mRNA_H-elongata_contig11450.1154.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: D7G711_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G711_ECTSI) HSP 1 Score: 254 bits (650), Expect = 8.980e-82 Identity = 135/183 (73.77%), Postives = 151/183 (82.51%), Query Frame = 1
Query: 1 AGAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPVP--LSPTAKCRYFKGKKRAEEAIAKSFPTTGVIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVS 543
AGA V+SVS++GSKP KWA G+SWV+KVSW KGDPTAGDLS +F A+AVISCVGVIGGSD EME+GNGDVNV AA QA K GRFVY+ +S H VP A YF GK RAEEAIAKSFP+TGV+IKPTFIYGG SFGLTPPRVSDGYG+GID+LLSSGPIRA+AGISPGLIKV+
Sbjct: 123 AGATVTSVSRSGSKPDKWAAGQSWVDKVSWTKGDPTAGDLSAVFGKAAAVISCVGVIGGSDEEMEKGNGDVNVQAAKQAASGKAGRFVYVSVS----HLVPEAFGGAAFKGYFDGKSRAEEAIAKSFPSTGVLIKPTFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVA 301
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: A0A7S0MWV8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWV8_9CHLO) HSP 1 Score: 153 bits (386), Expect = 3.300e-42 Identity = 92/172 (53.49%), Postives = 110/172 (63.95%), Query Frame = 1
Query: 4 GAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPVPLSPTAKCRYFKGKKRAEEAIAKSFPTTGVIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGI 519
GA+V SVSK+G KP A +KV+W K D D S FSGA AVISCVGVIGGSD M+ GNG NVAAA A AKV +FVY+ ++ P + A YF GK+ AE AIA FP T V++ P+FIYGG SF L PPRV GYG I+ LLSSG +RA++GI
Sbjct: 117 GAEVVSVSKSG-KPAAIAG----ADKVTWTKADVLTADFSETFSGADAVISCVGVIGGSDEYMQTGNGATNVAAAKAAAAAKVPKFVYVSVAS--IVPAAVDGIALKGYFAGKREAEAAIAAEFPGTSVVVGPSFIYGGDSFVLNPPRVPAGYGGAIEGLLSSGVMRALSGI 281
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: A0A061RK23_9CHLO (Nad-binding rossmann-fold superfamily protein isoform 1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK23_9CHLO) HSP 1 Score: 143 bits (361), Expect = 1.970e-38 Identity = 80/187 (42.78%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 4 GAKVSSVSKTGSKPTKWADGES--WVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPVP--LSPTAKCRYFKGKKRAEEAIAKSFPTTGVIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVSTLE 552
G +V SVS+ G P D E+ W K+SW K D DLS +F + VISC+GVIGGS ME GNG N+AA +++ A V +FVY+ ++ V L ++ YF GK+ AE A+ ++FP + V+++P+F+YGG FGL+PPRV+ YG+ +++LLSS P++ +A I PG + + TLE
Sbjct: 110 GFRVISVSRRGKVPEP-TDEEAPVWKSKISWIKADVLKDDLSAIFEDSKTVISCIGVIGGSYENMETGNGAANIAAVKKSKSAGVEKFVYISVASIVPDSVEGLLGSSSLEGYFAGKREAEAAVLEAFPDSAVVVRPSFVYGGSEFGLSPPRVAGAYGSAVEALLSSSPVKNIARIMPGPVAL-TLE 294
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: R1E7I8_EMIHU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E7I8_EMIHU) HSP 1 Score: 129 bits (325), Expect = 1.200e-33 Identity = 76/181 (41.99%), Postives = 101/181 (55.80%), Query Frame = 1
Query: 4 GAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGA-SAVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPVPLSPTAKCRYFKGKKRAEEAIAKSFPTTGVIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVS 543
G V+SVS +G+ P W G+ W + V W K + T G + G+ AV+S VG IG + GNG NV AA A A R+VY+ ++ A P YF GK AE AIA F ++P+FIYGG SFGL PPRVS GYG+ ++ LLS P+ A+A + PGL+KV+
Sbjct: 40 GVSVTSVSTSGAAPD-WCAGQEWAQSVEWRKNELTRGSRESVAIGSPDAVVSAVGAIGFDRQGLLLGNGVANVEAARAAAAAGAKRYVYIGVASEVADARDWLPGFFAGYFDGKADAEAAIADGFEGASTFVRPSFIYGGDSFGLFPPRVSAGYGSAVEELLSFPPLEALANVLPGLLKVA 219
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: A0A7S3VWQ3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VWQ3_EMIHU) HSP 1 Score: 128 bits (321), Expect = 6.360e-33 Identity = 75/183 (40.98%), Postives = 100/183 (54.64%), Query Frame = 1
Query: 4 GAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAGD---LSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPVPLSPTAKCRYFKGKKRAEEAIAKSFPTTGVIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVS 543
G V+SVS +G+ P W G+ W + V W K + T G ++ AV+S VG IG + GNG NV AA A A R+VY+ ++ A P YF GK AE AIA F ++P+FIYGG SFGL PPRVS GYG+ ++ LLS P+ A+A + PGL+KV+
Sbjct: 45 GVSVTSVSTSGAAPD-WCAGQEWAQSVEWRKNELTRGSRESVAEAIGSPDAVVSAVGAIGFDRQGLLLGNGVANVEAARAAAAAGAKRYVYIGVASEVADARDWLPGFFAGYFDGKADAEAAIADGFEGASTFVRPSFIYGGDSFGLFPPRVSAGYGSAVEELLSFPPLEALANVLPGLLKVA 226
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: A0A7S4QFS6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFS6_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.240e-32 Identity = 82/188 (43.62%), Postives = 114/188 (60.64%), Query Frame = 1
Query: 4 GAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGAS---AVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAK-VGRFVYLFLSGNPAH-PVPLSPTAKCRYFKGKKRAEEAIAKSFPTTG---VIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVS 543
GA V+SVSK+G+ P+ W GE+W + VSW D GD S L S A++SCVGV+G E+ +GNG+ NVA A K+ + R V++ +S A P YF+GK+ AE+A ++ I+KPTFIYGGGSFGL PPRV+ YG+ ++ LLS+ IR +A ++PGLIKV+
Sbjct: 73 GADVTSVSKSGTIPS-WCAGEAWTDGVSWKSADLLGGDESSLASAIGTPEAIVSCVGVVGFDREELLKGNGNANVAGFNAAAKSGGLKRSVFVSVSSEVAACEEKWLPEFFGGYFEGKRMAEKAALEAVEGNADSVCIVKPTFIYGGGSFGLFPPRVNAAYGSAVEELLSNKLIRVLADVTPGLIKVA 259
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: A0A7S3BTM0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BTM0_9EUKA) HSP 1 Score: 120 bits (300), Expect = 8.530e-30 Identity = 79/185 (42.70%), Postives = 102/185 (55.14%), Query Frame = 1
Query: 4 GAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAG---DLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPV-PLSPTAKCRYFKGKKRAEEAIAKSFPTTGV-IIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVS 543
GA VSSVSK+G+ P D E W KV W D T G +L+ A++S VG IG + GNG NV A A+ A V R VY+ +SG P YF+GK AE AI ++ + G +KPTFIYGG SF + PPRV+ YGAG++ LLS+ P R +A PGL+KV+
Sbjct: 49 GATVSSVSKSGAVPGDCLD-EPWTTKVQWVANDLTRGARENLAAAIGDPDAIVSTVGAIGFDRQGLLLGNGVANVEVARAAQAAGVSRIVYVSVSGEVVEASKPFGQQQLPGYFEGKAMAEAAIIEAVGSDGACFVKPTFIYGGESFAIAPPRVTAWYGAGVEELLSTPPFRFIAPKLPGLLKVA 232
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: A0A7S0Z5L6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z5L6_9CHLO) HSP 1 Score: 114 bits (285), Expect = 5.150e-28 Identity = 72/184 (39.13%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 4 GAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPVPLSPTAKCRYFKGKKRAEEAIAKSFPT-TGVIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVSTLE 552
G V+SVSK+G++ + AD V+ + + D++ GA +SCVGVIG + M GNGD+NV A A+ V RFVY+ ++ V +P + YF+GK R E+A+A +F ++KP+FIYGG +F LTPPRV+ YG + +L SGP++++A SPG IK++ E
Sbjct: 46 GCAVTSVSKSGARVS-GADAS-----VACDFEAQSVDDVAEALRGADVCVSCVGVIGTDNDAMRVGNGDINVKAIEAAKAEGVKRFVYVSVASVVKDVVGATPLMR-GYFEGKTRTEDALAANFGAGNSFVVKPSFIYGGDAFSLTPPRVTKTYGDLLSKILGSGPVKSIAAKSPGPIKLTLAE 222
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: A0A7S2UCX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCX9_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.180e-27 Identity = 73/186 (39.25%), Postives = 103/186 (55.38%), Query Frame = 1
Query: 4 GAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGAS--AVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPVPLSPTAKCRYFKGKKRAE----EAIAKSFPTTGVIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVS 543
GAKV+SVS++G P W E W ++V+W D + D + L G A++SC+GV+G E+ +GNG+ NVAA K FV + + P YF+GK+ E EA+ II+P+FIYGG SFGL PPRV+ YG+G++ LLS P +A ++PGLIKV+
Sbjct: 69 GAKVTSVSRSGKIPD-WCANEPWTKEVTWTAVDLLSSDGTSLDLGKDNDAIVSCLGVVGTDREELLKGNGNANVAAFGGDTDVKRSVFVSVSSEVSGLDGTFWVPEFLSGYFEGKRMGEAAALEAVGGDSSKACTIIRPSFIYGGDSFGLFPPRVNGAYGSGVEELLSLAPFCILADLTPGLIKVA 253
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Match: A0A830HE93_9CHLO (NAD(P)-bd_dom domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HE93_9CHLO) HSP 1 Score: 112 bits (280), Expect = 5.930e-27 Identity = 67/146 (45.89%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 118 LSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAALQAEKAKVGRFVYLFLSGNPAHPVP-LSPTAKCRYFKGKKRAEEAIAKSFPTTGVIIKPTFIYGGGSFGLTPPRVSDGYGAGIDSLLSSGPIRAVAGISPGLIKVSTLE 552
L G+ V+SCVG IGG D GNG NVA A++A RFVY+ ++ V L P YF GK+ AE ++ +F I++P+FI+GG F LTPPRV GYG G+ LLSSGPIR +A +PGLIK+ TLE
Sbjct: 103 LVDALKGSDVVVSCVGTIGGDDLA---GNGTANVAIVEAAKEAGAKRFVYVSVASIVKDNVKGLGPLDA--YFNGKEAAEASVTSTFADNHAIVRPSFIFGGDQFNLTPPRVPTGYGKGVARLLSSGPIRTIANNTPGLIKL-TLE 242 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11450.1154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11450.1154.1 >prot_H-elongata_contig11450.1154.1 ID=prot_H-elongata_contig11450.1154.1|Name=mRNA_H-elongata_contig11450.1154.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp AGAKVSSVSKTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVback to top mRNA from alignment at H-elongata_contig11450:6923..8052+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11450.1154.1 ID=mRNA_H-elongata_contig11450.1154.1|Name=mRNA_H-elongata_contig11450.1154.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1130bp|location=Sequence derived from alignment at H-elongata_contig11450:6923..8052+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11450:6923..8052+ >mRNA_H-elongata_contig11450.1154.1 ID=mRNA_H-elongata_contig11450.1154.1|Name=mRNA_H-elongata_contig11450.1154.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1116bp|location=Sequence derived from alignment at H-elongata_contig11450:6923..8052+ (Himanthalia elongata Himel1 dioecious)back to top |