mRNA_H-elongata_contig11533.1217.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11533.1217.1
Unique NamemRNA_H-elongata_contig11533.1217.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: A0A0B7BG64_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7BG64_9EUPU)

HSP 1 Score: 111 bits (277), Expect = 2.080e-28
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 1
Query:    1 VATGYCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            V+TGYC +T TGH +WVR V +  DG ++ASC NDQ+V+VW V    +C  +LREH HVVE +++AP+SAQ  +  A                   F+ SGSRDKT+K+W+ +VG CL T
Sbjct:    1 VSTGYCVKTYTGHREWVRMVKVYQDGSLLASCSNDQTVRVW-VTATKECKAELREHEHVVECISWAPDSAQPAINEAAGAESKSAKRSGP------FLLSGSRDKTLKMWDVSVGLCLFT 113          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: A0A8M1KI82_CLUHA (lissencephaly-1 homolog B-like n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KI82_CLUHA)

HSP 1 Score: 111 bits (277), Expect = 3.290e-28
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 1
Query:    1 VATGYCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            +A+ YC +T TGH +WVR V  + DG ++ASC NDQ+V+VW V    +C  +LREH HVVE +++APESA  T+  AT                  F+ SGSRDKT+K+W+ + G CLMT
Sbjct:   19 LASSYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV-ATKECKAELREHEHVVECISWAPESAHPTILEATGSENKKSGKPGP------FLLSGSRDKTIKMWDVSTGMCLMT 131          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: A0A673IB16_9TELE (Lissencephaly-1 homolog B-like n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673IB16_9TELE)

HSP 1 Score: 110 bits (276), Expect = 1.200e-26
Identity = 54/116 (46.55%), Postives = 73/116 (62.93%), Query Frame = 1
Query:   13 YCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            YC +T TGH +WVR V  + DG ++ASC NDQ+V+VW V    +C  +LREH HVVE +++APESA  T++ AT                  F+ SGSRDKT+K+W+ + G CLMT
Sbjct:  191 YCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVV-ANKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGP------FLLSGSRDKTIKMWDISTGMCLMT 299          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: A0A6I9YCL1_9SAUR (platelet-activating factor acetylhydrolase IB subunit alpha n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9YCL1_9SAUR)

HSP 1 Score: 107 bits (268), Expect = 1.190e-25
Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query:   13 YCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            YC +T TGH +WVR V  + DG ++ASC NDQ+V+VW V    +C  +LREH HVVE +++APES+  T+  AT                  F+ SGSRDKT+K+W+ + G CLMT
Sbjct:  164 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV-ATKECKAELREHEHVVECISWAPESSYSTILEATGSETKKSGKPGP------FLLSGSRDKTIKMWDISTGMCLMT 272          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: A0A6P3Q4Z2_PTEVA (Platelet-activating factor acetylhydrolase IB subunit alpha n=6 Tax=Amniota TaxID=32524 RepID=A0A6P3Q4Z2_PTEVA)

HSP 1 Score: 108 bits (270), Expect = 1.220e-25
Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    7 TGYCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            T YC +T TGH +WVR V  + DG ++ASC NDQ+V+VW V    +C  +LREH HVVE +++APES+  +++ AT                  F+ SGSRDKT+K+W+ + G CLMT
Sbjct:  215 TDYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV-ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP------FLLSGSRDKTIKMWDVSTGMCLMT 325          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: A0A8C7QR40_ONCMY (LisH domain-containing protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7QR40_ONCMY)

HSP 1 Score: 108 bits (269), Expect = 1.710e-25
Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query:   13 YCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            YC +T TGH +WVR V  + DG ++ASC NDQ+V+VW V    +C  +LREH HVVE +A+AP++A  T+  AT                  F+ SGSRDKT+K+W+ + G CLMT
Sbjct:  218 YCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVW-VATSKECKAELREHEHVVECIAWAPDTAHPTILEATGSESKKSGKPGP------FLLSGSRDKTIKMWDISTGMCLMT 326          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: T1I273_RHOPR (Uncharacterized protein n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1I273_RHOPR)

HSP 1 Score: 101 bits (251), Expect = 6.000e-25
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 1
Query:   13 YCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            YC +TL+GH +WVR+V +S DG ++AS  NDQ+V+VW +    +C  +LR H HVVE + +APES+   +  A             GA    F+ASGSRDKT+K+W+ + G CL T
Sbjct:   12 YCVKTLSGHREWVRQVRISPDGTLVASASNDQTVRVWVI-SSKECKAELRGHDHVVECIGWAPESSYSAVNEAAGADNKK------GAYEGPFLASGSRDKTIKVWDVSRGICLFT 120          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: A0A6L5CYW9_9INSE (LisH domain-containing protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CYW9_9INSE)

HSP 1 Score: 104 bits (259), Expect = 3.890e-24
Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   13 YCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            YC +T TGH +WVR V  S DG ++ASC NDQ+V+VW +    +C  +LR+H HVVE + +APE+A   +  A             GA A  F+ASGSRDKT+++W+   G CL T
Sbjct:  202 YCVKTFTGHREWVRAVRASPDGSLLASCSNDQTVRVW-LASTRECKIELRDHDHVVECITWAPETANSAINEAAGADNKK------GAHAGPFLASGSRDKTIRVWDVGTGLCLFT 310          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: A0A7R9HJ40_TIMPO (Hypothetical protein n=1 Tax=Timema poppense TaxID=170557 RepID=A0A7R9HJ40_TIMPO)

HSP 1 Score: 95.5 bits (236), Expect = 3.410e-23
Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 1
Query:   13 YCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVK 324
            YC +T TGH+DWVR V + +DG ++ASC NDQ+V+VW       C  +LR+H HVVE +A+AP+SA   +  A             GA A  F+ASGSRDKT+K
Sbjct:    1 YCVKTFTGHSDWVRMVRVYEDGSLIASCSNDQTVRVWYT-ANKDCKVELRDHDHVVECIAWAPDSAAPAINEAAGADNKK------GAHAGPFLASGSRDKTIK 97          
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Match: D7G1C0_ECTSI (Lissencephaly-1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C0_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.040e-22
Identity = 60/119 (50.42%), Postives = 68/119 (57.14%), Query Frame = 1
Query:    4 ATGYCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCLHDLREHTHVVETVAFAPESAQRTLAAATXXXXXXXXXXXXGAAARRFVASGSRDKTVKLWNATVGHCLMT 360
            ATG+CTRTL G ++WVRRV+LSDDG                                VVE++AFAPESA+R LA A             GA  RRFVASGSRDKTVKLWNA+VGHCLMT
Sbjct:  232 ATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VVESIAFAPESAERALATAVGSEGGGGGE---GAVRRRFVASGSRDKTVKLWNASVGHCLMT 346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11533.1217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B7BG64_9EUPU2.080e-2845.83Uncharacterized protein (Fragment) n=1 Tax=Arion v... [more]
A0A8M1KI82_CLUHA3.290e-2845.83lissencephaly-1 homolog B-like n=1 Tax=Clupea hare... [more]
A0A673IB16_9TELE1.200e-2646.55Lissencephaly-1 homolog B-like n=1 Tax=Sinocycloch... [more]
A0A6I9YCL1_9SAUR1.190e-2545.69platelet-activating factor acetylhydrolase IB subu... [more]
A0A6P3Q4Z2_PTEVA1.220e-2544.92Platelet-activating factor acetylhydrolase IB subu... [more]
A0A8C7QR40_ONCMY1.710e-2545.69LisH domain-containing protein n=1 Tax=Oncorhynchu... [more]
T1I273_RHOPR6.000e-2543.97Uncharacterized protein n=1 Tax=Rhodnius prolixus ... [more]
A0A6L5CYW9_9INSE3.890e-2444.83LisH domain-containing protein n=1 Tax=Ephemera da... [more]
A0A7R9HJ40_TIMPO3.410e-2347.12Hypothetical protein n=1 Tax=Timema poppense TaxID... [more]
D7G1C0_ECTSI1.040e-2250.42Lissencephaly-1 homolog n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11533contigH-elongata_contig11533:7420..8323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score106.7
Seed ortholog evalue7.7e-21
Seed eggNOG ortholog7091.BGIBMGA005503-TA
Preferred nameLis-1
KEGG rclassRC00037,RC00094
KEGG koko:K16794
KEGG ReactionR04452
KEGG Pathwayko00565,ko01100,map00565,map01100
GOsGO:0000003,GO:0000075,GO:0000132,GO:0000226,GO:0000278,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0000922,GO:0001654,GO:0001667,GO:0001709,GO:0001745,GO:0001751,GO:0001754,GO:0002064,GO:0002065,GO:0002066,GO:0003002,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005828,GO:0005856,GO:0005869,GO:0005874,GO:0005875,GO:0005876,GO:0005938,GO:0006355,GO:0006357,GO:0006403,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006810,GO:0006886,GO:0006897,GO:0006898,GO:0006928,GO:0006935,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007028,GO:0007049,GO:0007051,GO:0007093,GO:0007097,GO:0007098,GO:0007163,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007283,GO:0007292,GO:0007293,GO:0007294,GO:0007296,GO:0007297,GO:0007298,GO:0007300,GO:0007303,GO:0007304,GO:0007306,GO:0007308,GO:0007309,GO:0007310,GO:0007312,GO:0007346,GO:0007389,GO:0007399,GO:0007405,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007423,GO:0008017,GO:0008088,GO:0008090,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008298,GO:0008356,GO:0009058,GO:0009059,GO:0009605,GO:0009653,GO:0009798,GO:0009887,GO:0009888,GO:0009889,GO:0009950,GO:0009953,GO:0009966,GO:0009987,GO:0009994,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0010631,GO:0010646,GO:0010769,GO:0010927,GO:0010970,GO:0010975,GO:0015031,GO:0015629,GO:0015630,GO:0015631,GO:0015833,GO:0016043,GO:0016192,GO:0016319,GO:0016358,GO:0016462,GO:0016477,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019827,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0030010,GO:0030030,GO:0030154,GO:0030182,GO:0030286,GO:0030381,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030473,GO:0030510,GO:0030703,GO:0030705,GO:0030706,GO:0030707,GO:0030716,GO:0030723,GO:0030727,GO:0030855,GO:0031023,GO:0031175,GO:0031323,GO:0031326,GO:0031344,GO:0031616,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033267,GO:0033365,GO:0034248,GO:0034501,GO:0034502,GO:0034613,GO:0034641,GO:0034645,GO:0036477,GO:0040001,GO:0040011,GO:0042051,GO:0042052,GO:0042221,GO:0042330,GO:0042461,GO:0042462,GO:0042592,GO:0042623,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043043,GO:0043143,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045165,GO:0045184,GO:0045478,GO:0045595,GO:0045664,GO:0045786,GO:0045930,GO:0046530,GO:0046716,GO:0046843,GO:0046907,GO:0047496,GO:0048134,GO:0048135,GO:0048142,GO:0048232,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048592,GO:0048599,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048813,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050767,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051179,GO:0051225,GO:0051234,GO:0051239,GO:0051246,GO:0051252,GO:0051276,GO:0051293,GO:0051294,GO:0051299,GO:0051301,GO:0051336,GO:0051383,GO:0051640,GO:0051641,GO:0051642,GO:0051647,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051656,GO:0051663,GO:0051674,GO:0051704,GO:0051726,GO:0051960,GO:0060249,GO:0060255,GO:0060284,GO:0060322,GO:0060429,GO:0061351,GO:0061564,GO:0061842,GO:0061883,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070840,GO:0070925,GO:0071459,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072089,GO:0072384,GO:0072499,GO:0072583,GO:0080090,GO:0090092,GO:0090130,GO:0090132,GO:0090287,GO:0090596,GO:0097447,GO:0097458,GO:0097485,GO:0098657,GO:0098687,GO:0098727,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099518,GO:0099568,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0150034,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1902850,GO:1903047,GO:1903506,GO:2000026,GO:2000112,GO:2000574,GO:2001141
EggNOG free text desc.WD domain, G-beta repeat
EggNOG OGs38EAS@33154,3BB2N@33208,3CVPH@33213,3SI8P@50557,41UKW@6656,441C8@7088,KOG0295@1,KOG0295@2759
COG Functional cat.Z
Best tax levelLepidoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size360
Cds size360
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11533.1217.1prot_H-elongata_contig11533.1217.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11533 7420..8323 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929668.4066772-CDS-H-elongata_contig11533:7419..75101622929668.4066772-CDS-H-elongata_contig11533:7419..7510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11533 7420..7510 -
1691679112.6179008-CDS-H-elongata_contig11533:7419..75101691679112.6179008-CDS-H-elongata_contig11533:7419..7510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11533 7420..7510 -
1622929668.4222796-CDS-H-elongata_contig11533:7651..78031622929668.4222796-CDS-H-elongata_contig11533:7651..7803Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11533 7652..7803 -
1691679112.628338-CDS-H-elongata_contig11533:7651..78031691679112.628338-CDS-H-elongata_contig11533:7651..7803Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11533 7652..7803 -
1622929668.4398851-CDS-H-elongata_contig11533:8206..83231622929668.4398851-CDS-H-elongata_contig11533:8206..8323Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11533 8207..8323 -
1691679112.635969-CDS-H-elongata_contig11533:8206..83231691679112.635969-CDS-H-elongata_contig11533:8206..8323Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11533 8207..8323 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11533.1217.1

>prot_H-elongata_contig11533.1217.1 ID=prot_H-elongata_contig11533.1217.1|Name=mRNA_H-elongata_contig11533.1217.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
VATGYCTRTLTGHTDWVRRVSLSDDGEMMASCGNDQSVKVWSVHGGSQCL
HDLREHTHVVETVAFAPESAQRTLAAATAASGHSSSSSSFGAAARRFVAS
GSRDKTVKLWNATVGHCLMT
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mRNA from alignment at H-elongata_contig11533:7420..8323-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11533.1217.1 ID=mRNA_H-elongata_contig11533.1217.1|Name=mRNA_H-elongata_contig11533.1217.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=904bp|location=Sequence derived from alignment at H-elongata_contig11533:7420..8323- (Himanthalia elongata Himel1 dioecious)
GTCGCAACCGGATATTGCACGCGCACGCTGACAGGCCACACGGACTGGGT GCGACGAGTATCCTTGAGCGACGACGGGGAGATGATGGCTAGCTGCGGGA ACGATCAGTCTGTCAAGGTAAGCATGCAGGCCTACCGTATAGCTGTTGTA CGTGGGAGATAATAGAGTAGAAGGATGGATTTTGACTAGATGGATTTGAT AGGTCGGTCTTTGTTATGGGGTAGGGTCGAAAAGAGAAAACATGTTATAA AAACATGTTATAAAAAGCCACACGTTGGGATGTAAATATATGTATATATG TATATAGTGTCTCTTATGTTTCTTATGTCTCTTTAGGACGGAACAGGATT TGAGTAAAAACAAAACAAAACAAAAACGATGGTATTTTGACCGATCGATT CCCTCGATACCCCCTCCCGCCCCGCACGGCACGCAATCCCACGGTATTTA TTCCGCCTGTCTGATGTTGGAACACCCTCCCACATCCACACCCACTCGTC ACCTCACGTCACGTCTAAAGGTGTGGAGCGTACACGGCGGGAGTCAGTGC TTGCATGACCTGCGAGAGCACACGCACGTCGTGGAAACCGTCGCGTTCGC CCCGGAAAGCGCCCAACGGACGCTTGCGGCAGCCACGGCCGCCTCGGGGC ACAGCTCCTCTTCCTCGTCGTTGTCGTCGTTTTTATCGATGTCGGCGACA GCGAAAGCGAAAGCGCCGCCGCAAGCGAATGGGTCGGGGTTGCGGGGGCT GGGGAACGAGGGGAATGGGCCGTATGGGAGAGGCATCGTCGCCGAAGGGG ACGATGGGGACAGCGGGGCGGCGGCGCGGCGGTTCGTGGCATCCGGGTCG AGGGACAAGACGGTGAAGTTGTGGAACGCTACCGTGGGGCACTGTCTCAT GACC
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Coding sequence (CDS) from alignment at H-elongata_contig11533:7420..8323-

>mRNA_H-elongata_contig11533.1217.1 ID=mRNA_H-elongata_contig11533.1217.1|Name=mRNA_H-elongata_contig11533.1217.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig11533:7420..8323- (Himanthalia elongata Himel1 dioecious)
GTCGCAACCGGATATTGCACGCGCACGCTGACAGGCCACACGGACTGGGT
GCGACGAGTATCCTTGAGCGACGACGGGGAGATGATGGCTAGCTGCGGGA
ACGATCAGTCTGTCAAGGTCGCAACCGGATATTGCACGCGCACGCTGACA
GGCCACACGGACTGGGTGCGACGAGTATCCTTGAGCGACGACGGGGAGAT
GATGGCTAGCTGCGGGAACGATCAGTCTGTCAAGGTGTGGAGCGTACACG
GCGGGAGTCAGTGCTTGCATGACCTGCGAGAGCACACGCACGTCGTGGAA
ACCGTCGCGTTCGCCCCGGAAAGCGCCCAACGGACGCTTGCGGCAGCCAC
GGCCGCCTCGGGGCACAGCTCCTCTTCCTCGTCGTTGTGTGGAGCGTACA
CGGCGGGAGTCAGTGCTTGCATGACCTGCGAGAGCACACGCACGTCGTGG
AAACCGTCGCGTTCGCCCCGGAAAGCGCCCAACGGACGCTTGCGGCAGCC
ACGGCCGCCTCGGGGCACAGCTCCTCTTCCTCGTCGTTCGGGGCGGCGGC
GCGGCGGTTCGTGGCATCCGGGTCGAGGGACAAGACGGTGAAGTTGTGGA
ACGCTACCGTGGGGCACTGTCTCATGACCCGGGGCGGCGGCGCGGCGGTT
CGTGGCATCCGGGTCGAGGGACAAGACGGTGAAGTTGTGGAACGCTACCG
TGGGGCACTGTCTCATGACC
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