mRNA_H-elongata_contig11524.1213.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI) HSP 1 Score: 527 bits (1358), Expect = 1.590e-164 Identity = 479/958 (50.00%), Postives = 581/958 (60.65%), Query Frame = 1
Query: 1 TCEYDGGDCCPSTCVSTEDADCTVDTRECINPEAQDYPYAELESC---AGSWRYINDSICDEINNTEDCDYDGGDCCPSTCNASI--YCPEDQSHCIDPSAEDFGYAGFENCTGYMPDAGNGRCNSDNNNAECDYDSGDCCQCTCVPDIFNCVAGFDCVDPKVVDNNEEC-RGVEPCSVNMTQKWVVQDTAGASELAQSINCSGGVFNVEWIEYVIVTDIIWVTDQTTLSIKG-RKGERPAIADGNGTSRIIGVINATLHLENMQLTRGSAASAGALFVAEANVTFGGEIIFINNTSTLYSGGAIRVDGGGSISADGNLTFAHNTGAWHGAAIHSNSSTVSLHGTVTFVGNAVRTVGTSDGRSFGGAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGN-EACY-GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGGDAEXXXXFAIVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGPTVIWNRPVNFTHNVADFQGGAMYAVANTLTTA-ETSFHFNASTRFFNNSGGVYGGALMVSGSMTFTFGHYSLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAVYATGTXXVISTTGETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFEEGERYPVVCSGCSECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKCSDSWNTLVRWLVVPLAVMLGLVFIGYMISNEHRT---AKRGFLEIFEKLPLQSIKIVIVAWQILNE 2835
+C YDGGDCCPSTCVS+ CT DTR+C+NP A DYPYAE +C +G YI+D YDGGDCCPSTC S YCPED S C+DP A DFGY GFENCTGY P GNG C +NN EC+YD GDCC+C+C P + C+ FDC+DP N EC CS +++++W+V+DTA A ELA +INC+GG F+VEW VIV +WV+ TT++I G PA+ADGNG SRI GVIN++L+L M L+ G GA+F A VTF G +NN++ + I S +S VS G TF+GN + + G + G S+GG XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX EAC+ GG XXXXXXXXXXXXX XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ + N++T A E+ + +T FFNNS GGALM+SGS++ +F +F QN A AV L GVG G TF G +F +N A+IGGAV +TG+ I TG+ +P XXXXXXXXXXXX GA+ESAAG N++F GN A XXXXXXXXXXXXXXXXX GPAI ++G+ E + + F ND C +GFFL F +G RY VCSGC EC+ C + D+S P C DHTQSTG + ETL +D GYWRATP+++ IL C+N DACLGG TG+ ++CA GYEGPYCA CS G+AES+S C CSD T+V + +P V+LGL+F+ YM+S E + + + + LPLQS+KI+IV WQILNE
Sbjct: 57 SCLYDGGDCCPSTCVSSAGL-CTEDTRQCLNPSASDYPYAEYGNCTAMSGHLPYISDG------------YDGGDCCPSTCVVSTTDYCPEDNSECVDPFAVDFGYPGFENCTGYPPSMGNGLCIPENNIPECEYDGGDCCECSCQPAQYMCLGRFDCLDPSF--NTTECVTNTTACSPDLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVIVPQTLWVSQGTTVNITGVDTTASPAVADGNGESRIFGVINSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGSSALVNNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSAAS-VSWSGNTTFIGNRIYSFGHNGGFSYGGXXXXXXXXXXXXXXXXXXXXXXVDVDAVDREVVCXXXXXXXXXXXXXXXXXXXXXXXXEACFCGGALHANDTGIFXXXXXXXXXXXXXTSGGVLCLEWYSSASWSNSTAFVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVSALNSVTDATESVISIDGATSFFNNSCQNCGGALMISGSVSLSFASDGTQFLQNVAXXXXXAVCLTGVGEGPTFSGIRFDSNSAQIGGAVRSTGSGTTILATGDEFPVXXXXXXXXXXXXXXXXGAMESAAGKDLVANSTFLGNTAXXXXXXXXXXXXXXXXXXXXXXXXXEQGGPAIQNLGFMEGIEACTFADNDAVCPSGFFLDFVDGHRYSDVCSGCEECSDCGVADSSEVPTCTITPDHTQSTGNTI--ETLSIDPGYWRATPSTIIILACHNSDACLGGETGAADYCAEGYEGPYCAVCSDGFAESLSFTCSNCSDGKATVVALVALPTMVILGLIFLVYMVSRERKRDAPSAGPWHRLKRLLPLQSLKIMIVVWQILNE 996
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: A0A6H5JLP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP6_9PHAE) HSP 1 Score: 473 bits (1217), Expect = 1.400e-145 Identity = 428/899 (47.61%), Postives = 529/899 (58.84%), Query Frame = 1
Query: 196 CDYDGGDCCPSTCNASI--YCPEDQSHCIDPSAEDFGYAGFENCTGYMPDAGNGRCNSDNNNAECDYDSGDCCQCTCVPDIFNCVAGFDCVDPKVVDNNEEC-RGVEPCSVNMTQKWVVQDTAGASELAQSINCSGGVFNVEWIEYVIVTDIIWVTDQTTLSIKG-RKGERPAIADGNGTSRIIGVINATLHLENMQLTRGSAASAGALFVAEANVTFGGEIIFINNTSTLYSGGAIRVDGGGSISADGNLTFAHNTGAWHGAAIHSNSSTVSLHGTVTFVGNAVRTVGTSDGRSFGGAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GNEACYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGGDAEXXXXFAIVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGPTVIWNRPVNFTHNVADFQGG----------AMYAVANTLTTA-ETSFHFNASTRFFNNSGGVYGGALMVSGSMTFTFGHYSLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAVYATGTXXVISTTGETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFEEGERYPVVCSGCSECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKCSDSWNTLVRWLVVPLAVMLGLVFIGYMISNE-HRTAKRG--FLEIFEKLPLQSIKIVIVAWQILNE 2835
C YDGGDCCPSTC S YCPED S C+DP A DFGY GFE+CTGY P GNG C DNN EC YD GDCC+C+C P F C+ FDC+DP N EC C+ +++++W+V++TA A ELA +INC+GG F+VEW V+V +W++ TT++I G PA+ADGNG SRI GVIN++L+L M L+ G GA+F A VTF G +NN++ + I S S VS G TF+GN + + G + G S+GGAI XXXXXXXXXXXXXXXX NEAC+ GXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX ++ XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ + N++T A E+ + T FFNNS GGALM+SGS++ +F S +F QN A+S+GGAV L GVG G TF G +F +N A+IGGAV +TG+ + TGE +P ++GGA+ESAAG +N++F GN A XXXXXXXXXXXXXXXX GPAI ++GY + + + F N C +GFFL F +G+RY VCSGC ECN C++ D+S P C DH QSTG + ETL +D GYWRATP+S IL C+N DAC GG TG+ ++CA GYE CA CS G+AES+S C CSD T+V + +P+ VMLGL+ + YM+SNE +R A + + + LPLQS+KI+IV WQIL E
Sbjct: 6 CGYDGGDCCPSTCIVSTTDYCPEDNSQCVDPFAVDFGYPGFEDCTGYPPSMGNGLCIPDNNTPECGYDGGDCCECSCQPGQFMCLGRFDCLDPSF--NTTECVTNTTACAPDLSREWLVENTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVATTASPAVADGNGESRIFGVINSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALVNNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAILIRSAGS-VSWSGNTTFIGNQINSFGHNGGFSYGGAINAILXXXXXXXXXXXXXXXXIHVDAVDREVVCYGGAVAVDSNSSAIWSGSTLFEDNEACFCGXXXXXXXXXXXXXXXXXXXXXXQATSXXXXXXXXSGGAVCLEWYSSASWSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVSALNSVTDATESIISIDGITSFFNNSCQFCGGALMISGSVSLSFASDSTQFLQNVAESSGGAVCLTGVGEGPTFSGIRFDSNSAQIGGAVRSTGSGTTVLATGEEFPVTYTGCNFTGNWATASGGAIESAAGKDLVLNSTFLGNTAXXXXXXXXXXXXXXXXXXXXXXXXDEQGGPAIHNLGYMDGIEACTFADNHVVCPSGFFLDFVDGDRYSNVCSGCEECNDCVVADSSEVPTCTITPDHAQSTGNTI--ETLSIDPGYWRATPSSRNILACHNADACSGGETGAADYCAEGYED--CAVCSDGFAESLSFTCSNCSDGKATVVALVALPIMVMLGLILLVYMVSNERNRDAPSAGPWHRLKQLLPLQSLKIMIVVWQILTE 897
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: A0A6H5JMC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC1_9PHAE) HSP 1 Score: 327 bits (837), Expect = 6.920e-92 Identity = 376/926 (40.60%), Postives = 464/926 (50.11%), Query Frame = 1
Query: 115 YAELESCAGSWRYINDSICDEINNTEDCDYDGGDCCPSTCNASI-YCPEDQSHCIDPSAEDFGYAGFENCTGYMPDAGNGRCNSDNNNAECDYDSGDCCQCTCVPDIFNCVAGFDCVDPKVVDNNEECRGVEPCSVNMTQKWVVQDTAGASELAQSINCSGGVFNVEWIEYVIVTDIIWVTDQTTLSIKGRKGERPAIADGNGTSRIIGVINATLHLENMQLTRGSAASAGALFVAEANVTFGGEIIFINNTSTLYSGGAIRVDGGGSISADGNLTFAHNTGAWHGAAIHSNSSTVSLHGTVTFVGNAVRTVGTSDGRSFGGAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GNEACY-GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGGDAEXXXXFAIVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGPTVIWNRPVNFTHNVADFQGGAMYAVANTLTTA-ETSFHFNASTRFFNNSGGVYGGALMVSGSMTFTFGHYSLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAVYATGTXXVISTTGETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFEEGERYPVVCSGCSECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEG----------PYCASCSRGYAESISHVCRKCSDSWNTLVRWLVVPLAVMLGLVFIGYMISNEHRTAKRG-----FLEIFEKLPLQSIKIVIVAWQILNE 2835
Y + E C GS + D +CD NN C YDGGDCCPSTC +S C ED C++PSA D+ Y +E+CT + + P + D GV+ TT S PA+ADGNG SRI GVIN++L+L M L+ G + GA+F A VTF G +NN++ + I S S VS G TF+GN + + G + G S+GGAI XXXXXXXXXXXXXXXX NEAC+ G XXXXXXXXXXXXXXXXXXXXXXX XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGA+ + +++T A E+ + T FFNNS GGALM+SGS++ +F +F QN A+S AV L GVG G TF G +F +N A+IGGAV +TG+ I TGE +P ++GGA+ESAAG VN++F GN A++ XXXXXXXXXXXXXXX GPAI ++G+ + + + F ND C +GFFL F +G+RY VCSGC ECN C + DNS P C DH QSTG V ETL +D GYWRATP+S IL C+N DACLGG TG+ ++CA GYEG P CA CS G+AES+S C CSD T+V + +P+ V+LGL+F+ YM+S E + + + + LPLQS+KI+IV WQIL E
Sbjct: 31 YTDYELCTGSLATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPYEDYEDCTAILGNL-----------------------------------------PYISD------GVD---------------------------------------------------TTAS--------PAVADGNGESRIFGVINSSLNLHGMTLSNGHGVAGGAIFSALGTVTFSGGSALVNNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILIRSAGS-VSWSGNTTFIGNRIYSFGHNGGFSYGGAINAILXXXXXXXXXXXXXXXXIDIDAVDREVVCYGGAVAVDSNSSAIWSGSTLFEDNEACFCGXXXXXXXXXXXXXXXXXXXXXXXXTSGGVVCLEWYSSASWSNSTAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYGGAVVSPLDSVTDATESIISIDGITSFFNNSCQSCGGALMISGSVSLSFASDGTQFLQNVAESXXXAVCLTGVGEGPTFSGIRFDSNSAQIGGAVRSTGSGTTILATGEEFPVTYTGCNFTGNWATASGGAMESAAGKDLVVNSTFLGNTASQXXXXXXXXXXXXXXXXXXXXXADEQGGPAIHNLGFMDGIEACTFADNDVVCPSGFFLDFVDGDRYSNVCSGCEECNDCDVADNSEVPTCTITPDHAQSTGSTV--ETLSIDRGYWRATPSSRNILACHNADACLGGETGAADYCAEGYEGALKSVSCTREPDCAVCSDGFAESLSFTCSNCSDGKATVVALVALPIMVILGLIFLVYMVSKERDRDRDAPPAGPWHRLKQLLPLQSLKIMIVVWQILTE 847
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 253 bits (645), Expect = 5.990e-66 Identity = 163/394 (41.37%), Postives = 220/394 (55.84%), Query Frame = 1
Query: 1675 QGGAMYAVA--NTLTTAETSFHFNASTRFFNNSGGVYGGALMVSGSMTFTFGHYSLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAVYATGTXXVISTTGETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFEEGER--YPVVCSGCS-ECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKC-SDSWNTLVRWLVVPLAVMLGLVFIGYMISNEHRTAKRGFLE-IFEKLPLQSIKIVIVAWQILNE 2835
+GGAM + + + E+S N +T FFNN+ G GG+L + + + + F N A GGAV + G G G TF FI+N A++GGA G+ P ++GGAV+SAAG VN+ F GN A GGALRL XXXXXXXXXXXX G A+S++G M +S F GN F+C FL ++ + + VC GC C+GC ++ + P C + DH STGG V LETL +D GYWRAT +S EIL CYN DACLGG+TG+ +C YEGPYC+ CS GYA ++ + C KC S S + + LA+ + +V I Y++S E + LE + +PLQS+KIVIV+WQIL +
Sbjct: 706 EGGAMMSPSYDSEYNPLESSLVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQ 1099
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 251 bits (642), Expect = 1.280e-65 Identity = 143/413 (34.62%), Postives = 214/413 (51.82%), Query Frame = 1
Query: 1624 TVIWNRPVNFTHNVADFQGGAMYA--VANTLTTAETSFHFNASTRFFNNSGGVYGGALMVSGSMTFTFG-HYSLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAV--YATGTXXVISTTGETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFEEGER-YPVVCSGC-SECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKCSDSWNTLVRWLVVPLA-VMLGLVFIGYMISNEHRTAKRGFLE-IFEKLPLQSIKIVIVAWQILNE 2835
T W NFT N A F GGA+ + + + +E++ +FN +T FFNN G GG + + G + F +N A +GGAV + GTGL F F++N A+IGGAV + +G + P +TGGA+++AAG +FV+T+F N A GGALRL G A+S++G F GN F C G FL + E + + VC GC + + P+C++ +H+ S G + LE L + GYWRAT TS E+L CY+ +ACLGG+TG+ +C GY+GPYCA CS G++ CR+CSDS +V + + +A + +V + Y+ S + +G +E + +PLQS+KIV+VAWQ++ +
Sbjct: 680 TASWTGVTNFTSNQAFFDGGAIVSPQLDSEYNPSESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQ 1092
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 249 bits (637), Expect = 1.340e-65 Identity = 139/355 (39.15%), Postives = 190/355 (53.52%), Query Frame = 1
Query: 1786 ALMVSGSMTFTFGHYSLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAVYATGTXXVISTTGET-YPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFEE-GERYPVVCSGCS-ECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKCSDSWNTLVRWLVVPLAVMLGLV-FIGYMISNEHRTAKRGFLEIFEK-LPLQSIKIVIVAWQILNE 2835
AL + G ++ T G + F N A GGA+ + G G TF ++N A++GGA+ G+ + T P +TGGAV++AAG FVN+ F GN A GGALRL G A+S++G+ + + F N + C G FL EE G Y +C GC EC GC + P C +A +H+ S+GG V L+ L+++ GYWRATP+S +LECYN DACLGG+TGS +C GYEGPYCA CS GY + C KCSD ++ + V +A +L V + Y +S E RG +E + +PLQS+KIVIVAWQIL +
Sbjct: 295 ALALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQ 649
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 247 bits (630), Expect = 5.700e-64 Identity = 149/400 (37.25%), Postives = 211/400 (52.75%), Query Frame = 1
Query: 1672 FQGGAMYAVA--NTLTTAETSFHFNASTRFFNNSGGVYGGALMVSGSMTFTFGHY-SLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAV--YATGTXXVISTTGETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFE-EGERYPVVCSGC-SECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKCSDSWNTLVRWLVVPLAVMLGLVF----IGYMISNEHRTAKRGFLE-IFEKLPLQSIKIVIVAWQILNE 2835
F GGA+ + + L ++ N +T FFNN+ G GGA+ + G+ S+ F +N A GGAV + G G G F F +N A++GGAV + +G ++ P +TGGA++SAAG+ YFV+T+F N A GGALRL G A+S++G E + F N F C +G FL + + + VC+GC + C GC D P C + +H+ S+ G LETL + GYWRAT + E+L CY+ DACLGG+TG++ +C GYEGPYCA CS GY+ +S CR CSD+ + L LAV+ GLV + Y+ S E RG +E + +PLQS+KIV+VAWQI+ +
Sbjct: 887 FDGGAIVSPEFDDELNLENSAILINGTTSFFNNACGGNGGAVTLLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIA--LAAALAVV-GLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQ 1283
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 242 bits (617), Expect = 1.600e-62 Identity = 138/372 (37.10%), Postives = 192/372 (51.61%), Query Frame = 1
Query: 1738 NASTRFFNNSGGVYGGALMVSGSMTFTFGHYSLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAVYATGTXXVISTT--GETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFE-EGERYPVVCSGC-SECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKCSDSWNTLVRWLVVPLAVM-LGLVFIGYMISNEHRTAKRGFL-EIFEKLPLQSIKIVIVAWQILNE 2835
N +T F NN+ G GGAL + G + G ++ F N A+ GGAV + G G G F G +FI+N A++GGAV G+ + P +TGGA++SAAG FVN++F GN A GG LRL G A+S++G + + F GN F CD G +L + G Y C GC + C+GC + P C + +H S GG V LE L ++ GYWRA+P+S E+ CYN DACLGG+TG +C GYEGPYCA CS GY ++ C +CS + V+ + V+ + Y +S + G + + + +PLQS+KIVIVAWQIL +
Sbjct: 558 NGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFF-EPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQ 928
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 233 bits (594), Expect = 5.300e-60 Identity = 136/382 (35.60%), Postives = 201/382 (52.62%), Query Frame = 1
Query: 1708 LTTAETSFHFNASTRFFNNSGGVYGGALMVSGSMTFTFGHYSLEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAVYATGTXXVIS-TTGETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLFEEGERYPVVCSGC-SECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKCSDSWNTLV---RWLVVPLAVMLGLV-FIGYMISNEHRTAKRGFLEIFEKLPLQSIKIVIVAWQILNE 2835
L+ +++ + T F NN+ G GGAL + G ++ + F N A GGAV + G TF F +N A++GGAV + G+ V + P +TGGAV+SA+G F +T F GN A GGALRL G A+S+VG ++ ++ F GN F+C FL + G+ CSGC + C+GC+ P+C + H++S GG V LETL +D GYWRAT +S E+L CYN DAC+GG+TG+TE+C GYEGPYCA CS Y+ + C KC + ++ V+ L ++ +V ++ + + A G L+ + LPLQ++KI++VAWQI+ +
Sbjct: 312 LSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTSGDALDEACSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRY--LPLQTLKILVVAWQIVTQ 689
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 230 bits (586), Expect = 1.850e-58 Identity = 136/342 (39.77%), Postives = 184/342 (53.80%), Query Frame = 1
Query: 1834 LEFEQNRAKSTGGAVLLVGVGTGLTFRGCKFIANQAEIGGAVYATGTXXVISTTGETYPXXXXXXXXXXXXXFSTGGAVESAAGNTYFVNTSFGGNVATEGGALRLXXXXXXXXXXXXXXXXXXXXGPAISDVGYTEDMRSSYFVGNDFSCDAGFFLLF--EEGERYPVVCSGCS-ECNGCILNDNSSYPICKEAFDHTQSTGGDVVLETLILDEGYWRATPTSLEILECYNQDACLGGLTGSTEFCATGYEGPYCASCSRGYAESISHVCRKCSDSWNTLVRWLVVPLAVMLGLVFIG---YMISNEHRTAKR-GFLE-IFEKLPLQSIKIVIVAWQILNE 2835
+ F N A GGA+ L GV TG F F +N AEIGGAV G I +G P STGGA+ESAAG F + F GN A GGALRL G A+S++GY + S++F GN F C + +L F + + + V+CSGC C GC+ ++ P C E +H S GG++ LE L +D GYWRAT +S ++L CY+ +ACLGG+T ++ +C GYEGPYC+ CS GY+E + VC KC + NT ++V LAV +V Y+ S E G++E + +PLQS+KIVI AWQIL +
Sbjct: 957 ISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCG--IEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEK-NTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQ 1295 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11524.1213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11524.1213.1 >prot_H-elongata_contig11524.1213.1 ID=prot_H-elongata_contig11524.1213.1|Name=mRNA_H-elongata_contig11524.1213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=946bp TCEYDGGDCCPSTCVSTEDADCTVDTRECINPEAQDYPYAELESCAGSWRback to top mRNA from alignment at H-elongata_contig11524:2366..6286- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11524.1213.1 ID=mRNA_H-elongata_contig11524.1213.1|Name=mRNA_H-elongata_contig11524.1213.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3921bp|location=Sequence derived from alignment at H-elongata_contig11524:2366..6286- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11524:2366..6286- >mRNA_H-elongata_contig11524.1213.1 ID=mRNA_H-elongata_contig11524.1213.1|Name=mRNA_H-elongata_contig11524.1213.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5676bp|location=Sequence derived from alignment at H-elongata_contig11524:2366..6286- (Himanthalia elongata Himel1 dioecious)back to top |