mRNA_H-elongata_contig11472.1171.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A6H5KQH0_9PHAE (Pep3_Vps18 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH0_9PHAE) HSP 1 Score: 367 bits (941), Expect = 4.270e-115 Identity = 206/299 (68.90%), Postives = 235/299 (78.60%), Query Frame = 1
Query: 1 KVMFREHRESGSSSFQELPGSMLGTELHVYRRASRVGASSRMAEATTSGVGASVGAVGAASAHGAPAGLRHITKESTQSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
+VMFREHRESG++SF+ELPG+ML TELHVYR++ ++ G G A+ H + G KE SFALLTSMGIY+GSLAL ++ATP NVI++AQL PYP EA+ +S GXXXXXX + +PLSMA+TEFHFLLLFT RL+VVSRLNGAVVQEESLE D T+GHVLT+LTDPYTGGG AMQG A G GVANRLWLFTDRLPFK+RVSHE+R+VWMLFLEKA+AGEE HFE AAQHCKNA ERAQVHYVQAGWYFRRGQHT+AARYYAKTPCCFEEI
Sbjct: 428 EVMFREHRESGTNSFRELPGNMLSTELHVYRKSLGAAGGAKKGLDREEGSGXXXXXXXXAAGHLSGRGGVKRQKEVPHSFALLTSMGIYHGSLALGNDATPGNVISEAQLVPYP-----EAAEAGDS-GXXXXXXTIARSSSPLSMAMTEFHFLLLFTGRLQVVSRLNGAVVQEESLETHDPTMGHVLTLLTDPYTGGG-AMQGAA-PGIGVANRLWLFTDRLPFKLRVSHEERNVWMLFLEKAVAGEEAHFEDAAQHCKNAVERAQVHYVQAGWYFRRGQHTVAARYYAKTPCCFEEI 718
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: D8LI29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI29_ECTSI) HSP 1 Score: 355 bits (912), Expect = 4.560e-113 Identity = 211/322 (65.53%), Postives = 236/322 (73.29%), Query Frame = 1
Query: 1 KVMFREHRESGSSSFQELPGSMLGTELHVYRRASRVGASSRMAEATTSGVGASVGA-----------------------VGAASAHGAPAGLRHITKESTQSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
+VMFREHRESG++SF+ELPG+ML TELHVYR++ +GA+ GA G S G G+R KE SFALLTSMGIY+GSLAL ++ATP NVI++AQL PYPE EA XXXXXXX+ +PLSMA+TEFHFLLLFT RL+VVSRLNGAVVQEESLE D T+GHVLT+LTDPYTGGG AMQG A G GVANRLWLFTDRLPFK+RVSHE+RDVWMLFLEKA+AGEE HFE AAQHCKNA ERAQVHYVQAGWYFRRGQHT+AARYYAKTPCCFEEI
Sbjct: 33 EVMFREHRESGTNSFRELPGNMLSTELHVYRKS----------------LGAAGGAKKGLDKEDXXXXXXXXXXXXXXXAGPLSGRG---GVRR-HKEVPHSFALLTSMGIYHGSLALGNDATPGNVISEAQL--VPYPEAAEAG--EXXXXXXXXXXXVARSSSPLSMAMTEFHFLLLFTGRLQVVSRLNGAVVQEESLETHDPTMGHVLTLLTDPYTGGG-AMQGAA-PGIGVANRLWLFTDRLPFKLRVSHEERDVWMLFLEKAVAGEEAHFEDAAQHCKNAVERAQVHYVQAGWYFRRGQHTVAARYYAKTPCCFEEI 328
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A015NFV0_RHIIW (Pep3p n=11 Tax=Glomeraceae TaxID=36751 RepID=A0A015NFV0_RHIIW) HSP 1 Score: 122 bits (306), Expect = 2.040e-27 Identity = 78/222 (35.14%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 232 QSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
++FA LT GIY+GSL S+ T D+VI A+L PYP +++ + PLS A+TEFHF+LL+ +R++ + +LN VV ++ + + V TM D V N W++TD F++ VS EDRDVW L+LEK + F++A Q+CKN +R +V QA YF + ++ L+A YYA++ FEE+
Sbjct: 301 KNFAWLTGPGIYHGSLVFGSQDTGDSVIDSAKLLPYPSTANNDSTAVAEF---------------PLSSALTEFHFILLYKERVKAICQLNDQVVFDDVIPLKPGE--EVRTMTVDH-----------------VKNTFWIYTDSSIFELIVSKEDRDVWKLYLEK------QQFDTALQYCKNPAQRDKVLTTQAEHYFSQKRYLLSASYYAESTVPFEEV 482
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A397GW99_9GLOM (Pep3_Vps18 domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GW99_9GLOM) HSP 1 Score: 119 bits (299), Expect = 1.720e-26 Identity = 77/224 (34.38%), Postives = 117/224 (52.23%), Query Frame = 1
Query: 226 STQSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
S ++FA LT GIY+G+L S+ D+VI AQL PYP A+ + N + PLS+A+TEFH +LL+ +R+ + LN +V E+ + + + TM D V N W++TD +++ VS EDRDVW L+LEK + F+++ Q+CKN +R +V QA YF +G+ L+A YYA++ FEE+
Sbjct: 298 SAKTFAWLTGPGIYHGNLVFGSQDVGDHVIDSAQLLPYP------AATSEND-------PSTLVPEIPLSIALTEFHLILLYKERVRAICLLNDQIVYEDIIPLKSGEA--IRTMTVD-----------------NVKNTFWIYTDSSIYELIVSKEDRDVWKLYLEKQM------FDTSLQYCKNPAQRDKVLTSQAEHYFSQGRFLLSANYYAQSTVPFEEV 483
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A433PKV8_9FUNG (Pep3/Vps18/deep orange family-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PKV8_9FUNG) HSP 1 Score: 119 bits (297), Expect = 3.050e-26 Identity = 77/222 (34.68%), Postives = 116/222 (52.25%), Query Frame = 1
Query: 232 QSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
Q+FA LT GIY+GSL S+ D+VI A L PYP S S PLS+A+T+FHF+LL+ DR+ +++LN +V EE + P + G + ALT V N W++T+ ++ + E+RDVW L+LEK + +++A QHC + +R +V QA YF +G++ L+ARYYA++ FEE+
Sbjct: 315 QTFAWLTGPGIYHGSLVFGSQDVGDSVIDSALLLPYPATSSDAESSKSE---------------VPLSIALTKFHFILLYKDRVRAINQLNDQIVYEEMI----------------PLSPG---QEVRALTVDSVKNTFWVYTNDSVHELLIVREERDVWRLYLEK------KQYDAALQHCNDPAQRDRVVTTQANDYFAQGRYQLSARYYAESAVPFEEV 496
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A4P9ZNF9_9FUNG (Pep3/Vps18/deep orange family-domain-containing protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZNF9_9FUNG) HSP 1 Score: 115 bits (289), Expect = 3.220e-25 Identity = 72/222 (32.43%), Postives = 112/222 (50.45%), Query Frame = 1
Query: 232 QSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
+ FA LT G+Y+G L S+ T D+V++D L PYP R+ + S+ G AP+SMA+TEFH +LL+ ++ V LN VV EE++ L + D N W+FT F++ + +EDRDVW ++L+K + +++A QH KN E+ + QA Y+ +G++ L+A YYA+T FEE+
Sbjct: 253 EKFAWLTGSGVYHGQLVYGSQGTGDSVVSDPVLLPYP----RDHPTSGTSVE---------GPEAPISMALTEFHIILLYRHSVKAVCLLNDEVVYEETINMASGYGERALGLSVDS-----------------THNTYWVFTPSSVFELIIHNEDRDVWKIYLQKRM------YDTAFQHAKNPAEKNHILGAQADHYYTQGRYVLSATYYAQTTRNFEEV 438
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A5D6XVF9_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF9_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.890e-25 Identity = 79/228 (34.65%), Postives = 116/228 (50.88%), Query Frame = 1
Query: 220 KESTQSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALA--GEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
+E + F +LT G+++G L S +T DN I + L + S +S G PL++A+T++H +LL+ ++VVS+L+G VV +E L DA VG V + DP N +W+ +DR +V ++ EDR+VW LFL KA+A G++ FE A C++A ER V QA YF RG+ AA YAKT FEE+
Sbjct: 307 RERAKCFGILTGEGVFHGDLVFGSASTVDNTITGSDLLAF-----HGKSESSTGAGGSTRPWA-----PPLALAVTQYHVILLYARSVQVVSKLSGVVVLDEPL---DARVGTVHGLAHDP-----------------TGNTVWVHSDRRILEVVIADEDRNVWKLFLNKAVASAGDDRDFEHALSVCRSAAERQHVFTAQADKYFDRGEFDRAAVVYAKTNRSFEEV 504
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A4P9XUK0_9FUNG (Pep3/Vps18/deep orange family-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XUK0_9FUNG) HSP 1 Score: 113 bits (283), Expect = 1.990e-24 Identity = 78/222 (35.14%), Postives = 112/222 (50.45%), Query Frame = 1
Query: 232 QSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
+ FA L G+Y+G+L S+A D+VI +A+L PYP P + T G APLS A+TEFHF++LF DRL V +LN VV EE L A D ++ DP + W +T +++ V EDRDVW L+L+ +++A + CK+A++R V QA YF G++ L+A YYA+T FEE+
Sbjct: 244 EKFAWLVGPGVYHGNLVFGSQAAGDSVIDNAKLLPYP-PRLHQTPPT--------------GPDAPLSFALTEFHFVMLFNDRLLAVCQLNNEVVYEEPL-AIDLDYRR---LVVDP-----------------IKRTYWAYTGASIYELIVEDEDRDVWRLYLKSRA------YDTALRFCKDASQRDHVRTAQANHYFDTGRYLLSADYYAQTAVPFEEV 423
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A1Y1Y992_9FUNG (Pep3_Vps18 domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y992_9FUNG) HSP 1 Score: 113 bits (283), Expect = 2.210e-24 Identity = 70/220 (31.82%), Postives = 116/220 (52.73%), Query Frame = 1
Query: 238 FALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
F LT GIY+G L S+ D+VI AQL PY P EA + P+S+A+TEFHF+LL+ DR+ V +LN VV E+++ + H+L M+ D N W+FT+ +++ V++ED+++W L+LEK + F++A Q+ K+ ++ ++ QA +YF +G++ L+A Y+A++ FEE+
Sbjct: 312 FCWLTGPGIYHGDLVFGSQGVGDSVIDSAQLLPYA-PTSYEADQSETK--------------GPISIAVTEFHFILLYDDRIRAVCQLNDQVVYEDAIPLAPSQ--HILGMVVDS-----------------TKNTYWVFTNVSIYELIVANEDKNMWSLYLEKMM------FDAALQYAKSPIQKDKILTAQAEYYFSQGRYLLSANYFAQSTVSFEEV 491
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Match: A0A433QGH9_9FUNG (Pep3/Vps18/deep orange family-domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QGH9_9FUNG) HSP 1 Score: 113 bits (282), Expect = 3.060e-24 Identity = 77/222 (34.68%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 232 QSFALLTSMGIYNGSLALDSEATPDNVIADAQLSPYPYPERREASLTSNSLGXXXXXXXLMGGPAPLSMAITEFHFLLLFTDRLEVVSRLNGAVVQEESLEAQDATVGHVLTMLTDPYTGGGGAMQGGALTGTGVANRLWLFTDRLPFKVRVSHEDRDVWMLFLEKALAGEEEHFESAAQHCKNATERAQVHYVQAGWYFRRGQHTLAARYYAKTPCCFEEI 897
Q+FA LT GIY+G+L S D+VI A L PYP AS T S ++ PLS+A+TEFHF+LL+ DR+ +++LN +V EE + P G + LT V N W++T+ ++ V+ EDRDVW L+L+ +H+++A Q+CK+ +R +V QA YF +G++ L+A+Y+A + FEE+
Sbjct: 350 QTFAWLTGPGIYHGNLVFGSG---DSVIDSAHLLPYP----ATASDTDPSA--------VVVSEVPLSIALTEFHFVLLYKDRVRAINQLNDQIVYEEMI----------------PLAAGKEVRR---LTIDSVKNTFWIYTNSSIHELLVTREDRDVWRLYLDG------KHYDTALQYCKDPAQRDRVFTTQANDYFAQGRYQLSAKYFADSTVPFEEV 531 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11472.1171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11472.1171.1 >prot_H-elongata_contig11472.1171.1 ID=prot_H-elongata_contig11472.1171.1|Name=mRNA_H-elongata_contig11472.1171.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp MFREHRESGSSSFQELPGSMLGTELHVYRRASRVGASSRMAEATTSGVGAback to top mRNA from alignment at H-elongata_contig11472:45..6686- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11472.1171.1 ID=mRNA_H-elongata_contig11472.1171.1|Name=mRNA_H-elongata_contig11472.1171.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6642bp|location=Sequence derived from alignment at H-elongata_contig11472:45..6686- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11472:45..6686- >mRNA_H-elongata_contig11472.1171.1 ID=mRNA_H-elongata_contig11472.1171.1|Name=mRNA_H-elongata_contig11472.1171.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1782bp|location=Sequence derived from alignment at H-elongata_contig11472:45..6686- (Himanthalia elongata Himel1 dioecious)back to top |