGAAGGAGAGAAGCCGACAGCGGCGACCATCAGAGCGACG
ATGAGGCTGCCAACGCGGAAAGCAGGAAGGCGGACGAAGCGAGGAGTAAA
ACTACAGGTCGGGGCACGCATTGAGACGATGAGGCTGCCAACGCGGAAAG
CAGGAAGGCGGACGAAGCGAGGAGTAAAACTACAGGTCGGGGCACGCATT
GA
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