mRNA_H-elongata_contig114620.1165.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig114620.1165.1
Unique NamemRNA_H-elongata_contig114620.1165.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: D8LQ11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ11_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.590e-45
Identity = 83/152 (54.61%), Postives = 93/152 (61.18%), Query Frame = 1 
Query:    1 DHARMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRM----GCSVAETGAIPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            +H+ ++RANLEA LELKLPSPAT+A  DYSADCGICY+YRLQ  +                               T            G +  + GAIPDRVCDN +CRRPYHP CL  WLQGLPTSRVSFDT FGQCPYCSDPISVK AP
Sbjct:  268 NHSLLVRANLEAALELKLPSPATTAKADYSADCGICYAYRLQRDDAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXTRXXXXXXXXXXXGAAAEDAGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKFAP 419
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: M4BBE4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBE4_HYAAE)

HSP 1 Score: 126 bits (316), Expect = 8.830e-32
Identity = 62/148 (41.89%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 DHARMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGAIPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            D +R ++ANLE  L +KLPSP T+  E+ +A+CGICY+YRL+  + + +    R   G G  P+               S++ R  C       +PDR+C+N +C RP+H  CL  WL+ LPTSR SF T FG+CPYC D IS K+ P
Sbjct:  282 DESRSMQANLEDVLNIKLPSPTTTKLEELAAECGICYAYRLEDGKDETNNKAER---GSGALPMQSE------------SKQERGSC-------LPDRLCENVKCNRPFHAKCLYDWLRALPTSRQSFHTIFGECPYCRDAISAKLEP 407
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: D0NA27_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NA27_PHYIT)

HSP 1 Score: 120 bits (302), Expect = 8.180e-30
Identity = 64/148 (43.24%), Postives = 77/148 (52.03%), Query Frame = 1 
Query:    1 DHARMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGAIPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            D  R L  NLE  LEL LPSP T+ AE+++ +CGICYSYRL+  EG                      P   K     GSR             IPDR+C+N +C RP+H  CL  WL+ LPTSR SF T FG+CPYC + IS K  P
Sbjct:  278 DELRPLHKNLEDVLELTLPSPKTTKAEEFAIECGICYSYRLEVEEGNEE---------------EAKNPMQRKAVEEQGSR-------------IPDRLCENTKCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKFQP 397
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: W2QM74_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QM74_PHYPN)

HSP 1 Score: 120 bits (300), Expect = 1.660e-29
Identity = 63/148 (42.57%), Postives = 78/148 (52.70%), Query Frame = 1 
Query:    1 DHARMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGAIPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            D +R L  NLEA LE+ LPSP T+  E+++ +CGICYSYRL   E                A     G +  K     GSR             IPDR+C+N +C RP+H  CL  WL+ LPTSR SF T FG+CPYC + IS K  P
Sbjct:  278 DESRPLHKNLEAVLEVTLPSPKTAKVEEFAVECGICYSYRLVDEEDNEE------------AKQEPDGTNQCKTVEEQGSR-------------IPDRLCENTKCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKFQP 400
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: A0A3F2RLG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLG7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.400e-29
Identity = 56/141 (39.72%), Postives = 75/141 (53.19%), Query Frame = 1 
Query:   25 NLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGA-IPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            NLE  LE+ LPSP T+  E++  +CGICYSYRL+  +                            +    G++E +   + A+ G  IPDR+C+N  C RP+H  CL  WL+ LPTSR SF T FG+CPYC + IS K  P
Sbjct:  171 NLEDVLEMALPSPKTTKPEEFEVECGICYSYRLEEED-------------------------ETNEESEQGTKESKQRTATADRGPRIPDRLCENANCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKFQP 286
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: G5AAM0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AAM0_PHYSP)

HSP 1 Score: 118 bits (296), Expect = 5.960e-29
Identity = 62/149 (41.61%), Postives = 81/149 (54.36%), Query Frame = 1 
Query:    1 DHARMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGA-IPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            D  + L+ NLE  L + LPSP T+  E+++ +CGICY YRL   EG+    G R+ G +  A                          VAE G+ IP+R+C+NP C RP+H  CL  WL+ LPTSR SF T FG+CPYC + IS K  P
Sbjct:  277 DETKSLQKNLENVLGVALPSPKTTKPEEFAVECGICYLYRL---EGEDESTGERKDGNQRKA--------------------------VAEEGSRIPNRLCENPNCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCRETISAKFQP 396
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: A0A329T142_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T142_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.230e-28
Identity = 64/149 (42.95%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:    1 DHARMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGA-IPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            D +  L  NLE  LE+ LPSP T+ AE+++ +CGICYSYRL+  E                        +  +K  T GS + RM     E G+ IPDR+C+N +C RP+H  CL  WL+ LPTSR SF T FG+CPYC + IS K  P
Sbjct:  278 DESIPLHKNLENVLEVTLPSPKTTKAEEFAIECGICYSYRLEDEEDN----------------------NEEEKQETDGSIQ-RM---TEERGSRIPDRLCENTKCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKFQP 400
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: H3GXE1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXE1_PHYRM)

HSP 1 Score: 117 bits (292), Expect = 2.320e-28
Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 1 
Query:    1 DHARMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGAIPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            D  + L+ NLE  LE+ LPSP T+  E+++ +CGICYSYRL+  +                      G +S +++   GSR             IPDR+C+N  C RP+H  CL  WL+ LPTSR SF T FG+CPYC + IS K  P
Sbjct:  277 DENKSLQRNLEHVLEVTLPSPQTTKPEEFAVECGICYSYRLEGEDDDDD-------------EAQEAGTASTQRNTEQGSR-------------IPDRLCENSNCNRPFHSKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKFQP 398
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: A0A2P4X1Z8_9STRA (E3 ubiquitin-protein ligase FANCL-like n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X1Z8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.210e-27
Identity = 61/149 (40.94%), Postives = 81/149 (54.36%), Query Frame = 1 
Query:    1 DHARMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGA-IPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP 444
            D  R L+ NLE  LE+ LPSP T+  E+++ +CGICYSYRL+   G+                        VK     GS + +   +  E G+ IPDR+C+N  C RP+H  CL  WL+ LPTSR SF + FG+CPYC + IS K  P
Sbjct:  277 DETRSLQKNLEEVLEVILPSPKTTKPEEFAVECGICYSYRLEEENGEE-----------------------VKDD--VGSMQDK---TTTEQGSRIPDRLCENANCNRPFHAKCLFDWLRALPTSRQSFHSVFGECPYCREAISAKFQP 397
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BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Match: A0A662XSS3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSS3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.960e-27
Identity = 57/142 (40.14%), Postives = 81/142 (57.04%), Query Frame = 1 
Query:   10 RMLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSRRAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGAIPDRVCDNPRCRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVK 435
            R L++NLE  LE++LPSP  +  E+++ +CGICYSYRL+  E +               P+ +    ++ +     ++ V  G        IPDR+C+NP C RP+H  CL  WL+ LPTSR SF T FG+CPYC + IS K
Sbjct:  290 RSLQSNLEDVLEVELPSPKDTKPEEFAVECGICYSYRLETEEEEQ--------------PIENADTQAIGE-----AQAVERGTR------IPDRLCENPNCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCREAISAK 406
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114620.1165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ11_ECTSI1.590e-4554.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
M4BBE4_HYAAE8.830e-3241.89Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0NA27_PHYIT8.180e-3043.24Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
W2QM74_PHYPN1.660e-2942.57Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A3F2RLG7_9STRA3.400e-2939.72Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
G5AAM0_PHYSP5.960e-2941.61Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A329T142_9STRA1.230e-2842.95Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
H3GXE1_PHYRM2.320e-2839.86Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2P4X1Z8_9STRA1.210e-2740.94E3 ubiquitin-protein ligase FANCL-like n=1 Tax=Phy... [more]
A0A662XSS3_9STRA1.960e-2740.14Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114620contigH-elongata_contig114620:445..1935 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.8
Seed ortholog evalue2.4e-37
Seed eggNOG ortholog2880.D8LQ11
Preferred nameFANCL
KEGG koko:K10606,ko:K17426
KEGG Pathwayko03460,ko04120,map03460,map04120
KEGG ModuleM00413
GOsGO:0000003,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006464,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007276,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016567,GO:0016604,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0019953,GO:0022414,GO:0031625,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032446,GO:0032501,GO:0032504,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0036297,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043240,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0046483,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051716,GO:0061630,GO:0061659,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564
EggNOG free text desc.protein monoubiquitination
EggNOG OGsKOG3268@1,KOG3268@2759
EC2.3.2.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03400,ko04121
Hectar predicted targeting categoryother localisation
Exons3
Model size447
Cds size435
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114620.1165.1prot_H-elongata_contig114620.1165.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig114620 457..1935 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929662.5431614-UTR-H-elongata_contig114620:444..4561622929662.5431614-UTR-H-elongata_contig114620:444..456Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig114620 445..456 +
1691679110.2247906-UTR-H-elongata_contig114620:444..4561691679110.2247906-UTR-H-elongata_contig114620:444..456Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig114620 445..456 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929662.556296-CDS-H-elongata_contig114620:456..6131622929662.556296-CDS-H-elongata_contig114620:456..613Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig114620 457..613 +
1691679110.2469893-CDS-H-elongata_contig114620:456..6131691679110.2469893-CDS-H-elongata_contig114620:456..613Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig114620 457..613 +
1622929662.6218562-CDS-H-elongata_contig114620:702..7981622929662.6218562-CDS-H-elongata_contig114620:702..798Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig114620 703..798 +
1691679110.2623959-CDS-H-elongata_contig114620:702..7981691679110.2623959-CDS-H-elongata_contig114620:702..798Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig114620 703..798 +
1622929662.6353467-CDS-H-elongata_contig114620:1753..19351622929662.6353467-CDS-H-elongata_contig114620:1753..1935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig114620 1754..1935 +
1691679110.2705903-CDS-H-elongata_contig114620:1753..19351691679110.2705903-CDS-H-elongata_contig114620:1753..1935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig114620 1754..1935 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig114620.1165.1

>prot_H-elongata_contig114620.1165.1 ID=prot_H-elongata_contig114620.1165.1|Name=mRNA_H-elongata_contig114620.1165.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
MLRANLEATLELKLPSPATSAAEDYSADCGICYSYRLQPPEGKPHGHGSR
RAGGRGLAPLSHTGPSSVKKHGTTGSREVRMGCSVAETGAIPDRVCDNPR
CRRPYHPMCLLSWLQGLPTSRVSFDTTFGQCPYCSDPISVKIAP*
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mRNA from alignment at H-elongata_contig114620:445..1935+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig114620.1165.1 ID=mRNA_H-elongata_contig114620.1165.1|Name=mRNA_H-elongata_contig114620.1165.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1491bp|location=Sequence derived from alignment at H-elongata_contig114620:445..1935+ (Himanthalia elongata Himel1 dioecious)
GATCACGCGCGCATGCTTCGGGCCAACCTGGAAGCCACTCTGGAGCTGAA
GCTGCCTTCCCCGGCAACCTCTGCCGCGGAGGACTACAGCGCGGACTGTG
GGATTTGCTACTCTTACCGCCTCCAGCCTCCAGAAGGGAAACCCCATGGT
CACGGCAGCAGGAGGGCGGGTGAGATCCGAATATATTTCGACGACCGCTC
CACCTACTGTCGTGTAATGCGTCTGTAGATTATCGAGATAGTGGTGAGTC
TAGCTGAGGAGGCAGAGGGCTTGCACCTCTTTCACATACCGGACCGTCAA
GTGTCAAAAAGCATGGTACGACCGGATCACGGGAAGTGCGGATGGGATGC
TCAGGTTTCTTCCTGACCTCGCGATGACCTTGGTCAATTCAACTAAACCC
GCGCAGATAACGTCTGGTCGTGGTCTAGCCCAGCTGGTGTATCGGCAGTG
GATGCAACTAGAACGGGAGAAAAAAAACAAAAAACATAAAACTAGAATGC
TATGTATGTACAATGCTTTACGCAAGACAAAAACCCCCAATGTACTTAAA
AATAGAGAGATATGGGAAAAACATGGCACGAAAAAAGTGACTGCAGCAAA
GGAAATGCACACACACACGGGGATGAAAAGGTTTTCGACTCTCGACATCT
CCCCCCTCCCTATATCGCTTGTCCAAAAAGGGTGCACACCTAGGGCTGAA
GGGTTCAGAGGGAAGTATTGTATTTAATAGTAGCCCTCGACAATCGGGCA
TTACACAAATACGTCCATTTTCAATGCCTGCTCCAGTTCCAGCTTCCTCC
TAGCCTCATCCCTGGGGGGTTCGGCATTTACATTACATCTATGCTCCCGC
GCTGTCATGCCCGCTGCCTCGATGAAGCTTATCCTTGCTCATTCGATGTG
GTCAGAGGTAGTCTTGGCCCGGCGAACCATATCCTGCTTATGTGTGTATG
TGTGCGTGTGTGTGGGTGTTTTATTAATTTGCGCATAACCGCGCAATCCG
GCCCTGTCATGCTAGTCCTTCTAGGCTACTCTCGCATTGATCCTCCCAGT
GGGGGATTCAAGTGTTTGTGTGTGTGTGTACCGTTTGAGAAGAGCCAGTC
TCAAACGTGAGGAATCGGAGCGATCCTTTGAACTATCTGCTGCGTTTGGA
AGTTATGCCTTGAAATATTTTTGGCTGTTGAGAACGCGCCAACAGCGCTG
GGCCAAAACAACAACCAAGATGCCGGAGGAAACGCCCCAAAGCTCACACG
CCCCCACCCCCGCCCCTGAAACATGACAACAAAACGAACCGACGCAGGCC
TTCTCGGAGTGGCCGAGACGGGGGCAATTCCAGATCGCGTCTGTGACAAC
CCTAGGTGTCGAAGGCCGTACCACCCCATGTGCCTCTTGTCGTGGCTGCA
GGGACTGCCGACGAGCCGCGTCTCCTTCGATACGACCTTCGGGCAGTGTC
CTTACTGTTCTGATCCCATCAGCGTCAAGATCGCGCCGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig114620:445..1935+

>mRNA_H-elongata_contig114620.1165.1 ID=mRNA_H-elongata_contig114620.1165.1|Name=mRNA_H-elongata_contig114620.1165.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig114620:445..1935+ (Himanthalia elongata Himel1 dioecious)
ATGCTTCGGGCCAACCTGGAAGCCACTCTGGAGCTGAAGCTGCCTTCCCC
GGCAACCTCTGCCGCGGAGGACTACAGCGCGGACTGTGGGATTTGCTACT
CTTACCGCCTCCAGCCTCCAGAAGGGAAACCCCATGGTCACGGCAGCAGG
AGGGCGGATGCTTCGGGCCAACCTGGAAGCCACTCTGGAGCTGAAGCTGC
CTTCCCCGGCAACCTCTGCCGCGGAGGACTACAGCGCGGACTGTGGGATT
TGCTACTCTTACCGCCTCCAGCCTCCAGAAGGGAAACCCCATGGTCACGG
CAGCAGGAGGGCGGGAGGCAGAGGGCTTGCACCTCTTTCACATACCGGAC
CGTCAAGTGTCAAAAAGCATGGTACGACCGGATCACGGGAAGTGCGGATG
GGATGCTCAGGAGGCAGAGGGCTTGCACCTCTTTCACATACCGGACCGTC
AAGTGTCAAAAAGCATGGTACGACCGGATCACGGGAAGTGCGGATGGGAT
GCTCAGTGGCCGAGACGGGGGCAATTCCAGATCGCGTCTGTGACAACCCT
AGGTGTCGAAGGCCGTACCACCCCATGTGCCTCTTGTCGTGGCTGCAGGG
ACTGCCGACGAGCCGCGTCTCCTTCGATACGACCTTCGGGCAGTGTCCTT
ACTGTTCTGATCCCATCAGCGTCAAGATCGCGCCGTAATGGCCGAGACGG
GGGCAATTCCAGATCGCGTCTGTGACAACCCTAGGTGTCGAAGGCCGTAC
CACCCCATGTGCCTCTTGTCGTGGCTGCAGGGACTGCCGACGAGCCGCGT
CTCCTTCGATACGACCTTCGGGCAGTGTCCTTACTGTTCTGATCCCATCA
GCGTCAAGATCGCGCCGTAA
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