mRNA_H-elongata_contig115645.1237.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: A0A6H5L3G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G2_9PHAE) HSP 1 Score: 273 bits (699), Expect = 2.480e-83 Identity = 151/226 (66.81%), Postives = 167/226 (73.89%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIVHHEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVSQR 678
GKSTLLRALA+GVYDKVPGDGRE +V DPGAVT+RAEDGRPVS VDISPFISSLP+ P + + V E + +TE FST AASGSTSQAANV+EA+EAGATALLLDEDTCAGNFM RDSRMRA+V HEPI PFIYRV SLWL+LG+SSVIVVGGCGDYFDVHDTALLVDNY+VSDATERAHS+S+R
Sbjct: 329 GKSTLLRALAMGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSSVDISPFISSLPSAVAVPPVRAAPAGGVAXXXXXXXXXXXXXXXXVGDAEGGTVETNXXXXXXXXXEGVTTERFSTGAASGSTSQAANVMEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNYVVSDATERAHSISRR 554
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: A0A7S2AK97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AK97_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.800e-56 Identity = 112/225 (49.78%), Postives = 137/225 (60.89%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIVHHEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVSQ 675
GKSTLLRALA GVY+KVPGDGREF VTD A+TVRAEDGR V VD+SPFI+SLP+ K+ +P+ FST ASGSTSQAA V+EAVE GA L++DEDT A NFM+RD RMRA+V HEPI P +YRV LW LG+SS++V+GG GD+ DV D +L+D+Y SDAT +A +S+
Sbjct: 104 GKSTLLRALAAGVYNKVPGDGREFVVTDASAMTVRAEDGRVVRSVDVSPFITSLPS-----------------KSNLDPSN-----------------------------------FSTTCASGSTSQAAAVIEAVELGAKTLIIDEDTSAANFMSRDGRMRALVTHEPITPLLYRVTGLWESLGVSSIVVIGGNGDWLDVADCVVLLDDYKASDATRQAAFISK 276
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: A0A7S2P8T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P8T6_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.770e-54 Identity = 106/227 (46.70%), Postives = 139/227 (61.23%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLP---NTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIVHHEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVS 672
GKSTLLRA+A G++DKVPGDGREF VT AV+VRAEDGR +SG +IS FIS+LP + P + + G + P+ A + T +F T ASGSTSQA+NVVEA+E+GA+ +L+DED A NFM RD R RA+V E I P +YRV ++ L IS+++VVGG GD+ DV D LL+D Y++SDAT +A S+S
Sbjct: 36 GKSTLLRAIATGIHDKVPGDGREFCVTVSDAVSVRAEDGRSISGCNISAFISNLPLLNGISSGPPSDGENFQLNGSVILKKPDEAPDEV---------------------------TRYFKTREASGSTSQASNVVEAIESGASCMLIDEDVSAANFMARDGRTRALVMDESITPLLYRVNGMYDSLKISTIVVVGGVGDWLDVPDQVLLLDRYVISDATTKARSIS 235
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: A0A7S1G0T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G0T6_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.480e-50 Identity = 104/225 (46.22%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIVHHEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVSQ 675
GKSTLLRALA GV+D+ PGDGRE+ V P AV+VRAEDGRPVSG+DISPF+S LP V +T FST ASGSTSQAA V+EA+EAG LL+DED A NFM+RD RMRA++ E I P +YRV L+ +LG+S+V+VVG GD+ DV L D Y+ D T++A SVS+
Sbjct: 5 GKSTLLRALAGGVHDRPPGDGREYCVAVPSAVSVRAEDGRPVSGLDISPFLSRLPGPGV-----------------------------------------------------NTARFSTREASGSTSQAAAVMEALEAGTECLLVDEDVSAANFMSRDGRMRALIQDESITPLLYRVNGLYDELGVSTVVVVGSVGDWLDVPHRVLCTDRYVAVDLTQKARSVSE 176
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: U6M9W9_EIMMA (Uncharacterized protein n=1 Tax=Eimeria maxima TaxID=5804 RepID=U6M9W9_EIMMA) HSP 1 Score: 179 bits (453), Expect = 2.720e-50 Identity = 105/226 (46.46%), Postives = 136/226 (60.18%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIV--HHEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVS 672
GKST+L AL VGVY+K+PGDGREF +T+P AV +RAEDGR V+ VDISPFIS+LP ST FS++ ASGSTSQAAN++EA+E GATALL+DEDTCA NFM RD+RM+A+V EPI PF++RV+ L+ +LGIS+V+V+GG GD+F+V D L D Y + T+RA ++
Sbjct: 177 GKSTMLEALQVGVYNKIPGDGREFVITEPNAVKIRAEDGRVVTSVDISPFISNLPF------------------------------------------------------GKSTSSFSSQDASGSTSQAANIMEALEFGATALLIDEDTCATNFMIRDARMQALVAKEKEPITPFLFRVKRLYTELGISTVMVIGGSGDFFEVADIVLQFDKYEAFNVTKRAKEIA 348
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: A0A3M1AHD7_9BACT (ATPase (Fragment) n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1AHD7_9BACT) HSP 1 Score: 175 bits (444), Expect = 4.170e-50 Identity = 108/227 (47.58%), Postives = 134/227 (59.03%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIVHH--EPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVSQ 675
GKSTLL+AL GVY +PGDGRE+ VT P AV +RAEDGR V VDISPFI++LP QN T+ F T+ ASGSTSQAAN++EA+EAGA LL+DEDT A NFM RD+RM+A+VH EPI PF+ RVR L+ LG+S+++V+GGCGDY DV DT +++ NYL D TE A V+Q
Sbjct: 23 GKSTLLKALERGVYPHIPGDGREYVVTLPDAVKIRAEDGRRVEQVDISPFITNLP-------------------FGQN-----------------------------------TKSFCTDDASGSTSQAANIMEALEAGARLLLVDEDTSATNFMVRDARMQALVHKQFEPITPFLDRVRQLYESLGVSTILVMGGCGDYLDVADTVIMMRNYLPVDITEEARKVAQ 195
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: A0A2T2W0Q9_9CYAN (ATPase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T2W0Q9_9CYAN) HSP 1 Score: 180 bits (457), Expect = 5.260e-50 Identity = 106/226 (46.90%), Postives = 135/226 (59.73%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIV--HHEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVS 672
GKSTLLRA+ GVY+ +PGDGR VTDPGAV VRAEDGR ++GVDISPFI SLP + ST+ FST ASGSTSQAAN++E +EAGATALL+DEDT A NFM RD RM+A++ EPI PFI +V+ L+ GIS+V+V+GG GDYFDV DT + +D+++ D TE+A +++
Sbjct: 259 GKSTLLRAIEAGVYNHMPGDGRHQVVTDPGAVKVRAEDGRSIAGVDISPFIGSLP------------------------------------------------------QGKSTQQFSTPNASGSTSQAANIIEVIEAGATALLVDEDTSATNFMIRDRRMQALIAKDREPITPFIDKVQQLYTDYGISTVLVMGGSGDYFDVADTVIAMDDFVPQDVTEQARAIA 430
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: A0A1Z5JZJ3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZJ3_FISSO) HSP 1 Score: 181 bits (460), Expect = 9.210e-50 Identity = 109/226 (48.23%), Postives = 134/226 (59.29%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIVHHEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVSQR 678
GKSTLLR +A GVY+K+PGDGREFSVT A+TVRAEDGR V+ +IS FIS+LP P M+ + +DT FST ASGSTSQAANVVEA+E G +ALL+DED A NFM RD RMR++V E I P +YRV L+ GISS++VVGG GD+ DV D +L+D Y DATE+A SVS++
Sbjct: 291 GKSTLLRTIACGVYNKIPGDGREFSVTVTDAMTVRAEDGRYVNNCNISAFISNLPTL---PGMSEV-------------------VDTTR--------------------------FSTNEASGSTSQAANVVEAIEMGCSALLVDEDVSAANFMARDGRMRSLVMDESITPLLYRVNGLYASRGISSIVVVGGVGDWLDVPDAVILMDKYTCRDATEKARSVSRQ 468
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: A0A7C1AWI9_9BACT (ATPase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C1AWI9_9BACT) HSP 1 Score: 179 bits (455), Expect = 1.420e-49 Identity = 111/226 (49.12%), Postives = 134/226 (59.29%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIVH--HEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVS 672
GKSTLL ALA+GVY VP DGRE+ VT P AV +RAEDGR + VDIS FIS LP GRR T++FST+ ASGSTSQAAN+VEA+EAG+ LLLDEDT A NFM RD+RM+A+VH HEPI PFI RVR L+ +LG+S+V+V+GGCGDYFDV DT L++ Y + T A V+
Sbjct: 271 GKSTLLDALALGVYPHVPDDGREYVVTRPDAVKIRAEDGRRIEKVDISGFISLLPG---------------------------------------------------GRR---TDFFSTDDASGSTSQAANIVEALEAGSRLLLLDEDTSATNFMVRDARMQALVHKDHEPITPFIDRVRELYSELGVSTVLVMGGCGDYFDVADTVLMMREYRAVEVTSEARRVA 442
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Match: UPI0002F3E1B6 (ABC-ATPase domain-containing protein n=1 Tax=Nodosilinea nodulosa TaxID=416001 RepID=UPI0002F3E1B6) HSP 1 Score: 179 bits (454), Expect = 1.430e-49 Identity = 108/226 (47.79%), Postives = 133/226 (58.85%), Query Frame = 1
Query: 1 GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFISSLPNTAVAPAMTSIDDRCGGDKAKQNPNRAKGAIDTVHGDHQQRKEASNVMGNGCGRRASSTEWFSTEAASGSTSQAANVVEAVEAGATALLLDEDTCAGNFMTRDSRMRAIV--HHEPIIPFIYRVRSLWLQLGISSVIVVGGCGDYFDVHDTALLVDNYLVSDATERAHSVS 672
GKSTLLRA+ GVY+ VP DGR VTDP AV VRAEDGR ++GV+ISPFI SLP + ST+ FST ASGSTSQAAN++EA+EAGATALL+DEDT A NFM RD RM+A++ EPI PFI +VR L+ GIS+V+V+GG GDYFDV DT + +D ++ D TERA S++
Sbjct: 259 GKSTLLRAIEAGVYNHVPDDGRHQVVTDPAAVKVRAEDGRSIAGVNISPFIGSLP------------------------------------------------------QGKSTQAFSTPNASGSTSQAANIIEAIEAGATALLVDEDTSATNFMIRDRRMQALIAKDREPITPFIDKVRQLYTDYGISTVLVMGGSGDYFDVADTVVAMDEFVPQDVTERARSIA 430 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115645.1237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig115645.1237.1 >prot_H-elongata_contig115645.1237.1 ID=prot_H-elongata_contig115645.1237.1|Name=mRNA_H-elongata_contig115645.1237.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp GKSTLLRALAVGVYDKVPGDGREFSVTDPGAVTVRAEDGRPVSGVDISPFback to top mRNA from alignment at H-elongata_contig115645:220..1971- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig115645.1237.1 ID=mRNA_H-elongata_contig115645.1237.1|Name=mRNA_H-elongata_contig115645.1237.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1752bp|location=Sequence derived from alignment at H-elongata_contig115645:220..1971- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig115645:220..1971- >mRNA_H-elongata_contig115645.1237.1 ID=mRNA_H-elongata_contig115645.1237.1|Name=mRNA_H-elongata_contig115645.1237.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1356bp|location=Sequence derived from alignment at H-elongata_contig115645:220..1971- (Himanthalia elongata Himel1 dioecious)back to top |